SRR1545026_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545026_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2415221
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12930	0.5353547356535903	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	7105	0.2941759780988986	No Hit
AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	2696	0.11162539577123584	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCCGATT	25	3.8920858E-5	45.000004	28
ACGTTAT	20	7.034831E-4	45.000004	38
CGTTAGT	25	3.8920858E-5	45.000004	20
AATGCGT	20	7.034831E-4	45.000004	22
ATATCCG	20	7.034831E-4	45.000004	1
TATTACG	80	0.0	45.000004	1
TATACGC	20	7.034831E-4	45.000004	34
TAGCTAC	25	3.8920858E-5	45.000004	38
TTGATCG	65	0.0	44.999996	20
CGTATTA	30	2.1665E-6	44.999996	36
TCCGAAC	55	1.8189894E-12	44.999996	35
TCGAATA	60	0.0	44.999996	28
TACGTCG	60	0.0	44.999996	1
CGTTTTT	12500	0.0	42.587997	1
CGGGTAT	265	0.0	42.45283	6
ATTAACG	75	0.0	42.0	1
CGGTCTA	345	0.0	41.739132	31
TAGGGTA	955	0.0	41.46597	5
TAGCCGT	185	0.0	41.351353	44
CGAACGT	55	6.184564E-11	40.90909	37