##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1544931_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 745810 Sequences flagged as poor quality 0 Sequence length 52 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.91475308724742 34.0 33.0 34.0 31.0 34.0 2 33.28434051568094 34.0 34.0 34.0 31.0 34.0 3 33.41611000120674 34.0 34.0 34.0 31.0 34.0 4 36.62871508829326 37.0 37.0 37.0 35.0 37.0 5 36.63243185261662 37.0 37.0 37.0 35.0 37.0 6 36.41712366420402 37.0 37.0 37.0 35.0 37.0 7 36.22516458615465 37.0 37.0 37.0 35.0 37.0 8 36.36154650648288 37.0 37.0 37.0 35.0 37.0 9 38.26042691838404 39.0 39.0 39.0 37.0 39.0 10 38.178847159464205 39.0 39.0 39.0 35.0 39.0 11 37.64756037060377 39.0 37.0 39.0 35.0 39.0 12 37.63123315589761 39.0 37.0 39.0 35.0 39.0 13 37.61824057065473 39.0 37.0 39.0 35.0 39.0 14 38.86117375739129 41.0 37.0 41.0 35.0 41.0 15 38.876603960794306 41.0 37.0 41.0 35.0 41.0 16 38.88875316769687 41.0 37.0 41.0 35.0 41.0 17 38.947619366862874 41.0 37.0 41.0 35.0 41.0 18 38.94748394363176 41.0 37.0 41.0 35.0 41.0 19 38.93246403239431 41.0 37.0 41.0 35.0 41.0 20 38.87731191590351 41.0 36.0 41.0 35.0 41.0 21 38.82913878869954 41.0 35.0 41.0 35.0 41.0 22 38.81310387364074 41.0 35.0 41.0 35.0 41.0 23 38.77266193802711 41.0 35.0 41.0 35.0 41.0 24 38.72631903567933 41.0 35.0 41.0 35.0 41.0 25 38.67435137635591 41.0 35.0 41.0 35.0 41.0 26 38.58202357168716 40.0 35.0 41.0 35.0 41.0 27 38.65527681312935 41.0 36.0 41.0 35.0 41.0 28 38.67962215577694 41.0 36.0 41.0 35.0 41.0 29 38.688969040372214 41.0 36.0 41.0 35.0 41.0 30 38.63791180059265 41.0 35.0 41.0 35.0 41.0 31 38.575133076788994 41.0 35.0 41.0 35.0 41.0 32 38.51591424089245 41.0 35.0 41.0 35.0 41.0 33 38.419378930290556 40.0 35.0 41.0 35.0 41.0 34 38.32043684048216 40.0 35.0 41.0 35.0 41.0 35 38.24569930679395 40.0 35.0 41.0 35.0 41.0 36 38.18620292031483 40.0 35.0 41.0 35.0 41.0 37 38.1558104611094 40.0 35.0 41.0 35.0 41.0 38 38.06030490339363 40.0 35.0 41.0 35.0 41.0 39 37.992514179214545 40.0 35.0 41.0 35.0 41.0 40 37.92349660101098 40.0 35.0 41.0 35.0 41.0 41 37.88736407395986 40.0 35.0 41.0 35.0 41.0 42 37.83434654938925 40.0 35.0 41.0 35.0 41.0 43 37.773774822005606 40.0 35.0 41.0 35.0 41.0 44 37.656657861921936 40.0 35.0 41.0 35.0 41.0 45 37.649778093616334 40.0 35.0 41.0 35.0 41.0 46 37.57563320416728 39.0 35.0 41.0 35.0 41.0 47 37.47587455249997 39.0 35.0 41.0 35.0 41.0 48 37.400332524369475 39.0 35.0 41.0 35.0 41.0 49 37.35446293291857 39.0 35.0 41.0 35.0 41.0 50 37.28733859830252 39.0 35.0 41.0 35.0 41.0 51 37.21014199326906 39.0 35.0 41.0 34.0 41.0 52 36.74898164411847 38.0 35.0 40.0 34.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 3.0 13 7.0 14 15.0 15 12.0 16 21.0 17 35.0 18 79.0 19 107.0 20 173.0 21 286.0 22 427.0 23 712.0 24 1071.0 25 1847.0 26 2778.0 27 3208.0 28 3229.0 29 3409.0 30 4047.0 31 4773.0 32 6500.0 33 9298.0 34 35340.0 35 128050.0 36 28441.0 37 45299.0 38 80865.0 39 383638.0 40 2139.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.0399029243373 21.846046580228208 22.582695324546467 21.531355170888027 2 28.3014440675239 24.37685201324734 25.32830077365549 21.99340314557327 3 29.174052372588193 24.45435164452072 23.865059465547525 22.50653651734356 4 26.80133009747791 26.291414703476757 22.070098282404366 24.837156916640968 5 24.37792467250372 35.425778683578926 20.63796409273139 19.55833255118596 6 85.69447982730186 3.373379278904815 7.620037274909159 3.3121036188841666 7 85.76152103082555 3.2725493088051913 6.0113165551547985 4.954613105214465 8 74.03789168823158 6.357115082929969 11.737037583298696 7.867955645539748 9 48.661187165632 19.361097330419273 16.32091283302718 15.656802670921548 10 38.814845604108285 21.21800458561832 24.381544897494003 15.585604912779393 11 37.42870168005256 17.941030557380564 24.870543435995764 19.75972432657111 12 23.831941111006824 26.61616229334549 28.424799882007484 21.127096713640203 13 17.342218527507004 29.690671886941715 30.574006784569796 22.39310280098148 14 17.321838001635808 22.960137300384815 38.702618629409635 21.015406068569742 15 20.461377562650004 18.640270310132607 39.925718346495756 20.97263378072163 16 20.306244217696197 22.00614097424277 27.853742910392725 29.833871897668306 17 21.611000120674166 23.298695378179428 30.931872728979233 24.158431772167173 18 24.387042276182942 27.230930129657686 26.859924109357614 21.522103484801757 19 27.692039527493595 23.364529840039687 25.109612367761226 23.83381826470549 20 23.065257907509956 29.25879245384213 26.133733792789048 21.542215845858863 21 21.506281760770168 24.079859481637413 26.307504592322438 28.106354165269977 22 21.35879111301806 27.393438006999098 25.01508427079283 26.232686609190008 23 22.178839114519782 21.333985867714297 33.94363175607729 22.543543261688633 24 22.129764953540445 21.886941714377656 30.243895898419172 25.73939743366273 25 19.48619621619447 26.8196993872434 28.657835105455813 25.036269291106315 26 19.203952749359757 26.05770906799319 28.781593167160537 25.956745015486515 27 20.940856250251404 25.756425899357744 32.32686609190008 20.97585175849077 28 20.569984312358375 25.32964159772596 28.59025757230394 25.510116517611724 29 22.816266877622986 25.220900765610544 28.581542215845857 23.381290140920612 30 26.781754066048997 23.60721899679543 24.795055040828093 24.815971896327483 31 27.909655274131477 25.58238693501026 24.52501307303469 21.982944717823575 32 27.176224507582358 24.28420106997761 26.472694117804803 22.066880304635227 33 20.294713130690123 24.1876617369035 29.560880116919858 25.956745015486515 34 24.13000630187313 23.497405505423632 29.783993242246687 22.58859495045655 35 28.249554175996565 24.804172644507315 24.766897735348145 22.179375444147972 36 25.512395918531528 26.328555530228883 26.17047237232003 21.988576178919566 37 25.307786165377237 26.678108365401375 25.54149180086081 22.472613668360573 38 24.760461779809873 25.200922486960486 25.04297341145868 24.995642321770962 39 28.040385621002667 20.785991070111688 28.134377388342873 23.03924592054277 40 20.032313860098416 20.11986967190035 31.617838323433585 28.229978144567653 41 21.90651774580657 24.384494710449044 26.103297086389293 27.60569045735509 42 22.22107507273971 21.627894503962136 28.85949504565506 27.2915353776431 43 23.378340327965567 25.053700004022474 27.912605087086522 23.655354580925437 44 21.61542484010673 25.359005644869338 27.776913691154583 25.24865582386935 45 22.657781472492992 25.133479036215654 26.692991512583635 25.515747978707715 46 24.264356873734595 21.642643568737345 28.639599898097373 25.453399659430687 47 22.916292353280326 19.596948284415603 32.200158217240315 25.28660114506376 48 22.086456336064145 19.61022244271329 29.41124415065499 28.892077070567574 49 21.432134189672972 22.730320054705622 30.81012590338022 25.027419852241188 50 21.0226465185503 23.32269612904091 29.22004263820544 26.43461471420335 51 21.89646156527802 20.132339335755756 30.12442847373996 27.846770625226263 52 23.111114090720157 19.218165484506777 32.85635751733015 24.814362907442913 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 95.0 1 309.5 2 524.0 3 1934.0 4 3344.0 5 2219.5 6 1095.0 7 1087.0 8 1079.0 9 1088.0 10 1097.0 11 1068.5 12 1040.0 13 1037.0 14 972.5 15 911.0 16 876.5 17 842.0 18 887.5 19 933.0 20 933.0 21 933.0 22 1061.5 23 1190.0 24 1608.0 25 2026.0 26 2606.0 27 3186.0 28 4147.5 29 5109.0 30 6030.0 31 6951.0 32 7411.0 33 7871.0 34 9127.0 35 10383.0 36 11235.5 37 12088.0 38 13717.0 39 17956.5 40 20567.0 41 25883.0 42 31199.0 43 38637.5 44 46076.0 45 53298.0 46 60520.0 47 67538.0 48 74556.0 49 77449.5 50 80343.0 51 74179.0 52 68015.0 53 61074.5 54 54134.0 55 49076.0 56 44018.0 57 40559.0 58 37100.0 59 36326.0 60 35552.0 61 34798.5 62 34045.0 63 31625.5 64 23549.5 65 17893.0 66 14992.0 67 12091.0 68 10022.5 69 7954.0 70 6819.5 71 5685.0 72 4881.0 73 4077.0 74 3184.5 75 2292.0 76 1982.0 77 1672.0 78 1298.5 79 925.0 80 652.5 81 380.0 82 278.0 83 176.0 84 190.5 85 205.0 86 120.5 87 36.0 88 22.5 89 5.5 90 2.0 91 1.5 92 1.0 93 1.5 94 2.0 95 2.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 745810.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.42582798639368 #Duplication Level Percentage of deduplicated Percentage of total 1 71.2279803472804 19.534863368227416 2 10.72033068661969 5.880278907369785 3 3.5910463754586486 2.954622605534741 4 1.7889513974533395 1.962538932102955 5 1.1065463485356963 1.5173974906956016 6 0.7691802973596552 1.2657243915545426 7 0.6594712727804629 1.2660581982471557 8 0.5746531676992404 1.2608271143324485 9 0.5446045163237793 1.3442606806778188 >10 8.676547448710055 51.75769066105407 >50 0.25821608440384275 4.657151994692503 >100 0.07216305020328558 3.6201948479124098 >500 0.007363576551355671 1.3250755957140072 >1k 0.0029454306205422684 1.6533152118845769 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTCTGCT 2910 0.39017980450785056 Illumina Single End Adapter 1 (95% over 21bp) CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA 2252 0.3019535806706802 No Hit GCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTCTGCT 2095 0.28090264276424287 Illumina Single End Adapter 1 (95% over 21bp) CTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTCTGCTT 2069 0.27741650018101127 Illumina Single End Adapter 1 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1607 0.2154704281251257 No Hit TGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTCTGCTTG 1347 0.18060900229280918 Illumina Single End Adapter 1 (95% over 23bp) GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 986 0.1322052533487081 No Hit GACCCACCAAACTCATGCATATCACATAGTTAATCCAAGTCCATGACCATTA 774 0.1037797830546654 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2851932797897588 0.0 2 0.0 0.0 0.0 1.133532669178477 0.0 3 0.0 0.0 0.0 1.770155937839396 0.0 4 0.0 0.0 0.0 2.1836660811734894 0.0 5 0.0 0.0 0.0 4.502353146243681 0.0 6 0.0 0.0 0.0 4.948847561711428 0.0 7 0.0 0.0 0.0 6.874002762097585 0.0 8 0.0 0.0 0.0 8.897842614070608 0.0 9 0.0 0.0 0.0 10.790281707137206 0.0 10 0.0 0.0 0.0 11.782491519287754 0.0 11 0.0 0.0 0.0 12.707526045507569 0.0 12 0.0 0.0 0.0 13.513227229455223 0.0 13 0.0 0.0 0.0 13.869618267387136 0.0 14 0.0 0.0 0.0 14.12598382966171 0.0 15 0.0 0.0 0.0 14.981161421809844 0.0 16 0.0 0.0 0.0 15.819310548262962 0.0 17 0.0 0.0 0.0 16.849063434386775 0.0 18 0.0 0.0 0.0 17.407114412517934 0.0 19 0.0 0.0 0.0 18.03770397286172 0.0 20 0.0 0.0 0.0 18.767782679234656 0.0 21 0.0 0.0 0.0 19.44650782370845 0.0 22 0.0 0.0 0.0 20.121612743191967 0.0 23 0.0 0.0 0.0 20.646143119561284 0.0 24 0.0 0.0 0.0 21.12374465346402 0.0 25 0.0 0.0 0.0 21.5839154744506 0.0 26 0.0 0.0 0.0 22.023571687158928 0.0 27 1.340824070473713E-4 0.0 0.0 22.447272093428623 0.0 28 1.340824070473713E-4 0.0 0.0 22.881565009855056 0.0 29 1.340824070473713E-4 0.0 0.0 23.41588340193883 0.0 30 1.340824070473713E-4 0.0 0.0 23.914938120969147 0.0 31 1.340824070473713E-4 0.0 0.0 24.382349391936284 0.0 32 1.340824070473713E-4 0.0 0.0 24.86048725546721 0.0 33 1.340824070473713E-4 0.0 0.0 25.293573430230218 0.0 34 1.340824070473713E-4 0.0 0.0 25.820651372333437 0.0 35 1.340824070473713E-4 0.0 0.0 26.25802818412196 0.0 36 1.340824070473713E-4 0.0 0.0 26.70854507180113 0.0 37 1.340824070473713E-4 0.0 0.0 27.18587844088977 0.0 38 1.340824070473713E-4 0.0 0.0 27.680910687708664 0.0 39 1.340824070473713E-4 0.0 0.0 28.21053619554578 0.0 40 1.340824070473713E-4 0.0 0.0 28.731312264517772 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCGG 20 6.310023E-4 46.0 1 TACCAGG 60 0.0 46.0 1 CGCATGT 20 6.310023E-4 46.0 39 ATTACGG 30 1.8605188E-6 46.0 1 TCGATCA 45 3.092282E-10 46.0 16 AATGCGG 80 0.0 46.0 1 CCGTAGG 50 1.6370905E-11 46.0 1 ACTACGG 45 3.092282E-10 46.0 1 AACTCCG 20 6.310023E-4 46.0 13 ATTGCGG 130 0.0 46.0 1 CATGCGG 140 0.0 44.35714 1 TTGCGGG 425 0.0 43.835297 2 ATAGCGG 80 0.0 43.125 1 GCATAGG 160 0.0 43.125 1 CTTGCGG 220 0.0 42.863636 1 CGTTTTT 1000 0.0 42.55 1 TACACGG 60 1.8189894E-12 42.166668 1 CCTCGAT 55 4.7293724E-11 41.81818 14 CCATAGG 55 4.7293724E-11 41.81818 1 GCCTACG 55 4.7293724E-11 41.81818 25 >>END_MODULE