##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545026_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2415221 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.956803538889403 31.0 31.0 33.0 30.0 34.0 2 31.235033564216277 31.0 31.0 34.0 30.0 34.0 3 31.323468121550782 31.0 31.0 34.0 28.0 34.0 4 35.16733872386833 35.0 35.0 37.0 32.0 37.0 5 35.03099012471323 35.0 35.0 37.0 32.0 37.0 6 35.082709201352586 37.0 35.0 37.0 32.0 37.0 7 35.586637413305034 37.0 35.0 37.0 35.0 37.0 8 35.51780230463382 37.0 35.0 37.0 35.0 37.0 9 37.21808811698805 39.0 37.0 39.0 34.0 39.0 10 36.64264512440062 39.0 35.0 39.0 32.0 39.0 11 36.29558827121824 38.0 35.0 39.0 32.0 39.0 12 35.23929487198066 37.0 35.0 39.0 30.0 39.0 13 34.64765294770127 37.0 33.0 39.0 27.0 39.0 14 35.57345352661309 37.0 33.0 40.0 27.0 41.0 15 36.036225670445894 37.0 34.0 40.0 30.0 41.0 16 36.196234630288494 37.0 34.0 40.0 31.0 41.0 17 36.125571531549284 37.0 34.0 40.0 31.0 41.0 18 36.07636444035556 37.0 35.0 40.0 31.0 41.0 19 35.94705163626848 37.0 34.0 40.0 30.0 41.0 20 35.77539115468108 36.0 34.0 40.0 30.0 41.0 21 35.55888715773836 36.0 34.0 40.0 30.0 41.0 22 35.456385978757226 35.0 34.0 40.0 30.0 41.0 23 35.45491820417262 35.0 34.0 40.0 30.0 41.0 24 35.369051941830584 35.0 34.0 40.0 29.0 41.0 25 35.21665802011493 35.0 34.0 40.0 29.0 41.0 26 35.066117758995965 35.0 34.0 40.0 29.0 41.0 27 34.96611241786984 35.0 34.0 40.0 29.0 41.0 28 35.00978254163905 36.0 34.0 40.0 29.0 41.0 29 35.075786025378214 36.0 34.0 40.0 29.0 41.0 30 34.96241089324745 36.0 34.0 40.0 29.0 41.0 31 34.74984401013406 35.0 34.0 40.0 27.0 41.0 32 34.49165604307018 35.0 33.0 40.0 26.0 41.0 33 34.24090963104412 35.0 33.0 40.0 25.0 41.0 34 34.074298376835905 35.0 33.0 40.0 24.0 41.0 35 33.88277884301271 35.0 33.0 40.0 23.0 41.0 36 33.653076467950555 35.0 33.0 40.0 23.0 41.0 37 33.589659082957624 35.0 33.0 40.0 23.0 41.0 38 33.585312896832214 35.0 33.0 39.0 23.0 41.0 39 33.5646862129801 35.0 33.0 39.0 23.0 41.0 40 33.370769797049626 35.0 32.0 39.0 22.0 41.0 41 33.35553847867338 35.0 32.0 39.0 22.0 41.0 42 33.332609314013084 35.0 32.0 39.0 23.0 41.0 43 33.209861954661704 35.0 32.0 39.0 22.0 41.0 44 33.132690134774414 35.0 32.0 39.0 22.0 41.0 45 33.081307673293665 35.0 32.0 39.0 22.0 41.0 46 33.04047952547614 35.0 32.0 39.0 22.0 41.0 47 32.95576512459937 35.0 32.0 39.0 22.0 40.0 48 32.96196621344382 35.0 32.0 39.0 22.0 40.0 49 32.97940850961465 35.0 32.0 39.0 22.0 40.0 50 32.849904418684666 35.0 32.0 38.0 21.0 40.0 51 32.63969384168157 35.0 31.0 38.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 4.0 12 5.0 13 20.0 14 30.0 15 91.0 16 317.0 17 889.0 18 1952.0 19 3703.0 20 6501.0 21 10113.0 22 14832.0 23 21251.0 24 29682.0 25 40562.0 26 52077.0 27 60504.0 28 64955.0 29 71760.0 30 83217.0 31 101010.0 32 124998.0 33 159620.0 34 265459.0 35 358567.0 36 163296.0 37 193046.0 38 256307.0 39 330296.0 40 155.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.43563259842474 23.38829448733677 28.339891049307703 16.836181864930786 2 31.319494158091537 25.890715590829988 30.200466127116314 12.589324123962156 3 28.209302585560494 25.441605550796385 33.54115420493611 12.807937658707008 4 26.555540880109934 27.584308019845803 31.442298655071315 14.417852444972945 5 22.90204498884367 32.341760857495025 31.2721692963087 13.484024857352598 6 20.626062790941287 39.98106177447116 28.826927225293254 10.565948209294303 7 84.34987936921713 4.825024293843089 8.860058768949095 1.9650375679906726 8 86.43627229143834 3.6156525634714174 8.27771040414107 1.670364740949172 9 82.06851464110323 5.3272971707351005 9.992004872431965 2.612183315729699 10 54.76273185766437 20.606271641394308 14.649922305246601 9.98107419569472 11 49.7511821899528 19.004347842288553 19.262667888363012 11.981802079395633 12 42.62963927524645 21.212799988075627 23.89847554323186 12.259085193446067 13 21.110117873271225 42.274723513914466 23.633406632353726 12.981751980460587 14 14.85685988984031 43.873334986736204 28.340512110485953 12.929293012937531 15 13.793147707808107 21.609865101371675 50.586178242073906 14.010808948746305 16 15.137745158724606 16.21470664589286 49.34024671034245 19.307301485040085 17 15.071084592258845 17.102824130793827 30.57020454856926 37.255886728378066 18 21.010955105143587 21.313287686716865 36.89124100858679 20.78451619955275 19 30.05538623587655 21.385082358922848 27.09855537029531 21.460976034905293 20 31.715772593895135 20.930134343813673 27.31700328872596 20.037089773565235 21 21.947349745634043 26.91749533479545 30.57202632802547 20.563128591545038 22 22.957360837786688 23.166492838543554 26.322891362736577 27.55325496093318 23 18.36800855905112 28.57775748057838 26.35373740125645 26.70049655911405 24 19.292023380055078 21.87489260817126 41.16277558037132 17.670308431402344 25 16.975962034116133 23.248969763015477 38.597668701953154 21.177399500915236 26 15.17981170253157 33.285359807653215 29.246102116535088 22.288726373280127 27 16.8642538301878 34.997625476095145 30.050500554607634 18.087620139109422 28 14.780013920051207 28.811897544779548 39.98930118610264 16.41878734906661 29 15.509885016733458 23.379475418605587 39.04694435830096 22.06369520636 30 17.676519043184868 30.59040973890174 32.91495892094346 18.818112296969925 31 29.408323296294625 26.25867363690528 26.11032282346005 18.22268024334005 32 30.51397780989814 25.111201003966098 28.133988566677747 16.24083261945801 33 29.01589543979619 27.172834287214297 24.603794021333865 19.207476251655645 34 20.01965865649562 28.349496795531344 28.10546115655669 23.525383391416355 35 20.467112533387212 25.709034494151883 31.57412924117503 22.249723731285876 36 31.58489430159807 25.342028741883247 25.49037955532848 17.5826974011902 37 20.344846289428588 32.29195175099918 29.431799408832564 17.931402550739666 38 21.535254951824285 32.36879772078829 24.04682635667709 22.04912097071034 39 20.94992549336065 31.51144346625009 27.359442469239877 20.17918857114939 40 24.21832205003186 25.662372097625845 26.19532539672353 23.92398045561876 41 17.171803325658395 24.356653076467953 29.12872155384538 29.34282204402827 42 22.71754841482415 25.085944516050496 25.01431546015872 27.182191608966633 43 22.94456697751469 25.61873219883398 26.46424488690683 24.972455936744506 44 18.874380439719594 30.366165249474065 29.133690043271404 21.62576426753494 45 17.30562130753252 38.257244368113724 23.951431359697516 20.485702964656234 46 22.28744284684507 33.038218862787296 25.931581416359002 18.74275687400863 47 22.27849956587824 28.14512626380774 26.54862639899206 23.027747771321962 48 23.73194833930311 25.805050552309705 30.79937612334441 19.663624985042777 49 22.00274840273416 24.588350300034655 32.12699790205534 21.281903395175846 50 20.59612764214952 33.682756153577664 26.31755023660361 19.403565967669213 51 19.220642748634596 33.832224877143744 24.413211047767472 22.533921326454184 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2550.0 1 3525.0 2 4500.0 3 14661.5 4 24823.0 5 19113.5 6 13404.0 7 14169.5 8 14935.0 9 15643.0 10 16351.0 11 16460.0 12 16569.0 13 16147.0 14 15725.0 15 14493.0 16 13261.0 17 13093.5 18 12926.0 19 11607.0 20 10288.0 21 10229.5 22 10171.0 23 10657.5 24 11144.0 25 12008.5 26 14992.5 27 17112.0 28 20515.0 29 23918.0 30 27701.0 31 31484.0 32 39288.5 33 47093.0 34 50292.5 35 53492.0 36 55747.0 37 58002.0 38 69253.5 39 80505.0 40 124743.0 41 168981.0 42 206902.0 43 244823.0 44 246327.5 45 247832.0 46 233589.0 47 219346.0 48 208373.0 49 197400.0 50 181103.0 51 164806.0 52 157714.5 53 150623.0 54 138593.0 55 126563.0 56 113609.5 57 100656.0 58 96557.5 59 92459.0 60 82468.5 61 72478.0 62 62450.0 63 52422.0 64 43158.5 65 33895.0 66 27073.0 67 20251.0 68 16264.0 69 12277.0 70 10194.5 71 8112.0 72 6654.5 73 5197.0 74 4095.5 75 2220.0 76 1446.0 77 1159.0 78 872.0 79 624.0 80 376.0 81 254.5 82 133.0 83 97.0 84 61.0 85 55.0 86 49.0 87 38.5 88 28.0 89 17.5 90 7.0 91 4.5 92 2.0 93 3.0 94 4.0 95 3.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2415221.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.993515996072864 #Duplication Level Percentage of deduplicated Percentage of total 1 82.46168647672772 13.1885230172869 2 6.20184880424675 1.983787361118915 3 2.1762995478265323 1.0442004489122934 4 1.1472663370207181 0.7339529005158709 5 0.7142059098852319 0.5711331822119614 6 0.49609049653717213 0.47605387751201944 7 0.39699023862544813 0.4444488812218621 8 0.28516236270942813 0.3648599047576936 9 0.25378617415132965 0.36530399122842816 >10 3.0383158154940624 11.484751692541487 >50 1.0068183061948104 11.647117904380293 >100 1.7970620004488693 54.175427376745056 >500 0.021864601394530725 2.1693383828093102 >1k 0.0020823429899553074 0.5170443813949652 >5k 2.6029287374441343E-4 0.2957810249445433 >10k+ 2.6029287374441343E-4 0.5382756724184299 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12930 0.5353547356535903 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 7105 0.2941759780988986 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2696 0.11162539577123584 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.140407855016166E-5 0.0 0.0 0.00972995845928799 0.0 2 4.140407855016166E-5 0.0 0.0 0.03461380966793515 0.0 3 4.140407855016166E-5 0.0 0.0 0.04778030664688656 0.0 4 4.140407855016166E-5 0.0 0.0 0.06715741540836222 0.0 5 4.140407855016166E-5 0.0 0.0 0.11042467749328115 0.0 6 4.140407855016166E-5 0.0 0.0 0.17066761178376638 0.0 7 4.140407855016166E-5 0.0 0.0 0.2127341555907306 0.0 8 4.140407855016166E-5 0.0 0.0 0.3307771835372415 0.0 9 4.140407855016166E-5 0.0 0.0 0.3801308451690342 0.0 10 4.140407855016166E-5 0.0 0.0 0.4611586268917006 0.0 11 4.140407855016166E-5 0.0 0.0 0.528605870849914 0.0 12 4.140407855016166E-5 0.0 0.0 0.6025949592190528 0.0 13 4.140407855016166E-5 0.0 0.0 0.6333995936603731 0.0 14 4.140407855016166E-5 0.0 0.0 0.6437506132979135 0.0 15 4.140407855016166E-5 0.0 0.0 0.6603122447179782 0.0 16 8.280815710032332E-5 0.0 0.0 0.6969962583134214 0.0 17 8.280815710032332E-5 0.0 0.0 0.7371996185856284 0.0 18 8.280815710032332E-5 0.0 0.0 0.8122652129970714 0.0 19 8.280815710032332E-5 0.0 0.0 0.8353272847495116 0.0 20 8.280815710032332E-5 0.0 0.0 0.8641031193418739 0.0 21 8.280815710032332E-5 0.0 0.0 0.8955702190399968 0.0 22 8.280815710032332E-5 0.0 0.0 0.9271201268952199 0.0 23 8.280815710032332E-5 0.0 0.0 0.9660399607323719 0.0 24 8.280815710032332E-5 0.0 0.0 0.998335142001498 0.0 25 8.280815710032332E-5 0.0 0.0 1.0240884788596984 0.0 26 8.280815710032332E-5 0.0 0.0 1.0507113013674525 0.0 27 8.280815710032332E-5 0.0 0.0 1.0781208013676595 0.0 28 8.280815710032332E-5 0.0 0.0 1.1057787258391676 0.0 29 8.280815710032332E-5 0.0 0.0 1.13716301738019 0.0 30 8.280815710032332E-5 0.0 0.0 1.1802646631509084 0.0 31 8.280815710032332E-5 0.0 0.0 1.21906028475241 0.0 32 8.280815710032332E-5 0.0 0.0 1.2578973104324616 0.0 33 8.280815710032332E-5 0.0 0.0 1.2976866299191667 0.0 34 8.280815710032332E-5 0.0 0.0 1.338718071762377 0.0 35 1.2421223565048497E-4 0.0 0.0 1.388899814965173 0.0 36 1.6561631420064664E-4 0.0 0.0 1.4284821140591275 0.0 37 1.6561631420064664E-4 0.0 0.0 1.471625163908396 0.0 38 1.6561631420064664E-4 0.0 0.0 1.514436981129263 0.0 39 1.6561631420064664E-4 0.0 0.0 1.5619688633048487 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGATT 25 3.8920858E-5 45.000004 28 ACGTTAT 20 7.034831E-4 45.000004 38 CGTTAGT 25 3.8920858E-5 45.000004 20 AATGCGT 20 7.034831E-4 45.000004 22 ATATCCG 20 7.034831E-4 45.000004 1 TATTACG 80 0.0 45.000004 1 TATACGC 20 7.034831E-4 45.000004 34 TAGCTAC 25 3.8920858E-5 45.000004 38 TTGATCG 65 0.0 44.999996 20 CGTATTA 30 2.1665E-6 44.999996 36 TCCGAAC 55 1.8189894E-12 44.999996 35 TCGAATA 60 0.0 44.999996 28 TACGTCG 60 0.0 44.999996 1 CGTTTTT 12500 0.0 42.587997 1 CGGGTAT 265 0.0 42.45283 6 ATTAACG 75 0.0 42.0 1 CGGTCTA 345 0.0 41.739132 31 TAGGGTA 955 0.0 41.46597 5 TAGCCGT 185 0.0 41.351353 44 CGAACGT 55 6.184564E-11 40.90909 37 >>END_MODULE