##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545006_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1397529 Sequences flagged as poor quality 0 Sequence length 52 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.86484716953995 34.0 33.0 34.0 31.0 34.0 2 33.18445627961924 34.0 33.0 34.0 31.0 34.0 3 33.244171677296144 34.0 33.0 34.0 31.0 34.0 4 36.549192181342924 37.0 37.0 37.0 35.0 37.0 5 36.49605124473267 37.0 37.0 37.0 35.0 37.0 6 36.59964551719499 37.0 37.0 37.0 35.0 37.0 7 36.45271618692707 37.0 37.0 37.0 35.0 37.0 8 36.48256100588968 37.0 37.0 37.0 35.0 37.0 9 38.29306082378255 39.0 39.0 39.0 37.0 39.0 10 38.109168396505545 39.0 39.0 39.0 35.0 39.0 11 37.51396715202332 39.0 35.0 39.0 35.0 39.0 12 37.41920346554526 39.0 35.0 39.0 35.0 39.0 13 37.342344237579326 39.0 35.0 39.0 35.0 39.0 14 38.70915880815353 41.0 36.0 41.0 35.0 41.0 15 38.76840981475161 41.0 36.0 41.0 35.0 41.0 16 38.77557818120411 41.0 36.0 41.0 35.0 41.0 17 38.81729609904338 41.0 36.0 41.0 35.0 41.0 18 38.80120841857307 41.0 36.0 41.0 35.0 41.0 19 38.729366617794696 41.0 36.0 41.0 35.0 41.0 20 38.66248714695724 41.0 35.0 41.0 35.0 41.0 21 38.61821185821547 41.0 35.0 41.0 35.0 41.0 22 38.55926925308884 40.0 35.0 41.0 35.0 41.0 23 38.54994279188482 40.0 35.0 41.0 35.0 41.0 24 38.49823009039526 40.0 35.0 41.0 35.0 41.0 25 38.42318620937383 40.0 35.0 41.0 35.0 41.0 26 38.36280892918859 40.0 35.0 41.0 35.0 41.0 27 38.307187900930856 40.0 35.0 41.0 35.0 41.0 28 38.34524793403214 40.0 35.0 41.0 35.0 41.0 29 38.34657169904882 40.0 35.0 41.0 35.0 41.0 30 38.271673074404895 40.0 35.0 41.0 35.0 41.0 31 38.238930283378735 40.0 35.0 41.0 35.0 41.0 32 38.15223870130781 40.0 35.0 41.0 35.0 41.0 33 38.007378737757854 40.0 35.0 41.0 35.0 41.0 34 37.94643903632769 40.0 35.0 41.0 35.0 41.0 35 37.86546683467749 40.0 35.0 41.0 35.0 41.0 36 37.77885181631294 40.0 35.0 41.0 34.0 41.0 37 37.743855047015124 40.0 35.0 41.0 35.0 41.0 38 37.64557300778731 40.0 35.0 41.0 35.0 41.0 39 37.54024853867075 40.0 35.0 41.0 34.0 41.0 40 37.44734599425128 40.0 35.0 41.0 34.0 41.0 41 37.41365438570506 39.0 35.0 41.0 34.0 41.0 42 37.34510768649523 39.0 35.0 41.0 34.0 41.0 43 37.26916650745709 39.0 35.0 41.0 34.0 41.0 44 37.2061853457066 39.0 35.0 41.0 34.0 41.0 45 37.13555711545163 39.0 35.0 41.0 34.0 41.0 46 37.138514478053764 39.0 35.0 41.0 34.0 41.0 47 37.066080202986846 39.0 35.0 41.0 34.0 41.0 48 37.04322557886098 39.0 35.0 41.0 34.0 41.0 49 37.0122358820461 39.0 35.0 41.0 34.0 41.0 50 36.941880275829696 38.0 35.0 41.0 34.0 41.0 51 36.88176703309914 38.0 35.0 41.0 34.0 41.0 52 36.666934281864634 38.0 35.0 41.0 34.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 4.0 12 5.0 13 7.0 14 17.0 15 35.0 16 46.0 17 80.0 18 146.0 19 265.0 20 435.0 21 736.0 22 1170.0 23 1892.0 24 3091.0 25 4904.0 26 6789.0 27 7856.0 28 8356.0 29 9157.0 30 10666.0 31 13137.0 32 16912.0 33 24441.0 34 82518.0 35 226965.0 36 58754.0 37 92701.0 38 157607.0 39 664343.0 40 4494.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.06842577148667 21.4764774112022 22.563395822197606 18.89170099511352 2 30.959285996927434 23.099484876521345 23.99506557645673 21.94616355009449 3 29.7095802663129 23.891883460021223 24.15205695194876 22.246479321717118 4 27.761284381218566 25.784008775488736 21.53329197462092 24.921414868671775 5 24.815299002739835 34.51033932032895 22.06072289018689 18.613638786744318 6 84.34594201623008 2.8281345145610577 9.77739996808653 3.0485235011223377 7 85.74441031277348 3.0716357227649658 6.604299445664455 4.579654518797105 8 74.71451397430751 5.211126209187788 12.99078587993523 7.083573936569473 9 50.89590269683134 18.330925512100286 16.05247547635863 14.72069631470975 10 40.19158099760362 20.25381941984746 25.146311811776357 14.408287770772557 11 36.878733822339285 18.30115868794136 24.74431657589932 20.075790913820036 12 24.125366987017802 25.31024400924775 30.72916554862189 19.835223455112562 13 18.94229028521054 27.273566416153084 32.90550679091454 20.878636507721843 14 17.954618473033477 22.284975839499573 39.57957223070147 20.180833456765477 15 20.619965667975404 19.606605658988112 38.75189709837864 21.021531574657843 16 22.36833725811772 21.358340327821463 28.049507380526627 28.223815033534187 17 21.997683053446476 22.61699041665683 30.573533715579426 24.811792814317272 18 24.077496781819914 26.472223474432372 28.49171645096452 20.958563292783193 19 25.49227958775811 23.614035916249325 25.48948894799321 25.404195547999365 20 23.255188264429574 29.019004256798965 26.79751189420756 20.928295584563898 21 22.399463624726213 22.702283816650674 28.044426985057196 26.853825573565913 22 20.909333545135738 25.840036235384023 26.659053228949098 26.591576990531145 23 22.098360749580152 22.24791041903245 32.733202674148444 22.920526157238953 24 24.55355130376543 20.904181594800537 29.330053258286593 25.212213843147442 25 18.971198450980268 25.814419593439563 29.42665232707157 25.787729628508604 26 19.65562074203827 25.668733886738664 28.060669939586226 26.61497543163684 27 22.434597063817638 24.524213808801104 30.71957719660916 22.321611930772097 28 20.076005578417337 24.72227767724319 27.887006280370567 27.314710463968904 29 22.308660500068335 23.70169062681347 27.13646729334418 26.853181579774017 30 26.253551804649494 22.628582304911024 25.513531382890804 25.604334507548682 31 28.543164399450742 23.025640255050163 22.634163584440824 25.79703176105827 32 25.78458121441487 22.505364826060855 23.918573424952182 27.791480534572095 33 19.662060679957268 24.039501148097823 28.982368165526438 27.31607000641847 34 22.69512833007401 21.460019792075872 27.67212701847332 28.172724859376803 35 28.0362697303598 22.71008329701924 23.518223950987778 25.73542302163318 36 23.219267721814717 25.118834743321962 26.216486384182367 25.445411150680954 37 24.23069574942631 25.365055036425005 26.3571632502796 24.047085963869087 38 23.918072540891817 23.234294243625715 26.240886593408796 26.606746622073672 39 27.52150402603452 21.12671722733482 27.028133226573477 24.323645520057184 40 20.717065620820748 20.109779475059195 31.338741450087976 27.83441345403208 41 21.849636036175276 22.95673291931688 25.835385169109195 29.358245875398648 42 21.678906126456052 19.906062772221542 29.508868867837446 28.906162233484956 43 22.7376319203394 23.909700621597118 27.661393788608322 25.69127366945516 44 20.398789577890692 24.790970348379172 26.234375100624028 28.575864973106103 45 22.62156992806589 23.885801296431058 26.073877536709432 27.418751238793615 46 24.822168269853435 20.910049093793404 28.114550753508517 26.15323188284465 47 22.352881407112125 20.30483803913908 30.84079113921786 26.501489414530933 48 21.953676810999987 20.017831472549048 27.957416268284952 30.071075448166013 49 22.53477387589095 21.94079693516199 29.890327857239456 25.63410133170761 50 21.606206382837136 22.610478923872062 28.775717713192357 27.007596980098448 51 21.593040287536073 19.91915731265684 28.53114318200195 29.956659217805143 52 22.456564407608 18.249496074857838 32.683972926500985 26.609966591033174 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 238.0 1 543.5 2 849.0 3 3827.0 4 6805.0 5 4403.5 6 2002.0 7 2182.0 8 2362.0 9 2265.5 10 2169.0 11 2150.5 12 2132.0 13 1983.5 14 1770.0 15 1705.0 16 1749.5 17 1794.0 18 1736.0 19 1678.0 20 1918.5 21 2159.0 22 2374.5 23 2590.0 24 2808.0 25 3026.0 26 3965.0 27 4904.0 28 6345.5 29 7787.0 30 8864.0 31 9941.0 32 11157.5 33 12374.0 34 15025.0 35 17676.0 36 20591.0 37 23506.0 38 25173.0 39 29410.5 40 31981.0 41 40837.5 42 49694.0 43 62146.0 44 74598.0 45 81517.0 46 88436.0 47 94392.5 48 100349.0 49 119879.5 50 139410.0 51 147330.5 52 155251.0 53 145285.5 54 135320.0 55 117934.5 56 100549.0 57 90341.5 58 80134.0 59 76318.5 60 72503.0 61 66655.0 62 60807.0 63 56713.5 64 45045.5 65 37471.0 66 32202.5 67 26934.0 68 22395.5 69 17857.0 70 15704.0 71 13551.0 72 11551.5 73 9552.0 74 8012.5 75 6473.0 76 5725.0 77 4977.0 78 3788.5 79 2600.0 80 1756.5 81 913.0 82 850.0 83 787.0 84 490.0 85 193.0 86 153.5 87 114.0 88 70.5 89 38.0 90 49.0 91 27.0 92 5.0 93 3.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1397529.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.668952603463346 #Duplication Level Percentage of deduplicated Percentage of total 1 70.31925644359714 18.050216607614793 2 11.844705249814751 6.0808235531897665 3 4.314259043585186 3.322275327265537 4 2.0962801237759776 2.152372605631514 5 1.231422462583682 1.5804662413450328 6 0.8070573878318734 1.2429790701918775 7 0.6270933742598819 1.1267781071275966 8 0.5141623122446635 1.055840641879631 9 0.44513092537336985 1.028344016317033 >10 7.1713605904834585 45.16470018548945 >50 0.4921123146121443 8.200267900265837 >100 0.12092453355780557 5.419364757162945 >500 0.01035696235113412 1.782360549132627 >1k 0.004758604323494055 2.1245197418670285 >5k 0.0011196716055280132 1.6686906955194765 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 7739 0.553763106168101 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 5288 0.3783821301740429 No Hit CCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTGCT 5162 0.36936621708744505 Illumina Single End Adapter 2 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTGCT 5035 0.36027874913508057 Illumina Single End Adapter 2 (95% over 21bp) CTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTGCTT 4240 0.30339263085059415 Illumina Single End Adapter 2 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3692 0.2641805644104702 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 2793 0.19985274008625223 No Hit GGGGCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCT 1952 0.13967509797649996 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 1684 0.12049839395103787 No Hit ACCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTGC 1586 0.1134860171059062 No Hit TCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTGCT 1511 0.1081194021734075 Illumina Single End Adapter 2 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTGC 1450 0.10375455536164187 No Hit GCCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTGC 1414 0.1011785801940425 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.155486576664956E-5 0.0 0.0 0.3104765625614925 0.0 2 7.155486576664956E-5 0.0 0.0 1.2527825898425007 0.0 3 7.155486576664956E-5 0.0 0.0 1.9836439887830593 0.0 4 7.155486576664956E-5 0.0 0.0 2.4584820780105456 0.0 5 7.155486576664956E-5 0.0 0.0 5.205902703986823 0.0 6 7.155486576664956E-5 0.0 0.0 5.740560660995228 0.0 7 7.155486576664956E-5 0.0 0.0 7.632256647268142 0.0 8 7.155486576664956E-5 0.0 0.0 9.786129661710062 0.0 9 7.155486576664956E-5 0.0 0.0 11.583301670305232 0.0 10 7.155486576664956E-5 0.0 0.0 12.698555808144231 0.0 11 7.155486576664956E-5 0.0 0.0 13.791914157058637 0.0 12 7.155486576664956E-5 0.0 0.0 14.706456896422186 0.0 13 7.155486576664956E-5 0.0 0.0 15.16125962323501 0.0 14 7.155486576664956E-5 0.0 0.0 15.423794425732847 0.0 15 7.155486576664956E-5 0.0 0.0 16.31114631610507 0.0 16 1.4310973153329912E-4 0.0 0.0 17.214454941543252 0.0 17 1.4310973153329912E-4 0.0 0.0 18.376291296996342 0.0 18 1.4310973153329912E-4 0.0 0.0 19.057493619094846 0.0 19 1.4310973153329912E-4 0.0 0.0 19.752720694883614 0.0 20 2.146645972999487E-4 0.0 0.0 20.61409816898254 0.0 21 2.146645972999487E-4 0.0 0.0 21.39404620583902 0.0 22 2.146645972999487E-4 0.0 0.0 22.20769658447159 0.0 23 2.146645972999487E-4 0.0 0.0 22.835805196171243 0.0 24 4.293291945998974E-4 0.0 0.0 23.37997995032661 0.0 25 4.293291945998974E-4 0.0 0.0 23.93953900062181 0.0 26 4.293291945998974E-4 0.0 0.0 24.474697841690585 0.0 27 4.293291945998974E-4 0.0 0.0 24.964777117326367 0.0 28 5.00884060366547E-4 0.0 0.0 25.500508397321273 0.0 29 5.724389261331965E-4 0.0 0.0 26.11137228637116 0.0 30 5.724389261331965E-4 0.0 0.0 27.020119081607607 0.0 31 5.724389261331965E-4 0.0 0.0 27.56014365354851 0.0 32 5.724389261331965E-4 0.0 0.0 28.11483697297158 0.0 33 5.724389261331965E-4 0.0 0.0 28.745163785509998 0.0 34 5.724389261331965E-4 0.0 0.0 29.480890915322686 0.0 35 5.724389261331965E-4 0.0 0.0 30.043669934577387 0.0 36 6.439937918998461E-4 0.0 0.0 30.601153893765353 0.0 37 7.155486576664957E-4 0.0 0.0 31.189692664696047 0.0 38 7.155486576664957E-4 0.0 0.0 31.94795957722523 0.0 39 7.155486576664957E-4 0.0 0.0 32.50852039564116 0.0 40 7.155486576664957E-4 0.0 0.0 33.04511033402527 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCCGT 20 6.3119235E-4 46.000004 21 AATACGA 20 6.3119235E-4 46.000004 17 AATGCGG 165 0.0 44.60606 1 CGTTTTT 2435 0.0 43.16632 1 ATAGCGG 150 0.0 42.933334 1 TAGTAGG 280 0.0 41.89286 1 CGCACTT 1000 0.0 41.86 34 GCATAGG 275 0.0 41.81818 1 CATGCGG 210 0.0 41.619045 1 CACTTAC 1005 0.0 41.422886 36 ACGTAGG 100 0.0 41.4 1 ATACCGG 50 8.731149E-10 41.4 1 ATCAACG 1145 0.0 41.379917 14 TTATGAC 1090 0.0 41.357796 26 CAACGCA 1125 0.0 41.297775 16 AACGCAA 1130 0.0 41.115044 17 TATGACC 1080 0.0 41.101852 27 ACGCAAG 1125 0.0 41.09333 18 GCTTATG 1100 0.0 40.981815 24 TACGCGG 180 0.0 40.88889 1 >>END_MODULE