##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545024_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1550540 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.95512982573813 31.0 31.0 33.0 28.0 34.0 2 31.23769138493686 31.0 31.0 34.0 28.0 34.0 3 31.30671636978085 31.0 31.0 34.0 28.0 34.0 4 35.119075289899 35.0 35.0 37.0 32.0 37.0 5 34.97696544429682 35.0 35.0 37.0 32.0 37.0 6 35.02809472828821 37.0 35.0 37.0 32.0 37.0 7 35.579552929946985 37.0 35.0 37.0 35.0 37.0 8 35.5301939969301 37.0 35.0 37.0 35.0 37.0 9 37.24224915190837 39.0 37.0 39.0 34.0 39.0 10 36.65971661485676 39.0 35.0 39.0 32.0 39.0 11 36.30812749106763 38.0 35.0 39.0 32.0 39.0 12 35.078090858668595 35.0 34.0 39.0 30.0 39.0 13 34.3503069898229 35.0 33.0 39.0 25.0 39.0 14 35.22269015955732 36.0 33.0 40.0 26.0 41.0 15 35.76114385955861 36.0 33.0 40.0 30.0 41.0 16 35.98361796535401 36.0 34.0 40.0 31.0 41.0 17 35.912236382163634 36.0 34.0 40.0 31.0 41.0 18 35.87563107046577 36.0 34.0 40.0 30.0 41.0 19 35.75076940936706 36.0 34.0 40.0 30.0 41.0 20 35.56428599068712 35.0 34.0 40.0 30.0 41.0 21 35.3481122705638 35.0 34.0 40.0 29.0 41.0 22 35.20890979916674 35.0 34.0 40.0 29.0 41.0 23 35.22942071794343 35.0 34.0 40.0 29.0 41.0 24 35.111745585408954 35.0 34.0 40.0 29.0 41.0 25 34.998642408451246 35.0 34.0 40.0 29.0 41.0 26 34.83868458730507 35.0 34.0 39.0 29.0 41.0 27 34.7158164252454 35.0 34.0 40.0 27.0 41.0 28 34.78514066067306 35.0 34.0 40.0 27.0 41.0 29 34.8783049776207 35.0 34.0 40.0 29.0 41.0 30 34.796840455583215 36.0 34.0 39.0 29.0 41.0 31 34.547998116785124 35.0 33.0 39.0 27.0 41.0 32 34.268000825518854 35.0 33.0 39.0 25.0 41.0 33 34.029118242676745 35.0 33.0 39.0 24.0 41.0 34 33.906795052046384 35.0 33.0 39.0 23.0 41.0 35 33.70777471074593 35.0 33.0 39.0 23.0 41.0 36 33.468530318469696 35.0 33.0 39.0 22.0 41.0 37 33.37925109961691 35.0 32.0 39.0 23.0 41.0 38 33.40581281360042 35.0 32.0 39.0 23.0 41.0 39 33.398910702077984 35.0 33.0 39.0 23.0 41.0 40 33.161604344292954 35.0 32.0 39.0 22.0 41.0 41 33.1901795503502 35.0 32.0 39.0 22.0 41.0 42 33.166240148593396 35.0 32.0 39.0 22.0 41.0 43 33.03037780386188 35.0 32.0 39.0 22.0 41.0 44 32.96431049827802 35.0 32.0 39.0 22.0 41.0 45 32.90579153069253 35.0 32.0 38.0 22.0 41.0 46 32.866456847291914 35.0 32.0 38.0 22.0 40.0 47 32.80386832974319 35.0 32.0 38.0 22.0 40.0 48 32.824632708604746 35.0 32.0 38.0 22.0 40.0 49 32.87361822332865 35.0 32.0 38.0 22.0 40.0 50 32.73239581049183 35.0 32.0 38.0 20.0 40.0 51 32.55369935635327 35.0 31.0 38.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 1.0 13 9.0 14 35.0 15 74.0 16 245.0 17 628.0 18 1454.0 19 2697.0 20 4600.0 21 7344.0 22 10388.0 23 14912.0 24 20514.0 25 27420.0 26 34483.0 27 39027.0 28 42099.0 29 46902.0 30 54248.0 31 66059.0 32 81734.0 33 104555.0 34 181046.0 35 247567.0 36 97138.0 37 112389.0 38 148434.0 39 204424.0 40 112.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.119545448682395 24.16055051788409 28.60081004037303 16.11909399306048 2 31.918879874108374 25.573542120809524 29.784720162008078 12.722857843074026 3 28.742115650031604 24.247423478272086 33.68736053245966 13.323100339236655 4 26.674448901672964 27.458175861312835 31.659099410527947 14.208275826486256 5 23.284339649412463 31.76112838108014 31.026739071549265 13.92779289795813 6 20.46183910121635 40.01025449198344 29.010344783107822 10.51756162369239 7 84.42297522153572 5.445264230526139 8.377855456808597 1.7539050911295417 8 86.18036297032002 4.008151998658532 8.001405961793957 1.8100790692274948 9 82.15144401305352 5.530911811368942 9.511267042449727 2.8063771331278136 10 56.7248829440066 19.780850542391683 14.249487275400826 9.244779238200884 11 53.353412359565056 18.096147148735277 18.305751544623163 10.244688947076503 12 46.875733615385606 20.494021437692673 21.681994659924932 10.948250286996789 13 20.971596992015684 45.83061385065848 20.920775987720408 12.277013169605427 14 12.744850181227186 48.59448966166626 26.657358081700565 12.003302075405987 15 11.482902730661577 22.040063461761708 54.434584080384894 12.042449727191817 16 13.073638861299935 15.588698130973725 53.02707443858269 18.310588569143654 17 12.878932500935159 16.404349452448823 30.853896062017107 39.86282198459891 18 20.910585989397244 22.053155674797168 36.80259780463581 20.233660531169786 19 31.193713157996566 22.679582597030713 26.046280650612047 20.080423594360674 20 33.3492202716473 21.447560204831863 24.956144311014228 20.24707521250661 21 20.916067950520464 28.570175551743265 28.62751041572613 21.88624608201014 22 21.859416719336487 24.964786461490835 24.99819417751235 28.177602641660325 23 17.67139190217602 31.305222696608926 24.643994995291962 26.379390405923097 24 18.24957756652521 22.180079198214816 43.35244495466096 16.217898280599016 25 15.76663613966747 23.845627974770082 39.41155984366736 20.97617604189508 26 14.029305919228142 36.663549473086796 28.553987643014693 20.75315696467037 27 16.372618571594412 36.520825002902214 29.36963896448979 17.736917461013583 28 13.310072619861469 29.866885085196127 41.44743121751132 15.37561107743109 29 13.76288260863957 24.35248365085712 40.71162304745444 21.173010693048873 30 16.69347453145356 30.958956234602137 33.926438531092394 18.421130702851908 31 30.52497839462381 26.845679569698298 25.035342525829712 17.59399950984818 32 31.65097320933352 26.498058740825776 27.404323654984715 14.446644394855987 33 29.378797064248584 27.962451790988947 24.351580739613297 18.307170405149172 34 19.09650831323281 27.763359861725593 29.14649089994453 23.99364092509706 35 19.31778606163014 25.992621925264746 32.33305816038283 22.356533852722276 36 32.35285771408671 24.527712925819394 25.699240264681983 17.42018909541192 37 19.48050356649941 34.99464702619732 28.87793929856695 16.646910108736314 38 20.294413559147138 35.11047764004798 23.101564616198228 21.49354418460665 39 20.8996220671508 32.71247436377004 26.79531002102493 19.592593548054225 40 24.108375146723077 26.825041598410877 24.93860203541992 24.12798121944613 41 16.09864950275388 24.557895958827245 27.870354844118822 31.47309969430005 42 22.763424355385865 25.49331200742967 23.452861583706323 28.290402053478143 43 23.57230384253228 26.237504353322066 25.052755814103474 25.137435990042178 44 19.493144323912958 31.505604499077737 28.14619422910728 20.85505694790202 45 16.17565493312007 41.02602964128626 22.129838636861994 20.668476788731667 46 21.4972848169025 34.34010086808467 25.813781005327176 18.34883330968566 47 21.863350832613154 28.9709391566809 26.122383169734416 23.04332684097153 48 23.41042475524656 23.874779109213566 32.094367123711734 20.620429011828136 49 21.182878223070674 24.229300759735317 32.90131180104996 21.686509216144053 50 18.27402066376875 35.60798173539541 26.11174171578934 20.0062558850465 51 18.32161698505037 36.07040127955422 23.431062726533984 22.17691900886143 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2835.0 1 2919.5 2 3004.0 3 8563.5 4 14123.0 5 10796.0 6 7469.0 7 8115.5 8 8762.0 9 9455.0 10 10148.0 11 10409.0 12 10670.0 13 10380.0 14 10090.0 15 9357.5 16 8625.0 17 8063.0 18 7501.0 19 7160.0 20 6819.0 21 6629.5 22 6440.0 23 6251.5 24 6063.0 25 6425.5 26 9286.0 27 11784.0 28 13643.5 29 15503.0 30 18288.0 31 21073.0 32 25106.5 33 29140.0 34 30625.5 35 32111.0 36 35866.5 37 39622.0 38 47696.0 39 55770.0 40 86685.5 41 117601.0 42 148534.5 43 179468.0 44 177594.0 45 175720.0 46 161836.5 47 147953.0 48 138673.0 49 129393.0 50 118736.5 51 108080.0 52 97975.0 53 87870.0 54 80706.5 55 73543.0 56 65361.0 57 57179.0 58 54805.0 59 52431.0 60 46791.0 61 41151.0 62 34140.5 63 27130.0 64 21175.0 65 15220.0 66 11994.0 67 8768.0 68 7228.0 69 5688.0 70 4588.0 71 3488.0 72 2918.5 73 2349.0 74 1971.5 75 1164.0 76 734.0 77 567.0 78 400.0 79 303.0 80 206.0 81 159.0 82 112.0 83 92.0 84 72.0 85 51.0 86 30.0 87 20.0 88 10.0 89 6.0 90 2.0 91 2.5 92 3.0 93 2.5 94 2.0 95 2.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1550540.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.47732158326037 #Duplication Level Percentage of deduplicated Percentage of total 1 82.37082132200402 14.396213333219443 2 6.444069542623305 2.2525015140264215 3 2.1774918678458555 1.141701768578289 4 1.1191231650752231 0.7823710178918342 5 0.6532946107041372 0.5708919999943549 6 0.47083853966091455 0.4937397942867896 7 0.3621145783916489 0.4430155055576316 8 0.27949972124667893 0.3907925208527871 9 0.25505491136043623 0.4011909036512681 >10 2.999172314669421 12.412700957270928 >50 1.1413906782016006 14.604045486175957 >100 1.7167288331737622 49.974864286716745 >500 0.008171361819520287 0.9131626190121225 >1k 0.001857127686254611 0.721143352143717 >5k 3.714255372509221E-4 0.5016649406217162 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7728 0.49840700659125203 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4652 0.3000245075909038 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2439 0.15730003740632295 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.013930630619010152 0.0 2 0.0 0.0 0.0 0.05153043455828292 0.0 3 0.0 0.0 0.0 0.07668296206482902 0.0 4 0.0 0.0 0.0 0.11434725966437499 0.0 5 0.0 0.0 0.0 0.1819366156306835 0.0 6 0.0 0.0 0.0 0.2808053968294917 0.0 7 0.0 0.0 0.0 0.3483947527958002 0.0 8 0.0 0.0 0.0 0.5759283862396326 0.0 9 0.0 0.0 0.0 0.6867284945889819 0.0 10 0.0 0.0 0.0 0.8443510002966709 0.0 11 0.0 0.0 0.0 0.9509590207282624 0.0 12 0.0 0.0 0.0 1.05163362441472 0.0 13 6.449366027319515E-5 0.0 0.0 1.0978110851703278 0.0 14 6.449366027319515E-5 0.0 0.0 1.1161272846879151 0.0 15 6.449366027319515E-5 0.0 0.0 1.1394739897068118 0.0 16 6.449366027319515E-5 0.0 0.0 1.1912623989061875 0.0 17 6.449366027319515E-5 0.0 0.0 1.2467914404014084 0.0 18 6.449366027319515E-5 0.0 0.0 1.3504972461207063 0.0 19 6.449366027319515E-5 0.0 0.0 1.3861622402517833 0.0 20 6.449366027319515E-5 0.0 0.0 1.4256323603389787 0.0 21 6.449366027319515E-5 0.0 0.0 1.4701974795877566 0.0 22 6.449366027319515E-5 0.0 0.0 1.515665510080359 0.0 23 6.449366027319515E-5 0.0 0.0 1.5740322726276008 0.0 24 6.449366027319515E-5 0.0 0.0 1.6153727088627188 0.0 25 6.449366027319515E-5 0.0 0.0 1.6490383995253266 0.0 26 6.449366027319515E-5 0.0 0.0 1.6814142169824706 0.0 27 6.449366027319515E-5 0.0 0.0 1.7183045906587382 0.0 28 6.449366027319515E-5 0.0 0.0 1.7504224334747893 0.0 29 6.449366027319515E-5 0.0 0.0 1.792536793633186 0.0 30 6.449366027319515E-5 0.0 0.0 1.8566434919447419 0.0 31 6.449366027319515E-5 0.0 0.0 1.9084319011441175 0.0 32 6.449366027319515E-5 0.0 0.0 1.9553187921627304 0.0 33 6.449366027319515E-5 0.0 0.0 2.0010447972964256 0.0 34 6.449366027319515E-5 0.0 0.0 2.047673713673946 0.0 35 6.449366027319515E-5 0.0 0.0 2.119455157558012 0.0 36 1.289873205463903E-4 0.0 0.0 2.1745327434313206 0.0 37 1.289873205463903E-4 0.0 0.0 2.2290943800224436 0.0 38 1.289873205463903E-4 0.0 0.0 2.2817857004656443 0.0 39 1.289873205463903E-4 0.0 0.0 2.3369922736594995 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACACGAT 20 7.0340483E-4 45.000004 41 TCCGATT 20 7.0340483E-4 45.000004 11 ACGCAAC 20 7.0340483E-4 45.000004 21 CGACCGG 40 6.8175723E-9 45.000004 2 CGTTACC 20 7.0340483E-4 45.000004 40 CATAGGA 20 7.0340483E-4 45.000004 13 TATTCCG 20 7.0340483E-4 45.000004 1 ACGTCAT 20 7.0340483E-4 45.000004 32 TCGAGTA 20 7.0340483E-4 45.000004 24 ACGAGTT 20 7.0340483E-4 45.000004 10 ATACAAC 20 7.0340483E-4 45.000004 10 GTCGACC 25 3.8914375E-5 45.0 9 CACGGTA 50 2.1827873E-11 45.0 44 CGACGGT 175 0.0 45.0 28 TCCGAAC 45 3.8562575E-10 45.0 22 TCTTCGA 25 3.8914375E-5 45.0 15 CGTTCGA 45 3.8562575E-10 45.0 14 CCGTCTA 25 3.8914375E-5 45.0 30 CTGCGTA 25 3.8914375E-5 45.0 25 ATCGTAC 25 3.8914375E-5 45.0 10 >>END_MODULE