##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545025_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2691754 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.961204478566763 31.0 31.0 33.0 30.0 34.0 2 31.23766473459313 31.0 31.0 34.0 28.0 34.0 3 31.30706520729606 31.0 31.0 34.0 28.0 34.0 4 35.13319642136688 35.0 35.0 37.0 32.0 37.0 5 34.97917826071773 35.0 35.0 37.0 32.0 37.0 6 35.05088986586441 37.0 35.0 37.0 32.0 37.0 7 35.604934180463744 37.0 35.0 37.0 35.0 37.0 8 35.54768006288836 37.0 35.0 37.0 35.0 37.0 9 37.30090639783576 39.0 37.0 39.0 35.0 39.0 10 36.68177961284724 39.0 35.0 39.0 32.0 39.0 11 36.25521240053883 38.0 35.0 39.0 32.0 39.0 12 34.74785883108189 35.0 33.0 39.0 30.0 39.0 13 33.90965370535346 35.0 33.0 39.0 24.0 39.0 14 34.73084093122923 35.0 33.0 40.0 25.0 41.0 15 35.38045564342061 35.0 33.0 40.0 30.0 41.0 16 35.684079600141764 35.0 34.0 40.0 31.0 41.0 17 35.61686877775607 35.0 34.0 40.0 31.0 41.0 18 35.585457289187644 36.0 34.0 39.0 30.0 41.0 19 35.4584549702536 36.0 34.0 39.0 30.0 41.0 20 35.196010482384345 35.0 34.0 39.0 30.0 41.0 21 34.97029037571784 35.0 34.0 39.0 29.0 41.0 22 34.830081054955244 35.0 33.0 39.0 29.0 41.0 23 34.8471205020964 35.0 34.0 39.0 29.0 41.0 24 34.78094803611326 35.0 34.0 39.0 29.0 41.0 25 34.697868750264696 35.0 34.0 39.0 29.0 41.0 26 34.55417879939994 35.0 34.0 39.0 29.0 41.0 27 34.38504038630573 35.0 33.0 39.0 27.0 41.0 28 34.51042480107766 35.0 33.0 39.0 27.0 41.0 29 34.63281079920379 35.0 34.0 39.0 29.0 41.0 30 34.550677736524214 35.0 34.0 39.0 29.0 41.0 31 34.24447590678792 35.0 33.0 39.0 27.0 41.0 32 33.87665254700095 35.0 33.0 39.0 25.0 41.0 33 33.601246993596 35.0 33.0 39.0 23.0 41.0 34 33.448375297296856 35.0 33.0 38.0 23.0 41.0 35 33.24749549921724 35.0 33.0 38.0 23.0 41.0 36 32.975957312592456 35.0 32.0 38.0 21.0 41.0 37 32.91659527579415 35.0 32.0 38.0 22.0 41.0 38 32.97743478787437 35.0 32.0 38.0 23.0 41.0 39 32.920761332573484 35.0 32.0 38.0 22.0 41.0 40 32.70616854289062 35.0 31.0 38.0 21.0 41.0 41 32.74805944376789 35.0 32.0 38.0 21.0 41.0 42 32.723885986609474 35.0 32.0 38.0 21.0 40.0 43 32.54691513414673 35.0 32.0 38.0 20.0 40.0 44 32.52420763561604 35.0 31.0 38.0 20.0 40.0 45 32.51968159051682 35.0 31.0 38.0 20.0 40.0 46 32.50049484462547 35.0 32.0 38.0 20.0 40.0 47 32.426580586487475 35.0 31.0 38.0 20.0 40.0 48 32.450794166183094 35.0 32.0 38.0 20.0 40.0 49 32.511164838986026 35.0 32.0 38.0 20.0 40.0 50 32.340430812028146 35.0 31.0 38.0 20.0 40.0 51 32.13047663345164 35.0 31.0 37.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 1.0 12 5.0 13 12.0 14 34.0 15 111.0 16 341.0 17 1011.0 18 2359.0 19 4642.0 20 7973.0 21 12610.0 22 19643.0 23 28683.0 24 39593.0 25 53202.0 26 65889.0 27 73237.0 28 76721.0 29 84304.0 30 98419.0 31 119682.0 32 149223.0 33 193528.0 34 343894.0 35 473132.0 36 150572.0 37 166685.0 38 220919.0 39 305152.0 40 175.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.182084246925985 23.38464064695362 28.83424711173458 16.599027994385818 2 30.699239232114078 25.69506723125516 31.204337394873384 12.401356141757383 3 26.753930708378252 25.605423081009633 34.13391416897681 13.506732041635306 4 24.392905146607006 28.431312816847303 33.06397984362613 14.111802192919562 5 21.992760111065127 32.669441561153064 31.706017711871144 13.631780615910666 6 20.888981682575746 39.68847078893539 28.510740580305633 10.91180694818323 7 84.54999973994651 4.705964958164825 9.140656984256362 1.6033783176322949 8 86.58268920562577 4.098851529523129 7.871150186829852 1.4473090780212456 9 84.07711105843995 4.188569980763472 9.06453561506735 2.669783345729216 10 62.03746701964593 16.87865978837591 13.161343867233038 7.9225293247451285 11 59.57279157010633 15.771240611140541 16.27188071421088 8.384087104542242 12 50.206779668572985 20.215888970537428 19.907019735087232 9.670311625802357 13 20.43923776095438 50.401522575985766 20.10179979299743 9.057439870062419 14 10.963631892067403 52.601575032488114 27.03515997375689 9.399633101687598 15 8.932428446284467 20.745506461586015 59.893920469701165 10.42814462242835 16 10.583285099604199 13.812629237292859 57.83477984986741 17.769305813235533 17 11.789784653426723 13.852566022006469 31.335330048734022 43.022319275832785 18 19.330035359843436 20.20504102529429 39.561304636307774 20.9036189785545 19 31.684804777851173 20.03455739268893 27.83839087821547 20.44224695124443 20 33.99073615196634 20.124535897411132 25.493302879832257 20.391425070790273 21 20.445516195016335 28.262872461599386 30.320229857557564 20.971381485826715 22 20.631231531558978 23.112067447471055 25.967417527753277 30.28928349321669 23 16.207981858669104 31.333101018889543 25.168607532486252 27.290309589955097 24 15.996706979909753 21.672559973905493 46.42604784835464 15.904685197830112 25 12.585919812880375 22.884892155821074 44.50700175424649 20.022186277052064 26 12.20798780274869 37.312696479693166 30.591911445102337 19.887404272455804 27 14.071976859698173 39.40627561062415 30.01184357857367 16.509903951104 28 10.32828408539562 29.944638328762586 44.77716017139753 14.949917414444261 29 10.96463495549742 23.85730642547573 44.28996854838889 20.888090070637954 30 15.434285599649893 32.288426059736516 34.431452502717555 17.845835837896036 31 31.234949404737577 26.451525659477053 25.266610544648582 17.046914391136784 32 33.19448954102047 25.671885320872562 28.088227973284337 13.045397164822639 33 30.64139590764981 26.535522934116564 24.707198354678773 18.115882803554857 34 18.020703229195536 27.6738884756928 28.7991027411866 25.506305553925063 35 18.521937740224402 25.25840028472141 33.773925849093196 22.44573612596099 36 34.37138014840881 22.9202594293535 25.84697561515651 16.86138480708118 37 19.129682727322038 34.59699511916765 29.501507195679842 16.77181495783047 38 19.59807619864222 35.340599475286375 23.052923855597502 22.008400470473898 39 19.56248602212535 33.13378562825577 27.210473171025285 20.093255178593587 40 24.26016641936819 24.378007797146395 25.43033278672568 25.931492996759737 41 15.617771906348054 23.147360420008663 27.85176505728235 33.38310261636093 42 22.439271939412 23.464217012401576 24.62279242456777 29.47371862361865 43 21.944278711947675 24.53812644097492 26.0932091119768 27.42438573510061 44 17.815223828031833 31.415612273632732 30.076782648042876 20.69238125029256 45 15.164870192447005 42.656758381337966 21.493011619932577 20.685359806282445 46 21.349127743471357 35.412337085781246 25.721889890383743 17.516645280363658 47 22.361032991870726 27.745217430716178 25.75484238158465 24.138907195828445 48 24.074525383820365 23.60405148464533 31.877170053429843 20.444253078104463 49 22.287735060484724 21.898472148643595 35.021699605536014 20.79209318533566 50 19.59127765761656 37.10216461088198 24.200874225505007 19.105683505996463 51 17.289581440205904 37.597975149289276 22.65931433555964 22.453129074945185 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4012.0 1 3987.5 2 3963.0 3 11386.0 4 18809.0 5 15146.0 6 11483.0 7 13449.0 8 15415.0 9 17365.0 10 19315.0 11 19981.5 12 20648.0 13 19860.5 14 19073.0 15 18015.0 16 16957.0 17 16331.5 18 15706.0 19 14106.5 20 12507.0 21 12138.5 22 11770.0 23 11189.0 24 10608.0 25 11118.0 26 12709.0 27 13790.0 28 17584.5 29 21379.0 30 23244.5 31 25110.0 32 34637.5 33 44165.0 34 46842.5 35 49520.0 36 55227.5 37 60935.0 38 82921.0 39 104907.0 40 162633.0 41 220359.0 42 278750.0 43 337141.0 44 347919.5 45 358698.0 46 326103.0 47 293508.0 48 261451.0 49 229394.0 50 215499.0 51 201604.0 52 178422.0 53 155240.0 54 134013.5 55 112787.0 56 99507.5 57 86228.0 58 76494.5 59 66761.0 60 55034.0 61 43307.0 62 37890.0 63 32473.0 64 25410.5 65 18348.0 66 14433.5 67 10519.0 68 8535.0 69 6551.0 70 4765.0 71 2979.0 72 2345.5 73 1712.0 74 1522.0 75 976.0 76 620.0 77 406.5 78 193.0 79 171.0 80 149.0 81 118.5 82 88.0 83 61.0 84 34.0 85 24.5 86 15.0 87 11.5 88 8.0 89 5.0 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 1.5 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2691754.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.390645774803527 #Duplication Level Percentage of deduplicated Percentage of total 1 82.92513855256885 12.762714332890909 2 7.588970564854372 2.335983155181686 3 2.528933191715955 1.1676574482553068 4 1.2615655711341902 0.7766523530805609 5 0.7359112106587604 0.56630743824779 6 0.45281949516496733 0.41815106700056226 7 0.3259838816794514 0.3511971715856732 8 0.24379746683097203 0.3001760362231923 9 0.19888178555286648 0.27548272012541447 >10 1.639669740156127 5.6380606425520545 >50 0.5111212140037852 5.720573079195371 >100 1.454272950862839 56.202319836831606 >500 0.12686985041836474 11.516621858367856 >1k 0.005579362446696729 1.1239261787223545 >5k 0.0 0.0 >10k+ 4.851619518866721E-4 0.8441766817396742 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 12182 0.4525673594243753 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10429 0.3874425374681341 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3167 0.11765562529116702 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.024853682765958552 0.0 2 0.0 0.0 0.0 0.09599688530229732 0.0 3 0.0 0.0 0.0 0.13247867375696293 0.0 4 0.0 0.0 0.0 0.1998696760550927 0.0 5 0.0 0.0 0.0 0.34616833484783527 0.0 6 0.0 0.0 0.0 0.49737085929843516 0.0 7 0.0 0.0 0.0 0.6109770803721291 0.0 8 0.0 0.0 0.0 0.9013082176157257 0.0 9 0.0 0.0 0.0 1.0220473341917575 0.0 10 0.0 0.0 0.0 1.2649372862453256 0.0 11 0.0 0.0 0.0 1.406257778385395 0.0 12 0.0 0.0 0.0 1.5857689818608982 0.0 13 3.7150497408009795E-5 0.0 0.0 1.6494820849156349 0.0 14 7.430099481601959E-5 0.0 0.0 1.6715494803759927 0.0 15 7.430099481601959E-5 0.0 0.0 1.7122664255351714 0.0 16 7.430099481601959E-5 0.0 0.0 1.8000530509102985 0.0 17 7.430099481601959E-5 0.0 0.0 1.8952697757670278 0.0 18 7.430099481601959E-5 0.0 0.0 2.084737312547878 0.0 19 7.430099481601959E-5 0.0 0.0 2.151459605892663 0.0 20 7.430099481601959E-5 0.0 0.0 2.2201137251026655 0.0 21 7.430099481601959E-5 0.0 0.0 2.2922599910690202 0.0 22 7.430099481601959E-5 0.0 0.0 2.3601711003308625 0.0 23 7.430099481601959E-5 0.0 0.0 2.447103264265605 0.0 24 7.430099481601959E-5 0.0 0.0 2.5063211571339727 0.0 25 7.430099481601959E-5 0.0 0.0 2.5497129381065284 0.0 26 7.430099481601959E-5 0.0 0.0 2.598863046177325 0.0 27 1.1145149222402939E-4 0.0 0.0 2.647604498776634 0.0 28 1.4860198963203918E-4 0.0 0.0 2.7005811080804563 0.0 29 1.4860198963203918E-4 0.0 0.0 2.7553037907624547 0.0 30 1.85752487040049E-4 0.0 0.0 2.841975901215341 0.0 31 1.85752487040049E-4 0.0 0.0 2.9257131223729953 0.0 32 1.85752487040049E-4 0.0 0.0 2.987271496578068 0.0 33 2.2290298444805877E-4 0.0 0.0 3.0514304056017005 0.0 34 2.2290298444805877E-4 0.0 0.0 3.1157379166149655 0.0 35 2.2290298444805877E-4 0.0 0.0 3.2185333429429286 0.0 36 2.2290298444805877E-4 0.0 0.0 3.2961035815308533 0.0 37 2.2290298444805877E-4 0.0 0.0 3.367172483072376 0.0 38 2.6005348185606855E-4 0.0 0.0 3.4301797266763603 0.0 39 2.6005348185606855E-4 0.0 0.0 3.500728521254171 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTTCA 25 3.892205E-5 45.000004 15 CTATACG 85 0.0 45.000004 1 GTAATCG 50 2.1827873E-11 45.000004 14 GTGTACC 25 3.892205E-5 45.000004 27 CGTACTC 30 2.1665928E-6 45.000004 43 CGAGAAT 25 3.892205E-5 45.000004 33 GAACCTA 30 2.1665928E-6 45.000004 19 ACGTAAA 30 2.1665928E-6 45.000004 2 GCTACGT 25 3.892205E-5 45.000004 39 CCACGTT 30 2.1665928E-6 45.000004 35 TATGTCG 30 2.1665928E-6 45.000004 1 TCACGGT 20 7.034976E-4 45.0 17 TCGCCTA 40 6.8212103E-9 45.0 35 ACTATCG 70 0.0 45.0 24 CGTGAAC 20 7.034976E-4 45.0 45 TAAGTCG 55 1.8189894E-12 45.0 1 TAACGCG 70 0.0 45.0 1 CATTACG 55 1.8189894E-12 45.0 27 CCGTAAG 20 7.034976E-4 45.0 42 CGGATTC 20 7.034976E-4 45.0 28 >>END_MODULE