##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545022_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 797557 Sequences flagged as poor quality 0 Sequence length 52 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.904326587316014 34.0 33.0 34.0 31.0 34.0 2 33.20220247581051 34.0 33.0 34.0 31.0 34.0 3 33.257892539342016 34.0 34.0 34.0 31.0 34.0 4 36.55287333695272 37.0 37.0 37.0 35.0 37.0 5 36.49710929751729 37.0 37.0 37.0 35.0 37.0 6 36.609052393747405 37.0 37.0 37.0 35.0 37.0 7 36.48136371444298 37.0 37.0 37.0 35.0 37.0 8 36.50583469269281 37.0 37.0 37.0 35.0 37.0 9 38.30441711376115 39.0 39.0 39.0 37.0 39.0 10 38.13888662503119 39.0 39.0 39.0 35.0 39.0 11 37.525068427711126 39.0 35.0 39.0 35.0 39.0 12 37.44480707961939 39.0 35.0 39.0 35.0 39.0 13 37.35305815132962 39.0 35.0 39.0 35.0 39.0 14 38.72011780976156 41.0 36.0 41.0 35.0 41.0 15 38.78695190437799 41.0 36.0 41.0 35.0 41.0 16 38.777397728312835 41.0 36.0 41.0 35.0 41.0 17 38.80189002165363 41.0 36.0 41.0 35.0 41.0 18 38.79763954175062 41.0 36.0 41.0 35.0 41.0 19 38.74683564936424 41.0 36.0 41.0 35.0 41.0 20 38.685146014642214 41.0 35.0 41.0 35.0 41.0 21 38.63908034159314 41.0 35.0 41.0 35.0 41.0 22 38.58304798277741 41.0 35.0 41.0 35.0 41.0 23 38.602141288961164 41.0 35.0 41.0 35.0 41.0 24 38.56923831149373 41.0 35.0 41.0 35.0 41.0 25 38.49061571774807 40.0 35.0 41.0 35.0 41.0 26 38.43020248082582 40.0 35.0 41.0 35.0 41.0 27 38.39296877840706 40.0 35.0 41.0 35.0 41.0 28 38.43757499463988 40.0 35.0 41.0 35.0 41.0 29 38.41711626880586 40.0 36.0 41.0 35.0 41.0 30 38.34720903960469 40.0 35.0 41.0 35.0 41.0 31 38.28857749352084 40.0 35.0 41.0 35.0 41.0 32 38.21028841825726 40.0 35.0 41.0 35.0 41.0 33 38.10966363532638 40.0 35.0 41.0 35.0 41.0 34 37.990581237453874 40.0 35.0 41.0 35.0 41.0 35 37.95224040413412 40.0 35.0 41.0 35.0 41.0 36 37.9116539632904 40.0 35.0 41.0 35.0 41.0 37 37.86869778586358 40.0 35.0 41.0 35.0 41.0 38 37.79501026258938 40.0 35.0 41.0 35.0 41.0 39 37.71927022143872 40.0 35.0 41.0 35.0 41.0 40 37.63802085618959 40.0 35.0 41.0 34.0 41.0 41 37.59329678004205 40.0 35.0 41.0 34.0 41.0 42 37.525468399123824 40.0 35.0 41.0 34.0 41.0 43 37.452045433743294 40.0 35.0 41.0 34.0 41.0 44 37.38119657905328 39.0 35.0 41.0 34.0 41.0 45 37.318712016821365 39.0 35.0 41.0 34.0 41.0 46 37.339970685480786 39.0 35.0 41.0 34.0 41.0 47 37.272156096680234 39.0 35.0 41.0 34.0 41.0 48 37.267814087268995 39.0 35.0 41.0 34.0 41.0 49 37.230649345438636 39.0 35.0 41.0 34.0 41.0 50 37.16443965760441 39.0 35.0 41.0 34.0 41.0 51 37.098050672240355 39.0 35.0 41.0 34.0 41.0 52 36.881860481445216 38.0 35.0 41.0 34.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 5.0 14 8.0 15 19.0 16 16.0 17 48.0 18 79.0 19 121.0 20 226.0 21 354.0 22 596.0 23 975.0 24 1637.0 25 2737.0 26 3747.0 27 4140.0 28 4497.0 29 5010.0 30 6042.0 31 7377.0 32 9352.0 33 13380.0 34 43974.0 35 134228.0 36 30374.0 37 45899.0 38 79341.0 39 399381.0 40 3993.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.159923365978855 21.2565371503228 23.241473650159172 19.34206583353917 2 29.925259260466653 23.0957787343099 25.141902083487448 21.837059921736003 3 30.17025742360734 23.281721557205316 25.043727282187984 21.50429373699936 4 28.19434849170655 25.813703597360437 22.145752591977754 23.84619531895526 5 24.3218979960053 33.35310203534042 22.62935439097143 19.69564557768285 6 84.03073385350514 2.6765485100124504 10.427091731374686 2.8656259051077226 7 86.37827766542078 2.487847263581161 6.4345244289749814 4.699350642023078 8 75.12478731927624 4.824858912905285 12.870177303941913 7.180176463876562 9 48.60593035983635 19.429457706471137 16.2738211814328 15.690790752259712 10 40.26884598843719 19.27059758738247 26.699909849703534 13.760646574476809 11 38.04003977145207 17.973887759746326 25.026549826532772 18.959522642268826 12 24.991944149446372 25.182776904973565 30.67003361515227 19.155245330427796 13 18.09864373330057 27.611318062533464 34.14991028854364 20.140127915622333 14 18.768062972301667 21.94714609739492 39.914263181189554 19.370527749113855 15 21.72095536745336 19.402249619776395 38.99294972020809 19.88384529256216 16 21.918433416044245 21.902509789268983 28.42542915427988 27.75362764040689 17 21.734747485132726 22.524408913720272 31.555362187279407 24.1854814138676 18 23.349804465386175 27.359674606329076 29.62459109505653 19.665929833228223 19 25.369848173860927 24.415433630448984 25.631647643992846 24.583070551697244 20 22.50108769655335 30.658498389456806 26.903782425582122 19.936631488407723 21 21.426430963554957 23.33576158193082 29.561398119507448 25.676409335006777 22 19.58693861379187 26.014441601039174 27.89230111452849 26.506318670640468 23 22.18675279635186 21.546046238701436 33.99769546251867 22.26950550242804 24 24.069000710920974 21.16162230411118 29.354892502980977 25.414484481986864 25 17.326410526144212 25.900468555852434 31.56601973275891 25.20710118524444 26 17.267856717450915 26.157378093352573 30.09114082128299 26.483624367913517 27 21.656007031472356 25.4159890766428 31.428850853293245 21.499153038591597 28 19.806358667781737 25.812324385592504 28.7825196192874 25.598797327338357 29 21.92344873156401 25.33123024435871 30.5286017174948 22.216719306582476 30 26.587817547836707 22.567916775854265 25.104663365753172 25.73960231055586 31 27.351650101497448 22.95384530510045 28.709546778474763 20.984957814927334 32 24.03314120495463 25.783862470017816 26.538918221518966 23.64407810350859 33 21.86226188222284 21.43759004058644 32.306405686364734 24.393742390825985 34 18.365207753176264 24.12667683939831 33.36940181077967 24.138713596645758 35 25.274933327649308 24.677358483468893 28.894988069818204 21.152720119063588 36 24.84311466139724 25.850064634878763 26.939641931548465 22.36717877217553 37 21.837812219063967 25.028555952740682 31.16241221630554 21.971219611889808 38 21.768099333339187 23.951642327758393 29.583716273570417 24.696542065332007 39 26.968605378675132 20.869229409308677 29.64314776247967 22.51901744953652 40 20.16783753386905 19.328524481635796 32.88492233157003 27.61871565292512 41 20.26149855120073 22.810783429899054 28.1737856980755 28.75393232082472 42 20.292217358759313 20.73506971915487 30.678058119983902 28.29465480210192 43 23.210504076824602 23.981859603764995 28.55758271822578 24.250053601184618 44 19.617281272686466 25.697473660189807 28.34794252949946 26.337302537624268 45 21.510061349847096 23.96844363474962 28.43132215001561 26.09017286538768 46 23.155210223219154 21.273839988866 30.70551697245463 24.865432815460213 47 20.627491201255836 20.329456076493592 33.76586250261737 25.277190219633205 48 22.011342136047958 18.979082372795926 30.106437533618287 28.903137957537833 49 21.53839788253379 21.538523265421784 32.77170158371126 24.15137726833317 50 20.517028876932933 22.095599436780066 31.4601965752918 25.927175110995204 51 20.28080751595184 19.347833446386904 31.217329921247007 29.15402911641425 52 20.941324569905348 18.096762989980654 35.91091295042235 25.050999489691645 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 121.0 1 311.5 2 502.0 3 2537.5 4 4573.0 5 2816.5 6 1060.0 7 1151.0 8 1242.0 9 1282.5 10 1323.0 11 1321.5 12 1320.0 13 1259.0 14 1152.0 15 1106.0 16 1076.5 17 1047.0 18 1096.0 19 1145.0 20 1211.0 21 1277.0 22 1305.0 23 1333.0 24 1721.5 25 2110.0 26 2632.5 27 3155.0 28 4397.5 29 5640.0 30 6147.0 31 6654.0 32 6836.0 33 7018.0 34 8710.5 35 10403.0 36 12004.5 37 13606.0 38 14816.5 39 18879.5 40 21732.0 41 30062.0 42 38392.0 43 50479.5 44 62567.0 45 75075.0 46 87583.0 47 91083.5 48 94584.0 49 89440.5 50 84297.0 51 72216.0 52 60135.0 53 53862.0 54 47589.0 55 43438.5 56 39288.0 57 38426.5 58 37565.0 59 38771.5 60 39978.0 61 35456.5 62 30935.0 63 28136.5 64 20858.5 65 16379.0 66 12953.5 67 9528.0 68 8064.5 69 6601.0 70 5777.5 71 4954.0 72 4052.5 73 3151.0 74 2721.0 75 2291.0 76 1854.5 77 1418.0 78 1067.5 79 717.0 80 558.5 81 400.0 82 285.5 83 171.0 84 111.0 85 51.0 86 47.5 87 44.0 88 24.5 89 3.5 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 797557.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.269453156326897 #Duplication Level Percentage of deduplicated Percentage of total 1 70.17444704047792 21.24142137462889 2 11.525028450083145 6.977126175902532 3 4.092728641671041 3.7165397370185698 4 2.0754076171837386 2.512858145945088 5 1.2493591347352824 1.890870890214937 6 0.9782193678433524 1.7766099198927638 7 0.7638867315432287 1.6185703546031196 8 0.6751252044197894 1.6348536599872348 9 0.6201072029528384 1.6893275338513654 >10 7.558129399342994 43.85532215793043 >50 0.20581581565041449 4.226305607072446 >100 0.06929685692426778 3.959272610690966 >500 0.008299024781349435 1.8025354113325949 >1k 0.004149512390674718 3.098386420929026 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 4837 0.6064770292280051 No Hit CCTGTCTCTTATACACATCTGACGCTCTAGTTGTCGTATGCCGTCTTCTGCT 3584 0.44937227057125695 TruSeq Adapter, Index 22 (95% over 23bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 3346 0.4195311432286344 No Hit GCTGTCTCTTATACACATCTGACGCTCTAGTTGTCGTATGCCGTCTTCTGCT 2991 0.3750202179906891 TruSeq Adapter, Index 22 (95% over 23bp) CTGTCTCTTATACACATCTGACGCTCTAGTTGTCGTATGCCGTCTTCTGCTT 2647 0.33188850452068 TruSeq Adapter, Index 20 (95% over 23bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2436 0.3054327151539012 No Hit GGGGCTGTCTCTTATACACATCTGACGCTCTAGTTGTCGTATGCCGTCTTCT 1379 0.1729030025440188 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 1350 0.16926689879218662 No Hit CGCTGTCTCTTATACACATCTGACGCTCTAGTTGTCGTATGCCGTCTTCTGC 1083 0.13578966769773193 TruSeq Adapter, Index 20 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCTCTAGTTGTCGTATGCCGTCTTCTGCT 1015 0.12726363131412552 TruSeq Adapter, Index 22 (95% over 23bp) GGGGTTGGGGATTTAGCCTGTCTCTTATACACATCTGACGCTCTAGTTGTCG 988 0.12387829333828178 No Hit ACCTGTCTCTTATACACATCTGACGCTCTAGTTGTCGTATGCCGTCTTCTGC 968 0.12137063557839753 TruSeq Adapter, Index 20 (95% over 21bp) GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCATA 936 0.11735838316258274 No Hit GCCTGTCTCTTATACACATCTGACGCTCTAGTTGTCGTATGCCGTCTTCTGC 911 0.11422381096272743 TruSeq Adapter, Index 22 (95% over 22bp) GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 820 0.10281396815525412 No Hit GGGCCTGTCTCTTATACACATCTGACGCTCTAGTTGTCGTATGCCGTCTTCT 803 0.1006824590593525 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3369038200404485 0.0 2 0.0 0.0 0.0 1.3926277369517164 0.0 3 0.0 0.0 0.0 2.2069895944741256 0.0 4 0.0 0.0 0.0 2.721059435250396 0.0 5 0.0 0.0 0.0 5.714952034776198 0.0 6 0.0 0.0 0.0 6.252468475607386 0.0 7 0.0 0.0 0.0 8.354136444166373 0.0 8 0.0 0.0 0.0 10.743558140672077 0.0 9 0.0 0.0 0.0 12.78140621924201 0.0 10 0.0 0.0 0.0 13.997244084121887 0.0 11 0.0 0.0 0.0 15.233143211080838 0.0 12 0.0 0.0 0.0 16.23006255352282 0.0 13 0.0 0.0 0.0 16.71429126695647 0.0 14 0.0 0.0 0.0 17.02511544629412 0.0 15 0.0 0.0 0.0 18.02792778447183 0.0 16 0.0 0.0 0.0 19.071991092799635 0.0 17 0.0 0.0 0.0 20.38500069587503 0.0 18 0.0 0.0 0.0 21.21879690103654 0.0 19 0.0 0.0 0.0 22.037672542526742 0.0 20 0.0 0.0 0.0 23.023558190825234 0.0 21 0.0 0.0 0.0 23.87979793293771 0.0 22 0.0 0.0 0.0 24.75672585156923 0.0 23 0.0 0.0 0.0 25.480435881071823 0.0 24 0.0 0.0 0.0 26.1069741723789 0.0 25 0.0 0.0 0.0 26.73025250859813 0.0 26 0.0 0.0 0.0 27.30676302759552 0.0 27 0.0 0.0 0.0 27.856692374338134 0.0 28 0.0 0.0 0.0 28.47620922391754 0.0 29 0.0 0.0 0.0 29.174466527157307 0.0 30 0.0 0.0 0.0 30.191196365902375 0.0 31 0.0 0.0 0.0 30.805196368410034 0.0 32 0.0 0.0 0.0 31.465086507923573 0.0 33 0.0 0.0 0.0 32.17450288819482 0.0 34 0.0 0.0 0.0 33.015696683748 0.0 35 1.2538288799421231E-4 0.0 0.0 33.60161091934495 0.0 36 1.2538288799421231E-4 0.0 0.0 34.21197481810078 0.0 37 1.2538288799421231E-4 0.0 0.0 34.920011986604095 0.0 38 1.2538288799421231E-4 0.0 0.0 35.74352679495008 0.0 39 2.5076577598842463E-4 0.0 0.0 36.439652589093946 0.0 40 2.5076577598842463E-4 0.0 0.0 37.13427378858188 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACGCG 20 6.3102855E-4 46.000004 14 AAACGTA 20 6.3102855E-4 46.000004 38 TTACGCG 20 6.3102855E-4 46.000004 12 CCGCATG 20 6.3102855E-4 46.000004 24 AGTCGAC 20 6.3102855E-4 46.000004 28 AAGGTAC 25 3.4162083E-5 46.0 15 TCGCTAA 25 3.4162083E-5 46.0 21 ACGTAGG 60 0.0 46.0 1 AGTACGG 55 1.8189894E-12 46.0 1 TATCCGG 60 0.0 46.0 1 TACGCGG 95 0.0 45.999996 1 TAACGGG 215 0.0 44.930233 2 CGTTTTT 1640 0.0 44.59756 1 CGAATAT 220 0.0 43.909092 14 ATTGCGG 110 0.0 43.909092 1 AATGCGG 155 0.0 43.032257 1 TACGAAT 225 0.0 42.933334 12 GCTACGA 225 0.0 42.933334 10 CACTAGG 65 0.0 42.46154 1 TTAACGG 65 0.0 42.46154 1 >>END_MODULE