##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545008_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1150432 Sequences flagged as poor quality 0 Sequence length 52 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.8948716656004 34.0 33.0 34.0 31.0 34.0 2 33.202585637395345 34.0 33.0 34.0 31.0 34.0 3 33.27822070317933 34.0 34.0 34.0 31.0 34.0 4 36.54084639509332 37.0 37.0 37.0 35.0 37.0 5 36.54110629746043 37.0 37.0 37.0 35.0 37.0 6 36.639431100664794 37.0 37.0 37.0 35.0 37.0 7 36.511804261355735 37.0 37.0 37.0 35.0 37.0 8 36.53853856638202 37.0 37.0 37.0 35.0 37.0 9 38.294568475146725 39.0 39.0 39.0 37.0 39.0 10 38.164163548997244 39.0 39.0 39.0 35.0 39.0 11 37.63381668799199 39.0 37.0 39.0 35.0 39.0 12 37.54926236405107 39.0 37.0 39.0 35.0 39.0 13 37.49194650357431 39.0 37.0 39.0 35.0 39.0 14 38.876144787349446 41.0 37.0 41.0 35.0 41.0 15 38.947245034908626 41.0 37.0 41.0 35.0 41.0 16 38.94866363244416 41.0 37.0 41.0 35.0 41.0 17 38.9994723721176 41.0 37.0 41.0 35.0 41.0 18 38.977944806820396 41.0 37.0 41.0 35.0 41.0 19 38.907274832410785 41.0 37.0 41.0 35.0 41.0 20 38.84147085616534 41.0 36.0 41.0 35.0 41.0 21 38.805367027342776 41.0 36.0 41.0 35.0 41.0 22 38.786868758866234 41.0 35.0 41.0 35.0 41.0 23 38.768683416316655 41.0 35.0 41.0 35.0 41.0 24 38.687869426441544 41.0 35.0 41.0 35.0 41.0 25 38.669884008789744 41.0 35.0 41.0 35.0 41.0 26 38.6053082668076 41.0 35.0 41.0 35.0 41.0 27 38.58128250952686 41.0 36.0 41.0 35.0 41.0 28 38.61205095129482 41.0 36.0 41.0 35.0 41.0 29 38.63848102278101 41.0 36.0 41.0 35.0 41.0 30 38.54173041083697 40.0 36.0 41.0 35.0 41.0 31 38.513116811771575 41.0 35.0 41.0 35.0 41.0 32 38.441455905259936 40.0 35.0 41.0 35.0 41.0 33 38.365932971266446 40.0 35.0 41.0 35.0 41.0 34 38.278648368612835 40.0 35.0 41.0 35.0 41.0 35 38.21397092570443 40.0 35.0 41.0 35.0 41.0 36 38.16374979138271 40.0 35.0 41.0 35.0 41.0 37 38.10719799171094 40.0 35.0 41.0 35.0 41.0 38 38.029481099274015 40.0 35.0 41.0 35.0 41.0 39 37.95403205056883 40.0 35.0 41.0 35.0 41.0 40 37.81461833467775 40.0 35.0 41.0 35.0 41.0 41 37.78706607604796 40.0 35.0 41.0 35.0 41.0 42 37.68841009290423 40.0 35.0 41.0 35.0 41.0 43 37.59769025896359 40.0 35.0 41.0 34.0 41.0 44 37.52891957108286 40.0 35.0 41.0 34.0 41.0 45 37.48371307474062 39.0 35.0 41.0 34.0 41.0 46 37.48464229089594 39.0 35.0 41.0 34.0 41.0 47 37.38579246752524 39.0 35.0 41.0 34.0 41.0 48 37.37343363188785 39.0 35.0 41.0 34.0 41.0 49 37.29686065756168 39.0 35.0 41.0 34.0 41.0 50 37.18274526438764 39.0 35.0 41.0 34.0 41.0 51 37.04328547884621 39.0 35.0 41.0 34.0 41.0 52 36.72605768963311 38.0 35.0 40.0 34.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 0.0 12 7.0 13 3.0 14 9.0 15 21.0 16 17.0 17 37.0 18 81.0 19 156.0 20 277.0 21 455.0 22 740.0 23 1292.0 24 2035.0 25 3572.0 26 5092.0 27 5900.0 28 6114.0 29 6575.0 30 7941.0 31 9484.0 32 12400.0 33 17536.0 34 52458.0 35 186045.0 36 40845.0 37 64561.0 38 122491.0 39 599389.0 40 4897.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.38902255848238 22.039546883257767 23.959434369002253 20.6119961892576 2 27.243244276932494 24.641873661372422 26.365487051820537 21.74939500987455 3 28.3111909265389 24.27844496676031 25.130820422241385 22.2795436844594 4 25.89409891240856 26.731523462490614 22.549789991933462 24.824587633167365 5 23.459100581346835 36.40241231120136 20.16998831743206 19.968498790019748 6 87.70661803565964 2.476461016383411 7.189560095685795 2.627360852271147 7 88.11281327362242 2.1950884537286863 5.3746766432088116 4.317421629440071 8 78.41454340630303 4.132186865455759 10.742051681455314 6.711218046785904 9 44.25876540290952 21.3731015827098 16.79647297710773 17.571660037272956 10 37.22749367194236 20.906928875413758 24.900124474979833 16.965452977664043 11 36.999926983950374 17.869026591749883 24.633702817724124 20.497343606575615 12 23.537332063085866 27.395274123112014 29.32159397513282 19.7457998386693 13 17.583220911796612 33.13224945064115 27.522530666740842 21.761998970821395 14 15.817970988289618 25.19001557675725 38.632531083975415 20.35948235097772 15 17.249433256376733 18.40917151122361 42.777930377458205 21.563464854941447 16 18.470365914717256 21.74365803454702 26.975605685516395 32.81037036521933 17 19.88670342966816 24.744269978581958 30.68577716892437 24.68324942282551 18 23.733345386776445 28.5780472031376 26.431896887430113 21.256710522655837 19 26.262743039136605 23.0974972879753 25.01938402269756 25.620375650190535 20 22.221826235709717 28.88280228644544 27.172401324024364 21.72297015382048 21 20.5632318989736 23.62060512920364 26.292297154460236 29.52386581736252 22 18.840661594948678 29.69241119857584 24.38623056382298 27.0806966426525 23 19.678955383716726 23.17529415037134 34.54102458902395 22.604725876887986 24 22.487465578148036 21.81580484548413 30.98149216989792 24.715237406469917 25 18.80832591582988 28.540496091902867 27.54791243637173 25.103265555895526 26 19.32326291340992 27.898911017774193 28.084145781758508 24.693680287057383 27 21.70193457761954 25.589517676837918 32.499878306583966 20.20866943895858 28 18.30173360963534 26.902763483630498 28.43853439403633 26.356968512697836 29 23.329149397791436 25.702518706016527 27.098429111846677 23.86990278434536 30 25.566569775527803 27.062529554115322 22.635410002503406 24.735490667853465 31 26.406428193930626 26.99064351478401 22.17923354009624 24.423694751189117 32 23.755250201663376 30.78208881533198 22.21974006286334 23.2429209201413 33 19.077268365274957 27.428479040916802 24.34650635587327 29.147746237934967 34 19.64540277043754 28.65593098940224 25.149335206252953 26.549331033907265 35 25.021296347806736 27.70063767350004 22.594468860393313 24.683597118299907 36 20.592090623348447 31.55197351951267 23.230403883063058 24.625531974075827 37 19.808124252454732 31.44723025785096 24.458811994103087 24.285833495591223 38 17.977681427498542 30.61354343411866 23.72960766042669 27.679167477956106 39 24.617448054296126 26.129575672443046 26.481095797057108 22.77188047620372 40 17.0821917331924 24.685770215014884 30.79721356846819 27.434824483324526 41 21.326075769797782 28.895927790603874 23.169035631832216 26.608960807766124 42 21.197254596534172 24.925071625267726 26.291427915774246 27.58624586242385 43 22.65314247169759 27.344075964507248 26.379916414007955 23.622865149787213 44 20.373650941559347 29.050391505104166 24.66490848655114 25.911049066785345 45 22.397760145753942 27.103036076882425 24.355894133681957 26.14330964368168 46 23.500215571194126 26.383219521014716 25.187407860699285 24.929157047091874 47 20.632075602903953 25.991888264582347 28.42723429111847 24.948801841395234 48 19.501630691774917 23.69970584962866 26.35462156824567 30.444041890350753 49 20.228661928736337 25.811695084976773 29.07377402575728 24.88586896052961 50 19.213564991238073 26.85234763984312 27.329820450057024 26.604266918861786 51 20.33123209368307 23.155301660593587 27.63501015270785 28.878456093015494 52 21.001675892186586 21.838318127451252 31.141779783594338 26.018226196767824 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 111.0 1 289.5 2 468.0 3 2114.0 4 3760.0 5 2597.5 6 1435.0 7 1542.5 8 1650.0 9 1699.5 10 1749.0 11 1702.0 12 1655.0 13 1555.5 14 1419.5 15 1383.0 16 1366.5 17 1350.0 18 1198.5 19 1047.0 20 1131.5 21 1216.0 22 1407.5 23 1599.0 24 2035.5 25 2472.0 26 2813.5 27 3155.0 28 4683.0 29 6211.0 30 6856.5 31 7502.0 32 9199.0 33 10896.0 34 12223.5 35 13551.0 36 15755.5 37 17960.0 38 21248.0 39 29089.0 40 33642.0 41 44666.5 42 55691.0 43 76917.0 44 98143.0 45 116859.0 46 135575.0 47 138110.5 48 140646.0 49 132266.0 50 123886.0 51 110514.0 52 97142.0 53 83745.0 54 70348.0 55 63346.0 56 56344.0 57 52425.5 58 48507.0 59 47437.0 60 46367.0 61 43812.5 62 41258.0 63 39150.5 64 30242.5 65 23442.0 66 18998.5 67 14555.0 68 10954.0 69 7353.0 70 6454.0 71 5555.0 72 4676.0 73 3797.0 74 3331.0 75 2865.0 76 2288.0 77 1711.0 78 1240.5 79 770.0 80 543.5 81 317.0 82 271.0 83 225.0 84 127.5 85 30.0 86 41.5 87 53.0 88 26.5 89 1.0 90 2.0 91 2.0 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1150432.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.29391546409028 #Duplication Level Percentage of deduplicated Percentage of total 1 68.71092771125166 16.692574692763664 2 12.426012822934952 6.037530101521671 3 5.061921429627132 3.689216738916857 4 2.4640510478801283 2.394457914256116 5 1.4161830413798406 1.7202315544480058 6 0.942584021179431 1.3739433917001225 7 0.6574942418409605 1.1181176670587296 8 0.49250993174058444 0.9571995717544506 9 0.4095860213064213 0.8955403359202151 >10 6.374617036147303 41.02833237120237 >50 0.8861857676545339 13.455880734976406 >100 0.14536455785935393 5.976562435382704 >500 0.006101722181749323 1.0903099851477982 >1k 0.005742797347528774 2.653575933142818 >5k 7.178496684410967E-4 0.916526571808102 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 5287 0.45956649328252347 No Hit CCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGCT 5224 0.4540902895607911 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 3640 0.3164028817000918 No Hit GCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGCT 3531 0.3069281800228088 No Hit CTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGCTT 3401 0.29562807710494843 Illumina Single End Adapter 2 (95% over 21bp) GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 2682 0.23312981558232035 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA 2529 0.21983046368668466 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1909 0.16593766515535033 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 1631 0.14177282968484883 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGAA 1526 0.13264582348196155 No Hit TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 1486 0.1291688687380045 No Hit ACCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGC 1365 0.11865108063753443 No Hit TCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGCT 1276 0.11091485633222997 No Hit CGCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGC 1183 0.10283093655252983 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3018865956440711 0.0 2 0.0 0.0 0.0 1.275260076214848 0.0 3 8.692386859892631E-5 0.0 0.0 1.9941204695279686 0.0 4 8.692386859892631E-5 0.0 0.0 2.445689966899391 0.0 5 8.692386859892631E-5 0.0 0.0 5.0796570331840565 0.0 6 8.692386859892631E-5 0.0 0.0 5.54078815610136 0.0 7 8.692386859892631E-5 0.0 0.0 7.641564212400211 0.0 8 8.692386859892631E-5 0.0 0.0 9.843258880142416 0.0 9 8.692386859892631E-5 0.0 0.0 11.74141539873717 0.0 10 8.692386859892631E-5 0.0 0.0 12.822400628633417 0.0 11 8.692386859892631E-5 0.0 0.0 13.866530138243721 0.0 12 2.607716057967789E-4 0.0 0.0 14.76280214736725 0.0 13 3.4769547439570525E-4 0.0 0.0 15.111540708186142 0.0 14 3.4769547439570525E-4 0.0 0.0 15.373007704931712 0.0 15 3.4769547439570525E-4 0.0 0.0 16.318304775945037 0.0 16 3.4769547439570525E-4 0.0 0.0 17.320710828627856 0.0 17 3.4769547439570525E-4 0.0 0.0 18.797199660649216 0.0 18 3.4769547439570525E-4 0.0 0.0 19.38854273872771 0.0 19 3.4769547439570525E-4 0.0 0.0 20.09723303941476 0.0 20 3.4769547439570525E-4 0.0 0.0 20.99880740452282 0.0 21 3.4769547439570525E-4 0.0 0.0 21.81658716030152 0.0 22 3.4769547439570525E-4 0.0 0.0 22.748758727156407 0.0 23 3.4769547439570525E-4 0.0 0.0 23.400600817779758 0.0 24 3.4769547439570525E-4 0.0 0.0 23.989249255931686 0.0 25 3.4769547439570525E-4 0.0 0.0 24.546952796862396 0.0 26 3.4769547439570525E-4 0.0 0.0 25.089183889182497 0.0 27 3.4769547439570525E-4 0.0 0.0 25.649668993908374 0.0 28 4.346193429946316E-4 0.0 0.0 26.177644571778252 0.0 29 5.215432115935579E-4 0.0 0.0 26.806538761091485 0.0 30 5.215432115935579E-4 0.0 0.0 27.44986231259214 0.0 31 5.215432115935579E-4 0.0 0.0 27.985226419292925 0.0 32 5.215432115935579E-4 0.0 0.0 28.523545937526077 0.0 33 5.215432115935579E-4 0.0 0.0 29.04865302773219 0.0 34 5.215432115935579E-4 0.0 0.0 29.814191538482934 0.0 35 5.215432115935579E-4 0.0 0.0 30.347817167811744 0.0 36 5.215432115935579E-4 0.0 0.0 30.902565297210092 0.0 37 5.215432115935579E-4 0.0 0.0 31.43688631748769 0.0 38 5.215432115935579E-4 0.0 0.0 32.05500194709466 0.0 39 6.084670801924842E-4 0.0 0.0 32.60253539539929 0.0 40 6.084670801924842E-4 0.0 0.0 33.14554880253679 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTATCCG 35 1.01957994E-7 46.000004 39 CGACGGT 150 0.0 46.0 27 GCGAACG 20 6.311458E-4 46.0 24 TAGGTCG 20 6.311458E-4 46.0 41 ATTCGGC 30 1.8614046E-6 46.0 16 TACGGGT 120 0.0 46.0 3 TTATCGG 25 3.417158E-5 46.0 1 TACTCGC 25 3.417158E-5 46.0 44 CCGAATA 20 6.311458E-4 46.0 10 GCGTATA 20 6.311458E-4 46.0 30 ATAGCGG 185 0.0 44.756756 1 CACGACG 175 0.0 44.685715 25 CGGGATA 165 0.0 44.606064 5 CGGTCTA 155 0.0 44.51613 30 ACGGGAT 205 0.0 43.756096 4 CGGGTAT 285 0.0 43.57895 5 TACGCGG 185 0.0 43.513515 1 CTAGGGT 150 0.0 42.93333 3 CGTTTTT 1715 0.0 42.915455 1 CATGCGG 215 0.0 42.790695 1 >>END_MODULE