##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1544826_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 445449 Sequences flagged as poor quality 0 Sequence length 52 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.89656054901908 34.0 33.0 34.0 31.0 34.0 2 33.18816295468168 34.0 33.0 34.0 31.0 34.0 3 33.22051458191623 34.0 33.0 34.0 31.0 34.0 4 36.525094904242685 37.0 37.0 37.0 35.0 37.0 5 36.51693235364767 37.0 37.0 37.0 35.0 37.0 6 36.65132259809765 37.0 37.0 37.0 35.0 37.0 7 36.618263819202646 37.0 37.0 37.0 35.0 37.0 8 36.52514429261262 37.0 37.0 37.0 35.0 37.0 9 38.31251164555314 39.0 39.0 39.0 37.0 39.0 10 38.083984923077615 39.0 39.0 39.0 35.0 39.0 11 37.17704159174227 39.0 35.0 39.0 35.0 39.0 12 37.00641150838817 39.0 35.0 39.0 35.0 39.0 13 36.97722522668139 39.0 35.0 39.0 35.0 39.0 14 38.198217977815645 40.0 35.0 41.0 35.0 41.0 15 38.28465211505694 40.0 35.0 41.0 35.0 41.0 16 38.304569097696934 40.0 35.0 41.0 35.0 41.0 17 38.39772005324964 40.0 36.0 41.0 35.0 41.0 18 38.37701734654248 40.0 36.0 41.0 35.0 41.0 19 38.27579363743099 40.0 35.0 41.0 35.0 41.0 20 38.16998803454492 40.0 35.0 41.0 35.0 41.0 21 38.12233948218539 40.0 35.0 41.0 35.0 41.0 22 38.12108456860381 40.0 35.0 41.0 35.0 41.0 23 38.08046487925666 40.0 35.0 41.0 35.0 41.0 24 38.033123881746285 40.0 35.0 41.0 35.0 41.0 25 38.01873839653922 40.0 35.0 41.0 35.0 41.0 26 37.9686024662756 40.0 35.0 41.0 35.0 41.0 27 37.97625990854172 40.0 35.0 41.0 35.0 41.0 28 37.99678526610229 40.0 35.0 41.0 35.0 41.0 29 38.00933889176988 40.0 35.0 41.0 35.0 41.0 30 37.91958450911328 40.0 35.0 41.0 35.0 41.0 31 37.85577249022896 40.0 35.0 41.0 35.0 41.0 32 37.782141165430836 40.0 35.0 41.0 35.0 41.0 33 37.69651520151577 40.0 35.0 41.0 35.0 41.0 34 37.622722242052404 40.0 35.0 41.0 35.0 41.0 35 37.568734018933704 40.0 35.0 41.0 35.0 41.0 36 37.493221446226165 40.0 35.0 41.0 34.0 41.0 37 37.418923378433895 39.0 35.0 41.0 34.0 41.0 38 37.395291043419114 39.0 35.0 41.0 35.0 41.0 39 37.26770516939089 39.0 35.0 41.0 34.0 41.0 40 37.19494936569618 39.0 35.0 41.0 34.0 41.0 41 37.215607173885225 39.0 35.0 41.0 34.0 41.0 42 37.127924857840064 39.0 35.0 41.0 34.0 41.0 43 37.131180000404086 39.0 35.0 41.0 34.0 41.0 44 37.102842300689865 39.0 35.0 41.0 34.0 41.0 45 37.09560690449412 39.0 35.0 41.0 34.0 41.0 46 37.080063037519444 38.0 35.0 41.0 34.0 41.0 47 36.995590965520186 38.0 35.0 41.0 34.0 41.0 48 37.03407573033052 38.0 35.0 41.0 34.0 41.0 49 36.972189857873744 38.0 35.0 41.0 34.0 41.0 50 36.88449182734724 38.0 35.0 41.0 34.0 41.0 51 36.81786018152471 38.0 35.0 41.0 34.0 41.0 52 36.57208344838578 37.0 35.0 40.0 34.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 0.0 13 0.0 14 2.0 15 2.0 16 1.0 17 12.0 18 34.0 19 63.0 20 119.0 21 193.0 22 322.0 23 521.0 24 892.0 25 1627.0 26 2259.0 27 2494.0 28 2494.0 29 2810.0 30 3316.0 31 4179.0 32 5477.0 33 8355.0 34 25073.0 35 111694.0 36 14659.0 37 20377.0 38 36499.0 39 200180.0 40 1794.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.19100054102714 22.524239587472415 24.232179216924944 22.052580654575497 2 25.729544796373993 24.067401655408364 27.769508967356533 22.43354458086111 3 25.62695168245972 25.14317014966921 27.28662540492851 21.94325276294256 4 25.458806732083804 27.056520499540916 24.5300808846804 22.954591883694878 5 23.44308776088845 35.10502885852252 21.832577915765892 19.619305464823135 6 85.26722475524696 2.7527281462075344 8.745782345453689 3.234264753091824 7 86.25117577994338 2.451459089592748 5.960951758787202 5.3364133716766675 8 75.56128759970278 4.7307323621783866 12.412644320674197 7.295335717444646 9 51.38859891929267 18.09073541527762 15.15886218175369 15.36180348367602 10 46.44123120716401 18.843683564223962 24.45173297055331 10.263352258058722 11 43.87977074816646 16.24046748337071 23.369903176345666 16.509858592117165 12 19.712469889931285 37.738102453928505 26.76872099836345 15.780706657776761 13 11.388060137075176 41.45839366571706 29.261935709811898 17.891610487395866 14 11.481224562183325 23.58743649665843 48.64956482111308 16.281774120045167 15 12.21441736315493 17.01810981728548 51.196433261720195 19.57103955783939 16 12.433522131602047 20.80148344703883 28.277535699934226 38.4874587214249 17 18.20096127727304 23.2154522739977 34.15318027428505 24.430406174444215 18 23.889154538454456 28.01532835408767 28.060900349983946 20.03461675747392 19 28.265413100040632 22.288297874728645 25.09692467600107 24.349364349229656 20 17.925284375989172 31.516065812247867 28.21243284865383 22.346216963109132 21 18.02383662327225 24.653776302113148 26.569371577891072 30.753015496723528 22 16.34799943427867 30.773219829879515 23.677009040316623 29.201771695525192 23 17.723914522201195 21.72078060563611 39.0902213272451 21.465083544917597 24 17.037416180078978 22.460483691735757 35.50148277356106 25.00061735462421 25 13.440820385723168 32.77838764931563 30.035088191914227 23.74570377304697 26 15.344293061607504 30.398766188721943 30.11006871718199 24.146872032488567 27 16.98039506206098 26.25261253252336 40.015355293198546 16.75163711221711 28 13.959398270060097 24.636939357816495 35.3409705712663 26.062691800857113 29 16.646574579805993 26.116570022606407 32.70228466109476 24.534570736492842 30 26.099957570900372 24.16595390269144 25.17145621608759 24.5626323103206 31 27.26889049026937 24.36418086021071 27.10231698802781 21.264611661492115 32 22.064703254469087 27.193685472410984 26.615392558968594 24.12621871415134 33 15.05133023084573 24.80328836746743 33.1324124647266 27.012968936960235 34 18.462495145347727 22.582383168443528 33.204923571497524 25.750198114711225 35 23.494272071550277 23.915195678966615 28.547824779043168 24.04270747043994 36 20.264497170270896 28.07616584614625 27.825183129830798 23.834153853752056 37 20.108699312379194 28.59743764157064 27.12229682859317 24.171566217456995 38 18.95211348549441 30.04743528439844 25.485296857777207 25.51515437232994 39 24.670388753819182 25.775341284860893 25.756259414658018 23.798010546661907 40 14.270320508071633 21.543206966454072 33.351517233173716 30.834955292300574 41 21.08681352971945 24.56173433995811 26.621004873734144 27.7304472565883 42 20.75209507710198 22.425462847598716 30.19739633493397 26.625045740365337 43 20.936852479183923 26.67420961771157 29.68600221349694 22.702935689607564 44 15.910912360337548 30.305601763613794 26.35206275016893 27.43142312587973 45 20.437805450231114 27.322095234246795 27.134643921077384 25.10545539444471 46 23.874338027473403 22.701813226654455 28.625948200579636 24.797900545292503 47 20.660277607537562 20.165495937806575 33.84787035103906 25.3263561036168 48 18.403004608832884 19.089951936136348 29.700145246706132 32.80689820832464 49 18.876459482454784 23.918563067825946 32.604405891583546 24.600571558135723 50 18.36080000179594 25.523236105592336 28.50988553122804 27.606078361383684 51 19.25248457174671 20.21488430774342 31.73651753623872 28.79611358427115 52 20.27392585907702 18.838071249458412 35.92420232170237 24.963800569762196 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 107.0 1 143.0 2 179.0 3 769.5 4 1360.0 5 957.0 6 554.0 7 648.5 8 743.0 9 772.0 10 801.0 11 774.5 12 748.0 13 738.0 14 634.5 15 541.0 16 554.0 17 567.0 18 601.0 19 635.0 20 686.0 21 737.0 22 748.5 23 760.0 24 861.5 25 963.0 26 1276.0 27 1589.0 28 2079.0 29 2569.0 30 2950.0 31 3331.0 32 3624.0 33 3917.0 34 4656.5 35 5396.0 36 6097.5 37 6799.0 38 7907.0 39 11401.5 40 13788.0 41 21549.5 42 29311.0 43 41730.0 44 54149.0 45 64110.0 46 74071.0 47 70862.0 48 67653.0 49 56475.0 50 45297.0 51 38040.0 52 30783.0 53 26521.5 54 22260.0 55 18531.0 56 14802.0 57 13238.0 58 11674.0 59 11636.0 60 11598.0 61 10923.0 62 10248.0 63 9152.5 64 6116.5 65 4176.0 66 3295.0 67 2414.0 68 1757.5 69 1101.0 70 937.5 71 774.0 72 632.5 73 491.0 74 417.5 75 344.0 76 289.5 77 235.0 78 163.0 79 91.0 80 79.0 81 67.0 82 41.5 83 16.0 84 12.5 85 9.0 86 4.5 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 445449.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.12420730314859 #Duplication Level Percentage of deduplicated Percentage of total 1 68.86065083293819 19.36651219055285 2 12.609660784051325 7.092734278260853 3 4.779115941255274 4.0322654237293625 4 2.2876104626340306 2.573489235198845 5 1.3596871751801547 1.9120061991099588 6 0.7996737167145468 1.349411363025554 7 0.6356972849003169 1.2514937555809655 8 0.48711103752547824 1.0959689439214673 9 0.41603035551628154 1.0530471566648258 >10 7.290444424321503 46.10097527802316 >50 0.37210804880930304 6.899200814832376 >100 0.09342626976542587 4.367105857401465 >500 0.006388121009601768 1.233147087472562 >1k 0.002395545378600663 1.672642416225759 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGCT 2906 0.6523754683476671 No Hit CTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGCTT 2598 0.5832317504360769 Illumina Single End Adapter 1 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGCT 1944 0.4364135961692584 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 801 0.17981856508825927 No Hit ACCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC 787 0.17667566881955063 No Hit TCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGCT 760 0.17061436887275536 No Hit CGCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC 702 0.15759379861667666 No Hit GCCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC 677 0.1519814838511255 No Hit ACTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGCT 603 0.13536903214509405 No Hit AGCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC 583 0.13087918033265314 No Hit CGTTCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCT 578 0.1297567173795429 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCATA 482 0.10820542867982642 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCG 460 0.1032665916861414 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5933339170140689 0.0 2 0.0 0.0 0.0 2.0139230304703792 0.0 3 0.0 0.0 0.0 3.161529153730281 0.0 4 0.0 0.0 0.0 3.9306407692014127 0.0 5 0.0 0.0 0.0 7.5315019227790385 0.0 6 2.2449259062204651E-4 0.0 0.0 8.131121632330524 0.0 7 2.2449259062204651E-4 0.0 0.0 10.775868842448855 0.0 8 2.2449259062204651E-4 0.0 0.0 13.84468255625223 0.0 9 2.2449259062204651E-4 0.0 0.0 16.59988012095661 0.0 10 2.2449259062204651E-4 0.0 0.0 17.993979108719518 0.0 11 2.2449259062204651E-4 0.0 0.0 19.360690000426537 0.0 12 2.2449259062204651E-4 0.0 0.0 20.66746137043747 0.0 13 2.2449259062204651E-4 0.0 0.0 21.09332381484749 0.0 14 2.2449259062204651E-4 0.0 0.0 21.42983820818994 0.0 15 2.2449259062204651E-4 0.0 0.0 22.684302804585936 0.0 16 2.2449259062204651E-4 0.0 0.0 23.964359556312843 0.0 17 2.2449259062204651E-4 0.0 0.0 26.276633239719924 0.0 18 2.2449259062204651E-4 0.0 0.0 27.0421529737411 0.0 19 2.2449259062204651E-4 0.0 0.0 28.053716587084043 0.0 20 2.2449259062204651E-4 0.0 0.0 29.087280474307946 0.0 21 4.4898518124409303E-4 0.0 0.0 29.897698726453534 0.0 22 4.4898518124409303E-4 0.0 0.0 30.910160310158965 0.0 23 4.4898518124409303E-4 0.0 0.0 31.543229415713135 0.0 24 4.4898518124409303E-4 0.0 0.0 32.053501074197044 0.0 25 4.4898518124409303E-4 0.0 0.0 32.60463038417417 0.0 26 4.4898518124409303E-4 0.0 0.0 33.05877889500257 0.0 27 4.4898518124409303E-4 0.0 0.0 33.56725461276151 0.0 28 4.4898518124409303E-4 0.0 0.0 34.02791340871794 0.0 29 4.4898518124409303E-4 0.0 0.0 34.77637170585185 0.0 30 4.4898518124409303E-4 0.0 0.0 35.46511497388029 0.0 31 4.4898518124409303E-4 0.0 0.0 36.02140761344172 0.0 32 4.4898518124409303E-4 0.0 0.0 36.537740571872426 0.0 33 4.4898518124409303E-4 0.0 0.0 37.02937934533471 0.0 34 4.4898518124409303E-4 0.0 0.0 37.79624603489962 0.0 35 4.4898518124409303E-4 0.0 0.0 38.30247682675233 0.0 36 4.4898518124409303E-4 0.0 0.0 38.84170802942649 0.0 37 4.4898518124409303E-4 0.0 0.0 39.35489809158849 0.0 38 4.4898518124409303E-4 0.0 0.0 39.820046739357366 0.0 39 4.4898518124409303E-4 0.0 0.0 40.3783598122344 0.0 40 4.4898518124409303E-4 0.0 0.0 40.96989778852349 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTGTTAT 35 1.0176882E-7 46.000004 22 ATAAGCG 35 1.0176882E-7 46.000004 32 GCTACGA 70 0.0 46.000004 10 GACGAGG 35 1.0176882E-7 46.000004 1 AGTACGG 35 1.0176882E-7 46.000004 1 AAACTAG 30 1.858818E-6 46.0 9 TCGTTGA 25 3.413762E-5 46.0 23 AATCCCC 50 1.6370905E-11 46.0 36 GTACCCT 20 6.307271E-4 46.0 17 CTCAATC 25 3.413762E-5 46.0 26 GTACACG 20 6.307271E-4 46.0 24 TTAGCGG 60 0.0 46.0 1 CCCTACA 85 0.0 46.0 26 AGCCCGA 25 3.413762E-5 46.0 14 CTTTTCG 20 6.307271E-4 46.0 31 GACGTTG 20 6.307271E-4 46.0 38 GGCGTAC 20 6.307271E-4 46.0 7 ACTTAGC 20 6.307271E-4 46.0 15 GCGTTGG 45 3.092282E-10 46.0 1 ACGGGTG 40 5.5988494E-9 46.0 4 >>END_MODULE