##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1544758_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 665182 Sequences flagged as poor quality 0 Sequence length 52 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.918014919225115 34.0 33.0 34.0 31.0 34.0 2 33.23034748384653 34.0 33.0 34.0 31.0 34.0 3 33.2749217507389 34.0 34.0 34.0 31.0 34.0 4 36.562412993737055 37.0 37.0 37.0 35.0 37.0 5 36.56308499027334 37.0 37.0 37.0 35.0 37.0 6 36.67469805256306 37.0 37.0 37.0 35.0 37.0 7 36.64578566467523 37.0 37.0 37.0 35.0 37.0 8 36.54649855227592 37.0 37.0 37.0 35.0 37.0 9 38.33928759347066 39.0 39.0 39.0 37.0 39.0 10 38.11394024492545 39.0 39.0 39.0 35.0 39.0 11 37.425187392322705 39.0 35.0 39.0 35.0 39.0 12 37.329975856231826 39.0 35.0 39.0 35.0 39.0 13 37.30804050620733 39.0 35.0 39.0 35.0 39.0 14 38.59112543634674 41.0 35.0 41.0 35.0 41.0 15 38.66004642338488 41.0 35.0 41.0 35.0 41.0 16 38.65168630540213 41.0 35.0 41.0 35.0 41.0 17 38.72411460322137 41.0 36.0 41.0 35.0 41.0 18 38.70533177386039 41.0 36.0 41.0 35.0 41.0 19 38.62729448481769 41.0 35.0 41.0 35.0 41.0 20 38.536916212405025 40.0 35.0 41.0 35.0 41.0 21 38.48075714616451 40.0 35.0 41.0 35.0 41.0 22 38.469110709550165 40.0 35.0 41.0 35.0 41.0 23 38.43653315934586 40.0 35.0 41.0 35.0 41.0 24 38.37956829860099 40.0 35.0 41.0 35.0 41.0 25 38.350627347102 40.0 35.0 41.0 35.0 41.0 26 38.318173071430074 40.0 35.0 41.0 35.0 41.0 27 38.3212263711285 40.0 35.0 41.0 35.0 41.0 28 38.33867573085261 40.0 35.0 41.0 35.0 41.0 29 38.3260806816781 40.0 36.0 41.0 35.0 41.0 30 38.25293378353594 40.0 35.0 41.0 35.0 41.0 31 38.19795785213671 40.0 35.0 41.0 35.0 41.0 32 38.09766048991103 40.0 35.0 41.0 35.0 41.0 33 38.03269781804077 40.0 35.0 41.0 35.0 41.0 34 37.9198084133365 40.0 35.0 41.0 35.0 41.0 35 37.84495220856848 40.0 35.0 41.0 35.0 41.0 36 37.803990486814136 40.0 35.0 41.0 35.0 41.0 37 37.71658282996233 40.0 35.0 41.0 35.0 41.0 38 37.693853712217106 40.0 35.0 41.0 35.0 41.0 39 37.59088339732585 40.0 35.0 41.0 35.0 41.0 40 37.52652958137773 40.0 35.0 41.0 34.0 41.0 41 37.48719598545962 39.0 35.0 41.0 34.0 41.0 42 37.408174003505806 39.0 35.0 41.0 34.0 41.0 43 37.41672053663508 39.0 35.0 41.0 34.0 41.0 44 37.3914131771455 39.0 35.0 41.0 34.0 41.0 45 37.38761872690482 39.0 35.0 41.0 35.0 41.0 46 37.36136726489893 39.0 35.0 41.0 35.0 41.0 47 37.27992639608408 39.0 35.0 41.0 35.0 41.0 48 37.26745762813786 39.0 35.0 41.0 34.0 41.0 49 37.207508621700526 39.0 35.0 41.0 34.0 41.0 50 37.14626072262929 39.0 35.0 41.0 34.0 41.0 51 37.081513029516735 38.0 35.0 41.0 34.0 41.0 52 36.83912523189142 38.0 35.0 41.0 34.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 2.0 14 3.0 15 11.0 16 8.0 17 14.0 18 48.0 19 68.0 20 144.0 21 231.0 22 407.0 23 690.0 24 1221.0 25 2140.0 26 2785.0 27 3361.0 28 3424.0 29 3778.0 30 4464.0 31 5477.0 32 7396.0 33 10820.0 34 32022.0 35 139946.0 36 23762.0 37 35314.0 38 63532.0 39 320888.0 40 3225.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.57213815166375 22.293146838008244 25.041417236184984 20.093297774143014 2 27.232546881906007 24.168573412990728 26.741854109100966 21.8570255960023 3 27.140992991391826 24.030415735843725 26.322269694609897 22.50632157815455 4 25.63599135274256 27.206538962268972 24.233217375094334 22.924252309894133 5 24.302070711474457 35.08378158158219 20.791903569248717 19.822244137694646 6 86.33847578557447 2.927770144110935 7.885661367866239 2.8480927024483527 7 87.45050226855207 2.5726793569278783 5.4781999512915265 4.49861842322853 8 77.31688470223187 5.144306370286628 10.851315880465798 6.687493047015704 9 49.25854878815122 22.463025157024692 14.103508513459474 14.174917541364618 10 41.44745347889751 19.88072437317907 25.89997925379821 12.771842894125218 11 39.26669693407218 18.290783575021575 24.386709201391497 18.05581028951475 12 20.87082933693335 34.29332122637113 27.09844824423992 17.7374011924556 13 14.422518949700985 36.61418980068613 29.355274195633672 19.608017053979214 14 13.274261780986258 24.95572640269881 43.34407726005815 18.425934556256784 15 15.580096875742278 18.89858715359105 45.2214581873833 20.29985778328337 16 15.162015809207105 22.788800659067743 27.83298405549158 34.21619947623357 17 19.33125069529843 24.02079430892598 32.25838943326789 24.389565562507702 18 22.81315489595329 28.48904510344537 27.613645588726094 21.084154411875247 19 27.011855401980213 23.338124002152792 25.895769879521698 23.7542507163453 20 19.516312828669445 30.00832854767567 27.591546373774396 22.883812249880485 21 19.531797312615193 24.755330120177636 27.111828041047414 28.601044526159757 22 18.440366696633404 29.161642978914042 24.03417410573347 28.36381621871909 23 19.26314903289626 22.40379324756232 37.004458930037195 21.328598789504227 24 18.99089271808317 22.775871866647023 33.780228569023215 24.45300684624659 25 15.10203222576678 31.838354014390045 29.241470755372212 23.818143004470958 26 15.969463996319805 29.028145680430317 30.26946008761512 24.732930235634758 27 18.619716107772007 26.451256949225925 36.66921233587199 18.259814607130078 28 16.33041784053086 24.545011741147533 33.034267313306735 26.09030310501487 29 18.500801284460493 26.771019059445383 31.914122751367298 22.814056904726826 30 25.643508092522048 25.49332363172786 26.133298856553544 22.72986941919655 31 28.009627440309572 26.04204563563055 24.774723308808717 21.173603615251164 32 22.03171462847762 26.987801834685843 29.58182873258747 21.398654804249063 33 18.588145800698154 27.540883547660638 29.454344825927343 24.416625825713865 34 19.292464318036266 23.70794759930365 31.517088556214688 25.482499526445395 35 25.62757260418953 26.418032959400584 27.78352390774254 20.170870528667344 36 22.374026958035547 27.716173919318322 28.793172394923495 21.116626727722636 37 19.605311027658594 29.42968991945062 27.89822935677754 23.066769696113244 38 20.34135018686615 28.93403609839112 25.889155148515748 24.835458566226986 39 25.71687147276986 24.89469047568936 27.055001488314478 22.333436563226307 40 17.385016431593158 21.43969620344507 32.92843161721153 28.24685574775024 41 21.979849123999145 24.56139823386682 25.655835545760407 27.802917096373626 42 22.17363067551437 22.45340373010695 29.287773872413865 26.08519172196482 43 23.359471543126542 26.518306268058968 27.97595244609746 22.14626974271703 44 17.04450811958231 29.81349465259132 27.47413489841878 25.667862329407594 45 20.738384382018758 27.742933512933305 27.10070326617377 24.41797883887417 46 22.780381910514716 23.562423517172743 28.57849430682129 25.07870026549125 47 21.275981611047804 21.280491654915494 33.58855170464625 23.854975029390452 48 20.758228575036604 19.958597797294576 29.94924697300889 29.333926654659926 49 19.976487637969758 24.126930674612364 32.23328352240439 23.663298165013487 50 18.75997847205727 26.118415711790156 29.071592436355765 26.050013379796805 51 20.214768288979556 21.2583924399638 30.562161934628417 27.964677336428224 52 21.33355983775869 19.993926474258174 33.68326262586781 24.98925106211533 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 146.0 1 245.0 2 344.0 3 1402.5 4 2461.0 5 1667.5 6 874.0 7 933.0 8 992.0 9 1049.5 10 1107.0 11 1067.5 12 1028.0 13 1070.0 14 1044.0 15 976.0 16 900.0 17 824.0 18 813.0 19 802.0 20 978.5 21 1155.0 22 1329.0 23 1503.0 24 1611.5 25 1720.0 26 2243.0 27 2766.0 28 4091.5 29 5417.0 30 5995.5 31 6574.0 32 7730.0 33 8886.0 34 10832.0 35 12778.0 36 13210.0 37 13642.0 38 15663.0 39 19940.0 40 22196.0 41 31157.5 42 40119.0 43 54413.5 44 68708.0 45 80108.0 46 91508.0 47 90342.0 48 89176.0 49 76724.0 50 64272.0 51 54520.0 52 44768.0 53 39379.0 54 33990.0 55 29761.5 56 25533.0 57 23848.0 58 22163.0 59 21281.5 60 20400.0 61 19978.0 62 19556.0 63 16742.5 64 11490.5 65 9052.0 66 7234.5 67 5417.0 68 4696.0 69 3975.0 70 3461.5 71 2948.0 72 2602.0 73 2256.0 74 1667.5 75 1079.0 76 891.0 77 703.0 78 503.0 79 303.0 80 232.5 81 162.0 82 139.0 83 116.0 84 81.5 85 47.0 86 29.5 87 12.0 88 6.5 89 1.0 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 665182.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.56131887252923 #Duplication Level Percentage of deduplicated Percentage of total 1 68.94177321775558 18.311844220744018 2 12.680632849839926 6.736286652601349 3 4.772308984601198 3.8027646209468586 4 2.3201102241255156 2.4650074992965236 5 1.3081766561736832 1.737344865311412 6 0.8431621732327973 1.3437299606694637 7 0.5772011821027179 1.0731857256001776 8 0.4774222989456789 1.0144772735321725 9 0.37516495584054105 0.8968388419691063 >10 7.14181735348724 47.33428708302859 >50 0.4504648864710046 7.794993619863602 >100 0.10268783935925797 4.598817183942838 >500 0.006240697419623412 1.2355233662477008 >1k 0.0028366806452833696 1.6548990862461581 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTGCT 3263 0.490542438009447 No Hit CTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTGCTT 3093 0.4649855227591847 Illumina Single End Adapter 1 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTGCT 2235 0.3359982681431548 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1354 0.20355331322856 No Hit ACCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTGC 1037 0.15589718302660024 No Hit TCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTGCT 975 0.14657642570003396 No Hit CGCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTGC 910 0.13680466398669838 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 889 0.13364763327931303 No Hit GCCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTGC 830 0.12477788033951612 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCATA 812 0.1220718540189001 No Hit GCCACAACTAGATACATCAACATGATTTATCACAATTATCTCATCAATAATT 732 0.1100450703717178 No Hit ACTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTGCT 695 0.10448268293489602 No Hit AGCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTGC 670 0.10072431304515156 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.4734042713122123 0.0 2 0.0 0.0 0.0 1.5700966051396459 0.0 3 0.0 0.0 0.0 2.500217985453605 0.0 4 0.0 0.0 0.0 3.09419076282882 0.0 5 0.0 0.0 0.0 5.975507455102513 0.0 6 0.0 0.0 0.0 6.453271435486829 0.0 7 0.0 0.0 0.0 8.351699234194552 0.0 8 0.0 0.0 0.0 10.64580821489457 0.0 9 0.0 0.0 0.0 12.504096623179821 0.0 10 0.0 0.0 0.0 13.654608813828396 0.0 11 0.0 0.0 0.0 14.78512647666353 0.0 12 0.0 0.0 0.0 15.785905210904685 0.0 13 0.0 0.0 0.0 16.16986027884098 0.0 14 0.0 0.0 0.0 16.483909666828026 0.0 15 0.0 0.0 0.0 17.45191541563061 0.0 16 0.0 0.0 0.0 18.565896250950868 0.0 17 0.0 0.0 0.0 20.128776785902204 0.0 18 0.0 0.0 0.0 20.81911416725047 0.0 19 0.0 0.0 0.0 21.638438803214758 0.0 20 0.0 0.0 0.0 22.562997796091896 0.0 21 0.0 0.0 0.0 23.38187142766942 0.0 22 0.0 0.0 0.0 24.287638571097833 0.0 23 0.0 0.0 0.0 24.93738555763686 0.0 24 1.5033479558977843E-4 0.0 0.0 25.51301748995012 0.0 25 1.5033479558977843E-4 0.0 0.0 26.04835969704532 0.0 26 1.5033479558977843E-4 0.0 0.0 26.553935614613746 0.0 27 1.5033479558977843E-4 0.0 0.0 27.063119567276324 0.0 28 1.5033479558977843E-4 0.0 0.0 27.5753102158507 0.0 29 1.5033479558977843E-4 0.0 0.0 28.278877059210863 0.0 30 1.5033479558977843E-4 0.0 0.0 28.90998253109675 0.0 31 1.5033479558977843E-4 0.0 0.0 29.489673502890938 0.0 32 1.5033479558977843E-4 0.0 0.0 30.021708344483162 0.0 33 1.5033479558977843E-4 0.0 0.0 30.516610491564716 0.0 34 1.5033479558977843E-4 0.0 0.0 31.224236374405802 0.0 35 1.5033479558977843E-4 0.0 0.0 31.73627668818459 0.0 36 1.5033479558977843E-4 0.0 0.0 32.28860672718143 0.0 37 1.5033479558977843E-4 0.0 0.0 32.82079190356925 0.0 38 1.5033479558977843E-4 0.0 0.0 33.33583891325983 0.0 39 1.5033479558977843E-4 0.0 0.0 33.91342519791576 0.0 40 1.5033479558977843E-4 0.0 0.0 34.51130667997631 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATTTCG 30 1.8602113E-6 46.0 18 CGGGTAT 120 0.0 46.0 5 GGTACGA 25 3.415592E-5 46.0 7 ACACGTG 125 0.0 46.0 41 ACCGGGT 30 1.8602113E-6 46.0 3 GGTCGAA 20 6.309527E-4 46.0 7 GTTTCGG 25 3.415592E-5 46.0 1 GCGAAAC 20 6.309527E-4 46.0 8 GACGTGA 30 1.8602113E-6 46.0 9 GAATCGG 20 6.309527E-4 46.0 1 ACCTGAT 20 6.309527E-4 46.0 20 ATTCGTC 25 3.415592E-5 46.0 16 CTAACGG 45 3.092282E-10 46.0 1 CGTAGGT 20 6.309527E-4 46.0 23 CCATAGG 45 3.092282E-10 46.0 1 TCGTCAG 25 3.415592E-5 46.0 18 CGGGACC 85 0.0 46.0 5 GCGATGA 85 0.0 46.0 8 TTAACGG 50 1.6370905E-11 46.0 1 GCGATAC 40 5.6061253E-9 46.0 8 >>END_MODULE