##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545023_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3473676 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.016752569900014 31.0 31.0 33.0 30.0 34.0 2 31.313157876554982 31.0 31.0 34.0 30.0 34.0 3 31.407238614079148 31.0 31.0 34.0 30.0 34.0 4 35.231682229430724 37.0 35.0 37.0 33.0 37.0 5 35.11459042236524 37.0 35.0 37.0 32.0 37.0 6 35.17002564430304 37.0 35.0 37.0 32.0 37.0 7 35.65633294527181 37.0 35.0 37.0 35.0 37.0 8 35.59098833627546 37.0 35.0 37.0 35.0 37.0 9 37.3181258125398 39.0 37.0 39.0 35.0 39.0 10 36.72555960889847 39.0 37.0 39.0 32.0 39.0 11 36.366377578104576 38.0 35.0 39.0 32.0 39.0 12 35.66395800874923 37.0 35.0 39.0 31.0 39.0 13 35.22884460151148 37.0 35.0 39.0 30.0 39.0 14 36.238784503793674 38.0 35.0 40.0 30.0 41.0 15 36.57602234635585 38.0 35.0 40.0 31.0 41.0 16 36.661908306934784 38.0 35.0 40.0 31.0 41.0 17 36.565112578144884 38.0 35.0 40.0 31.0 41.0 18 36.50537355815568 38.0 35.0 40.0 31.0 41.0 19 36.4319850210555 37.0 35.0 40.0 31.0 41.0 20 36.28294982030564 37.0 35.0 40.0 31.0 41.0 21 36.133013556819925 37.0 34.0 40.0 30.0 41.0 22 36.03481153682727 37.0 34.0 40.0 30.0 41.0 23 35.99041965917374 37.0 34.0 40.0 30.0 41.0 24 35.90777694868491 37.0 34.0 40.0 30.0 41.0 25 35.801294075786 37.0 34.0 40.0 30.0 41.0 26 35.68141933790025 37.0 34.0 40.0 30.0 41.0 27 35.56436927335768 37.0 34.0 40.0 29.0 41.0 28 35.592820689091326 37.0 34.0 40.0 29.0 41.0 29 35.633970180293154 37.0 34.0 40.0 30.0 41.0 30 35.53399165610149 37.0 34.0 40.0 29.0 41.0 31 35.34659306164421 37.0 34.0 40.0 29.0 41.0 32 35.09683056220557 37.0 34.0 40.0 27.0 41.0 33 34.87011425360339 36.0 34.0 40.0 26.0 41.0 34 34.74209569343831 36.0 34.0 40.0 25.0 41.0 35 34.57096919804841 36.0 33.0 40.0 24.0 41.0 36 34.390492953286376 36.0 33.0 40.0 23.0 41.0 37 34.341865505015434 36.0 33.0 40.0 23.0 41.0 38 34.3148088653058 36.0 33.0 40.0 24.0 41.0 39 34.26658128161636 36.0 33.0 40.0 23.0 41.0 40 34.125123932111116 36.0 33.0 40.0 23.0 41.0 41 34.09108132134373 36.0 33.0 40.0 23.0 41.0 42 34.07036695420068 36.0 33.0 40.0 23.0 41.0 43 33.967676317537965 36.0 33.0 40.0 23.0 41.0 44 33.9279357084541 35.0 33.0 40.0 23.0 41.0 45 33.877060785173974 35.0 33.0 40.0 23.0 41.0 46 33.84258117337368 35.0 33.0 40.0 23.0 41.0 47 33.75383800907166 35.0 33.0 40.0 23.0 41.0 48 33.723060527233976 35.0 33.0 40.0 23.0 41.0 49 33.753495144624885 36.0 33.0 40.0 23.0 41.0 50 33.65152132783829 35.0 33.0 40.0 23.0 41.0 51 33.45774994559078 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 5.0 11 5.0 12 8.0 13 15.0 14 35.0 15 130.0 16 425.0 17 994.0 18 2397.0 19 4732.0 20 7983.0 21 12469.0 22 18641.0 23 26952.0 24 37712.0 25 51566.0 26 65727.0 27 74699.0 28 80746.0 29 89935.0 30 105180.0 31 129055.0 32 160496.0 33 205479.0 34 331397.0 35 448086.0 36 253068.0 37 308329.0 38 428156.0 39 629002.0 40 250.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.68641059212201 23.230174604655126 28.560665991877194 15.522748811345673 2 32.063813665983815 25.44189498387299 29.46587419206627 13.028417158076918 3 29.04994593623585 24.67630832581968 33.5006488803216 12.773096857622876 4 25.724160802561897 28.520132562737572 31.421439420371968 14.334267214328566 5 22.970680051910424 32.495719232306065 30.853222925799646 13.680377789983867 6 20.65221396583907 40.865469318382026 27.98683584767261 10.495480868106293 7 85.5134157589827 4.788673439894797 8.169616279699085 1.5282945214234143 8 87.51731595001951 3.5644947888058645 7.4467509347446335 1.4714383264299837 9 82.74680770457579 5.907142750216197 8.873193700276019 2.4728558449319973 10 46.81691671877285 30.586445022506414 13.915748043283255 8.68089021543748 11 40.271401247554465 22.193837306645754 25.50442240439235 12.030339041407432 12 36.84649921293753 23.177809329367506 26.526941487922308 13.448749969772656 13 21.166856091356824 37.97415187829838 27.011788088468812 13.847203941875986 14 15.507145744162667 40.6815143381248 29.422433180296608 14.388906737415924 15 15.09766598842264 24.764111563657636 46.09134530681618 14.046877141103545 16 17.414922980727045 21.08426347189548 44.13791038657606 17.36290316080141 17 17.46297006398985 20.907275174771627 31.296845186482564 30.332909574755963 18 21.51579479490891 23.7553243307666 35.378256348605916 19.350624525718576 19 28.27042591191579 24.171425314278018 28.391738319866334 19.16641045393986 20 30.01054214612992 23.962511184117343 27.448673969593017 18.578272700159715 21 22.32896792907571 27.586481871078362 30.484679630454885 19.599870569391044 22 21.96681555792768 25.169157975585517 28.596305470055356 24.267720996431446 23 18.880747657524765 29.72292176933024 28.095337619282855 23.300992953862135 24 18.799968678713846 25.006275772409403 39.32367324989435 16.870082298982403 25 17.674273593737585 25.930599169295004 36.505362042976955 19.889765193990456 26 17.261742315633352 33.47396245360822 29.905984323235675 19.358310907522753 27 17.61379011744331 33.5005625164811 31.045785502159674 17.83986186391592 28 15.829944991991193 29.373407306841514 38.1045900653947 16.692057635772596 29 16.50162536747814 25.875902070313984 37.896683513373155 19.72578904883472 30 18.39898136728929 29.860988762337076 33.396263785108346 18.343766085265294 31 27.027477519492322 27.750832259542918 27.537455997623265 17.684234223341498 32 27.984705539607035 27.15020053683763 28.706678458209687 16.158415465345648 33 26.247151432660964 28.02031622983836 27.043282102303152 18.689250235197523 34 19.528332521513235 28.723634558893806 29.956104138670387 21.79192878092257 35 20.21267959360631 26.88134990137249 31.57392917474169 21.33204133027951 36 27.56183938859007 27.615586485325633 27.08421856269842 17.738355563385877 37 20.446639237510926 32.997435569696194 29.35538605212461 17.200539140668273 38 20.896940301858898 33.40403653075301 25.03152280178117 20.667500365606926 39 20.865475075971393 31.934555784707612 27.44055576858636 19.75941337073463 40 23.63291798083644 27.838232466125223 26.51801722440435 22.010832328633988 41 17.870117996036473 26.920904540319825 28.372594335222974 26.836383128420728 42 22.240790447928937 27.155497519054745 25.93434160238318 24.66937043063314 43 22.184826679287305 27.224502227611325 27.27390234437524 23.316768748726133 44 19.837486282543335 30.821872851699467 29.190517480617075 20.150123385140123 45 17.869945268355483 36.284587278721446 25.514152730421607 20.331314722501464 46 20.833174999625754 33.50945799205222 26.511683876101284 19.145683132220736 47 21.254659329194777 28.92209866435442 27.746686795199093 22.076555211251712 48 22.624677718935217 26.252649930505896 30.55495100867208 20.56772134188681 49 21.08495438261945 26.32410161454321 31.736034103353333 20.854909899484007 50 19.452994464653585 33.52572318201237 27.62692893637749 19.394353416956562 51 18.590824244978517 33.62947494239532 26.18986341846505 21.589837394161112 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4442.0 1 4978.0 2 5514.0 3 19640.5 4 33767.0 5 26254.5 6 18742.0 7 19429.5 8 20117.0 9 20805.0 10 21493.0 11 21564.0 12 21635.0 13 20937.5 14 20240.0 15 19696.0 16 19152.0 17 17898.5 18 16645.0 19 16046.5 20 15448.0 21 16466.5 22 17485.0 23 19814.5 24 22144.0 25 24156.0 26 28049.0 27 29930.0 28 40645.5 29 51361.0 30 61277.0 31 71193.0 32 81425.0 33 91657.0 34 100124.5 35 108592.0 36 116691.5 37 124791.0 38 150974.5 39 177158.0 40 215242.0 41 253326.0 42 297190.0 43 341054.0 44 348915.5 45 356777.0 46 335613.5 47 314450.0 48 288842.0 49 263234.0 50 249640.5 51 236047.0 52 220962.5 53 205878.0 54 179931.5 55 153985.0 56 139888.0 57 125791.0 58 116678.5 59 107566.0 60 92473.5 61 77381.0 62 64679.0 63 51977.0 64 40200.0 65 28423.0 66 22121.5 67 15820.0 68 12582.5 69 9345.0 70 7601.5 71 5858.0 72 4991.5 73 4125.0 74 3346.0 75 1915.0 76 1263.0 77 941.5 78 620.0 79 435.0 80 250.0 81 200.5 82 151.0 83 107.5 84 64.0 85 44.0 86 24.0 87 18.0 88 12.0 89 9.5 90 7.0 91 6.0 92 5.0 93 3.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3473676.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.887072018818623 #Duplication Level Percentage of deduplicated Percentage of total 1 81.66306352167551 12.157239079245432 2 6.626241365664912 1.9729066484945719 3 2.278671821985146 1.0176825456343654 4 1.2239082857044175 0.7288164317484201 5 0.7341444001047623 0.5464630278285996 6 0.5247169457416645 0.4686899376450421 7 0.3736963192645579 0.3894270812641236 8 0.2992557669820306 0.3564033724086635 9 0.254212874401224 0.3406036832389722 >10 2.9524939457684 10.38466084902555 >50 1.1355213424971362 12.309107449619907 >100 1.911264564802363 56.181642216142414 >500 0.02007958185484026 1.8621069550408347 >1k 0.0023393687597872146 0.5270387815769702 >5k 1.9494739664893457E-4 0.26639256476294104 >10k+ 1.9494739664893457E-4 0.4908193763232225 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16912 0.4868617568247586 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 9179 0.2642445639719997 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3675 0.10579570460802909 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.010075781391240863 0.0 2 0.0 0.0 0.0 0.034113716996058356 0.0 3 0.0 0.0 0.0 0.051760728404145924 0.0 4 0.0 0.0 0.0 0.07384108362437948 0.0 5 0.0 0.0 0.0 0.12206089456817504 0.0 6 0.0 0.0 0.0 0.19711107195950342 0.0 7 0.0 0.0 0.0 0.24944755930029167 0.0 8 0.0 0.0 0.0 0.4047297445127295 0.0 9 0.0 0.0 0.0 0.48357993088589724 0.0 10 0.0 0.0 0.0 0.5923695819644664 0.0 11 0.0 0.0 0.0 0.6577182212733715 0.0 12 0.0 0.0 0.0 0.7279608115437364 0.0 13 2.8787946832116753E-5 0.0 0.0 0.7581593677706269 0.0 14 2.8787946832116753E-5 0.0 0.0 0.7696457585566414 0.0 15 2.8787946832116753E-5 0.0 0.0 0.7842412476005246 0.0 16 2.8787946832116753E-5 0.0 0.0 0.8160231409031815 0.0 17 2.8787946832116753E-5 0.0 0.0 0.855117172701196 0.0 18 2.8787946832116753E-5 0.0 0.0 0.9239491535767872 0.0 19 2.8787946832116753E-5 0.0 0.0 0.9503477008218383 0.0 20 2.8787946832116753E-5 0.0 0.0 0.9817265628688455 0.0 21 2.8787946832116753E-5 0.0 0.0 1.015350884768758 0.0 22 2.8787946832116753E-5 0.0 0.0 1.0516524857240572 0.0 23 2.8787946832116753E-5 0.0 0.0 1.0943737988229185 0.0 24 2.8787946832116753E-5 0.0 0.0 1.1267890269558818 0.0 25 2.8787946832116753E-5 0.0 0.0 1.1537633331375754 0.0 26 2.8787946832116753E-5 0.0 0.0 1.1814861259369038 0.0 27 2.8787946832116753E-5 0.0 0.0 1.2113392268018088 0.0 28 5.7575893664233506E-5 0.0 0.0 1.2425741491146556 0.0 29 5.7575893664233506E-5 0.0 0.0 1.2786166585484657 0.0 30 5.7575893664233506E-5 0.0 0.0 1.3290819293451663 0.0 31 5.7575893664233506E-5 0.0 0.0 1.3728108205831517 0.0 32 5.7575893664233506E-5 0.0 0.0 1.4152154662668597 0.0 33 5.7575893664233506E-5 0.0 0.0 1.456468594077283 0.0 34 5.7575893664233506E-5 0.0 0.0 1.500859608092407 0.0 35 5.7575893664233506E-5 0.0 0.0 1.5543764012533121 0.0 36 5.7575893664233506E-5 0.0 0.0 1.605129551518334 0.0 37 5.7575893664233506E-5 0.0 0.0 1.6558827017833557 0.0 38 5.7575893664233506E-5 0.0 0.0 1.7065207002610492 0.0 39 5.7575893664233506E-5 0.0 0.0 1.758742035814509 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCGTAG 40 6.8212103E-9 45.000004 1 TCCGCGA 25 3.892441E-5 45.0 18 CGTTGTC 25 3.892441E-5 45.0 21 CGTAAGG 445 0.0 43.483147 2 CGTTTTT 17955 0.0 43.45865 1 CTATGCG 135 0.0 43.333332 1 ACTACGG 95 0.0 42.63158 2 GACGGTC 190 0.0 42.63158 29 TAGTACG 180 0.0 42.5 1 CGCGTCA 80 0.0 42.187504 39 CGACGGT 195 0.0 41.53846 28 ACGTATA 175 0.0 41.142857 13 TGCGGTA 55 6.184564E-11 40.909092 4 CCGAACC 110 0.0 40.909092 30 CGCCTAT 50 1.0822987E-9 40.5 28 TACGGGT 185 0.0 40.135136 4 TACGATA 45 1.9303116E-8 40.0 44 ACTACGA 45 1.9303116E-8 40.0 42 GCGATAC 135 0.0 40.0 9 TACTACG 90 0.0 40.0 1 >>END_MODULE