##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545002_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 413566 Sequences flagged as poor quality 0 Sequence length 52 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.875187999013455 34.0 33.0 34.0 31.0 34.0 2 33.17747348669862 34.0 33.0 34.0 31.0 34.0 3 33.22183641788735 34.0 33.0 34.0 31.0 34.0 4 36.53814143328997 37.0 37.0 37.0 35.0 37.0 5 36.53438387101454 37.0 37.0 37.0 35.0 37.0 6 36.6455874032198 37.0 37.0 37.0 35.0 37.0 7 36.48658738871184 37.0 37.0 37.0 35.0 37.0 8 36.51224230231692 37.0 37.0 37.0 35.0 37.0 9 38.29103939879003 39.0 39.0 39.0 37.0 39.0 10 38.117287204460716 39.0 39.0 39.0 35.0 39.0 11 37.567082400390746 39.0 37.0 39.0 35.0 39.0 12 37.5198904165236 39.0 37.0 39.0 35.0 39.0 13 37.511869931280614 39.0 35.0 39.0 35.0 39.0 14 38.87040762538506 41.0 37.0 41.0 35.0 41.0 15 38.9306930453664 41.0 37.0 41.0 35.0 41.0 16 38.9291527833526 41.0 37.0 41.0 35.0 41.0 17 38.97334161899189 41.0 37.0 41.0 35.0 41.0 18 38.954846384857554 41.0 37.0 41.0 35.0 41.0 19 38.86192772133106 41.0 37.0 41.0 35.0 41.0 20 38.78291493981614 41.0 35.0 41.0 35.0 41.0 21 38.74235793077767 41.0 35.0 41.0 35.0 41.0 22 38.718613232228954 41.0 35.0 41.0 35.0 41.0 23 38.70545692827747 41.0 35.0 41.0 35.0 41.0 24 38.65943041739408 41.0 35.0 41.0 35.0 41.0 25 38.635963788125714 41.0 35.0 41.0 35.0 41.0 26 38.596606103983405 41.0 35.0 41.0 35.0 41.0 27 38.56925134077753 41.0 36.0 41.0 35.0 41.0 28 38.5932450926817 40.0 36.0 41.0 35.0 41.0 29 38.59899024581324 40.0 36.0 41.0 35.0 41.0 30 38.51270172112795 40.0 36.0 41.0 35.0 41.0 31 38.45451511971487 40.0 35.0 41.0 35.0 41.0 32 38.35183985143846 40.0 35.0 41.0 35.0 41.0 33 38.248811556075694 40.0 35.0 41.0 35.0 41.0 34 38.1487477210409 40.0 35.0 41.0 35.0 41.0 35 38.09969388199223 40.0 35.0 41.0 35.0 41.0 36 38.014691729977805 40.0 35.0 41.0 35.0 41.0 37 37.956814631763734 40.0 35.0 41.0 35.0 41.0 38 37.897007974543364 40.0 35.0 41.0 35.0 41.0 39 37.82065015015741 40.0 35.0 41.0 35.0 41.0 40 37.732149161197974 40.0 35.0 41.0 34.0 41.0 41 37.71913551887728 40.0 35.0 41.0 34.0 41.0 42 37.627416180246925 40.0 35.0 41.0 35.0 41.0 43 37.554750632305364 40.0 35.0 41.0 34.0 41.0 44 37.49170628146415 40.0 35.0 41.0 34.0 41.0 45 37.43854668904117 40.0 35.0 41.0 34.0 41.0 46 37.46825174216449 40.0 35.0 41.0 34.0 41.0 47 37.40217039118303 39.0 35.0 41.0 34.0 41.0 48 37.42608193129996 40.0 35.0 41.0 34.0 41.0 49 37.37073163654652 39.0 35.0 41.0 34.0 41.0 50 37.27146573944667 39.0 35.0 41.0 34.0 41.0 51 37.20993988867557 39.0 35.0 41.0 34.0 41.0 52 37.00236721587365 39.0 35.0 41.0 34.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 2.0 14 3.0 15 6.0 16 9.0 17 12.0 18 34.0 19 53.0 20 88.0 21 159.0 22 289.0 23 503.0 24 845.0 25 1590.0 26 2084.0 27 2501.0 28 2512.0 29 2610.0 30 2863.0 31 3636.0 32 4660.0 33 6228.0 34 17021.0 35 69823.0 36 14412.0 37 22044.0 38 39336.0 39 217979.0 40 2263.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.44609082951693 23.045414758466606 25.021399244618753 19.487095167397705 2 26.922425924761704 24.334930821199034 26.622594700724918 22.120048553314344 3 24.99020712534396 24.832070334601973 27.315833506622884 22.861889033431183 4 25.52192394926082 27.23966670374257 24.454379712065304 22.784029634931304 5 23.328803625056217 35.65984631231775 21.26964015417128 19.74170990845476 6 85.07420822794911 2.695337624466228 9.17241746178361 3.058036685801057 7 86.02447976864636 2.3459375287136757 6.5148005396962025 5.114782162943762 8 74.3970732603744 5.016128018260689 13.177340497042794 7.409458224322115 9 46.517121813688746 19.36788807590566 17.3084828056465 16.806507304759094 10 37.07509804964625 21.328881000855972 27.845374136171735 13.750646813326048 11 34.538139015296224 18.19274311718081 28.32994008211507 18.93917778540789 12 20.85350343113312 29.907680998921577 30.63984950406948 18.59896606587582 13 14.819883646141124 32.72343471175097 31.75623721485809 20.700444427249824 14 13.019929104423477 24.606471518451713 41.531702315954405 20.841897061170407 15 15.820933055425252 19.333794364140186 43.91826213953758 20.92701044089698 16 16.165980762441787 23.366766126809264 28.49001126785084 31.977241842898113 17 19.034930337600287 23.09474183080814 33.56441293529932 24.30591489629225 18 22.71898560326526 27.12239400724431 29.108775866488056 21.049844523002374 19 23.805631991024406 23.315988258222387 27.381844735785826 25.49653501496738 20 19.13576067665137 29.749786007553812 29.301248168369742 21.813205147425077 21 19.36861347402833 25.226928712708492 27.597529777592932 27.806928035670243 22 17.213455651576773 28.989326975621786 24.9437816454931 28.853435727308334 23 17.063781838932602 23.513780146336984 37.27047194401861 22.151966070711808 24 19.172997780281744 22.67401091965974 34.039548705647945 24.113442594410568 25 15.505868470812398 29.888578848357938 30.216458799804624 24.389093881025037 26 17.40907134532336 27.773076123278994 28.991503169989798 25.826349361407853 27 20.09425339607221 25.864795461909345 34.472369585507515 19.56858155651093 28 16.715107141302717 23.98214553420736 30.964102464902822 28.338644859587102 29 18.220791844590707 25.977957569045813 30.450762393426928 25.350488192936556 30 26.21975694326903 24.546021674895904 23.71108843570313 25.523132946131938 31 23.54690666060556 24.89663076751957 25.388934293438048 26.167528278436812 32 23.551500848715804 25.538124507333777 24.898565162513357 26.01180948143706 33 19.02018057577267 24.779599870395536 26.20331458582185 29.99690496800994 34 18.692300624325984 26.067665136882628 27.723749050937457 27.516285187853935 35 27.20750738697088 21.459694462310733 24.404085442226876 26.92871270849151 36 19.527475662892986 29.080727139078167 25.425929597694203 25.96586760033465 37 20.634916796835327 27.30809592664774 26.718105453543085 25.338881822973843 38 19.795389369532312 28.995130160603143 24.2648090026743 26.944671467190247 39 25.1270655711543 25.010518272778707 26.53071093852009 23.331705217546897 40 17.396981376612196 23.518374334447223 30.891320853261632 28.193323435678945 41 21.43551452488841 25.696503097449984 25.115459201191587 27.752523176470017 42 21.561491998858706 22.198149751188446 28.307936339060753 27.932421910892096 43 22.057180716016305 24.88720059192487 26.984568363937072 26.071050328121753 44 17.1689645667197 28.07024755419933 27.01285889072119 27.747928988359778 45 21.983431906878227 25.21169535213243 26.192917212730254 26.61195552825909 46 23.30873427699569 23.780726655479416 27.06146056494006 25.849078502584838 47 20.829081694336576 20.985525889458998 31.76687638732391 26.418516028880518 48 20.0483115149698 20.36240890208576 27.85238631802421 31.73689326492023 49 20.740583123370875 23.014706237940256 30.79508470232079 25.449625936368076 50 19.861642398069474 24.015755647224385 28.623726321796276 27.498875632909865 51 19.393035210824873 21.78032043253072 29.64750487225739 29.17913948438701 52 20.519820294705077 20.296397672922822 34.681042445462154 24.50273958690995 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 77.0 1 145.5 2 214.0 3 1111.0 4 2008.0 5 1359.5 6 711.0 7 775.0 8 839.0 9 838.0 10 837.0 11 865.5 12 894.0 13 839.0 14 804.5 15 825.0 16 737.5 17 650.0 18 609.5 19 569.0 20 621.5 21 674.0 22 858.0 23 1042.0 24 1027.0 25 1012.0 26 1291.5 27 1571.0 28 1971.5 29 2372.0 30 2867.5 31 3363.0 32 3995.5 33 4628.0 34 5641.5 35 6655.0 36 6913.5 37 7172.0 38 8422.5 39 11092.0 40 12511.0 41 16013.5 42 19516.0 43 24131.5 44 28747.0 45 32332.0 46 35917.0 47 38275.0 48 40633.0 49 46185.0 50 51737.0 51 52336.5 52 52936.0 53 46655.5 54 40375.0 55 33466.5 56 26558.0 57 21755.5 58 16953.0 59 14448.0 60 11943.0 61 10995.5 62 10048.0 63 8592.0 64 5740.0 65 4344.0 66 3509.5 67 2675.0 68 2163.0 69 1651.0 70 1404.5 71 1158.0 72 1021.0 73 884.0 74 694.0 75 504.0 76 465.5 77 427.0 78 326.5 79 226.0 80 148.0 81 70.0 82 51.5 83 33.0 84 22.0 85 11.0 86 6.0 87 1.0 88 1.5 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 413566.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.606481593182906 #Duplication Level Percentage of deduplicated Percentage of total 1 71.75348087096218 26.266424767496783 2 11.153602649656586 8.165883001846597 3 3.902965471468968 4.286215010704716 4 2.0261425186452477 2.9667979525581005 5 1.3378260804413313 2.4486552894277813 6 1.006959170451474 2.2116739402931165 7 0.8783746359491926 2.2507943459955 8 0.8140001580931592 2.383814544326816 9 0.7261006906025346 2.3921992408805166 >10 6.216153727815609 37.55735842381098 >50 0.13086027645487908 3.2857338457720258 >100 0.04758555507450149 3.357346924216066 >500 0.00330455243572927 0.748550218600887 >1k 0.002643641948583416 1.678552494070121 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTCTGCT 2301 0.5563803600876281 Illumina Single End Adapter 2 (95% over 22bp) CTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTCTGCTT 1855 0.4485378391840722 Illumina Single End Adapter 2 (95% over 23bp) GCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTCTGCT 1687 0.4079155443145713 Illumina Single End Adapter 2 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1095 0.26477031477442536 No Hit ACCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTCTGC 745 0.18014053379629855 Illumina Single End Adapter 2 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTCTGCT 698 0.16877596320780722 Illumina Single End Adapter 2 (95% over 22bp) CGCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTCTGC 557 0.13468225144233326 Illumina Single End Adapter 2 (95% over 21bp) GCCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTCTGC 553 0.1337150539454404 Illumina Single End Adapter 2 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCG 541 0.13081346145476175 No Hit AGCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTCTGC 488 0.11799809462093111 Illumina Single End Adapter 2 (95% over 21bp) GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCATA 482 0.1165472983755918 No Hit ACTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTCTGCT 461 0.11146951151690421 Illumina Single End Adapter 2 (95% over 22bp) CGTTCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTCT 435 0.10518272778710049 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.4548246229138759 0.0 2 0.0 0.0 0.0 1.72064434697243 0.0 3 0.0 0.0 0.0 2.741763104317086 0.0 4 0.0 0.0 0.0 3.3938960165971093 0.0 5 0.0 0.0 0.0 6.938433043335284 0.0 6 0.0 0.0 0.0 7.488768419067331 0.0 7 0.0 0.0 0.0 9.92804050623117 0.0 8 0.0 0.0 0.0 12.600165390771968 0.0 9 0.0 0.0 0.0 14.859296944139508 0.0 10 0.0 0.0 0.0 16.290265640792523 0.0 11 2.417993742232195E-4 0.0 0.0 17.576154712911602 0.0 12 2.417993742232195E-4 0.0 0.0 18.64998573383692 0.0 13 2.417993742232195E-4 0.0 0.0 19.089576996174735 0.0 14 2.417993742232195E-4 0.0 0.0 19.440427888172625 0.0 15 2.417993742232195E-4 0.0 0.0 20.65885493488343 0.0 16 2.417993742232195E-4 0.0 0.0 21.96578055255993 0.0 17 2.417993742232195E-4 0.0 0.0 23.586078159229725 0.0 18 2.417993742232195E-4 0.0 0.0 24.361286952989367 0.0 19 2.417993742232195E-4 0.0 0.0 25.392319484677174 0.0 20 2.417993742232195E-4 0.0 0.0 26.5599686628011 0.0 21 2.417993742232195E-4 0.0 0.0 27.576009633287068 0.0 22 2.417993742232195E-4 0.0 0.0 28.689253952210773 0.0 23 2.417993742232195E-4 0.0 0.0 29.481630501540263 0.0 24 2.417993742232195E-4 0.0 0.0 30.199049244860554 0.0 25 2.417993742232195E-4 0.0 0.0 30.919611380045747 0.0 26 2.417993742232195E-4 0.0 0.0 31.608255997833478 0.0 27 2.417993742232195E-4 0.0 0.0 32.30004400748611 0.0 28 2.417993742232195E-4 0.0 0.0 32.926062587350025 0.0 29 2.417993742232195E-4 0.0 0.0 33.723275124163976 0.0 30 2.417993742232195E-4 0.0 0.0 34.470435190513726 0.0 31 2.417993742232195E-4 0.0 0.0 35.11313792719904 0.0 32 2.417993742232195E-4 0.0 0.0 35.77929520318401 0.0 33 2.417993742232195E-4 0.0 0.0 36.4299773192187 0.0 34 2.417993742232195E-4 0.0 0.0 37.22259566792241 0.0 35 2.417993742232195E-4 0.0 0.0 37.85490103151613 0.0 36 2.417993742232195E-4 0.0 0.0 38.48237040762538 0.0 37 2.417993742232195E-4 0.0 0.0 39.07985666133096 0.0 38 2.417993742232195E-4 0.0 0.0 39.63672062016703 0.0 39 2.417993742232195E-4 0.0 0.0 40.287886334950166 0.0 40 2.417993742232195E-4 0.0 0.0 40.88875777989487 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGGGTG 70 0.0 46.000004 4 ACGATGG 35 1.0174517E-7 46.000004 1 ACTACGG 35 1.0174517E-7 46.000004 1 CGCAGTA 35 1.0174517E-7 46.000004 36 CTCACGA 30 1.8584924E-6 46.0 23 ACCGGAG 25 3.4133365E-5 46.0 41 TTAATCG 30 1.8584924E-6 46.0 19 ATCTACG 20 6.3067453E-4 46.0 11 CGAGTCT 20 6.3067453E-4 46.0 16 CATGCGG 80 0.0 46.0 1 CCCTACA 75 0.0 46.0 26 GCGCGAC 20 6.3067453E-4 46.0 8 GACGTCG 20 6.3067453E-4 46.0 18 CGTTGAT 30 1.8584924E-6 46.0 24 GATCCGG 20 6.3067453E-4 46.0 1 TCGGGCA 50 1.6370905E-11 46.0 4 CGATTCG 25 3.4133365E-5 46.0 9 TACGGGT 25 3.4133365E-5 46.0 3 GTTACGG 20 6.3067453E-4 46.0 1 CTAACGG 40 5.5970304E-9 46.0 1 >>END_MODULE