##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1544750_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1564119 Sequences flagged as poor quality 0 Sequence length 52 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.706481412219915 33.0 31.0 34.0 31.0 34.0 2 33.12568161373911 34.0 33.0 34.0 31.0 34.0 3 33.17053689648933 34.0 33.0 34.0 31.0 34.0 4 36.48531729363303 37.0 37.0 37.0 35.0 37.0 5 36.48068401445158 37.0 37.0 37.0 35.0 37.0 6 36.55235503181024 37.0 37.0 37.0 35.0 37.0 7 36.631033188651244 37.0 37.0 37.0 35.0 37.0 8 36.63147944625697 37.0 37.0 37.0 35.0 37.0 9 38.362340077705085 39.0 39.0 39.0 37.0 39.0 10 38.26752440191571 39.0 39.0 39.0 37.0 39.0 11 38.107052596381735 39.0 39.0 39.0 35.0 39.0 12 37.4377672031348 39.0 35.0 39.0 35.0 39.0 13 37.321444212364916 39.0 35.0 39.0 35.0 39.0 14 38.421033821595415 40.0 35.0 41.0 35.0 41.0 15 38.46997319257678 40.0 35.0 41.0 35.0 41.0 16 38.56990612606841 40.0 35.0 41.0 35.0 41.0 17 38.5219276794157 40.0 35.0 41.0 35.0 41.0 18 38.524213950473076 40.0 36.0 41.0 35.0 41.0 19 38.49963781528132 40.0 36.0 41.0 35.0 41.0 20 38.38173118541492 40.0 35.0 41.0 35.0 41.0 21 38.323843006830046 40.0 35.0 41.0 35.0 41.0 22 38.27530386115123 40.0 35.0 41.0 35.0 41.0 23 38.21198451012998 40.0 35.0 41.0 35.0 41.0 24 38.148388965289726 40.0 35.0 41.0 35.0 41.0 25 38.13715324729129 40.0 35.0 41.0 35.0 41.0 26 38.097387730728926 40.0 35.0 41.0 35.0 41.0 27 38.05345501205471 40.0 35.0 41.0 35.0 41.0 28 38.03930647220576 40.0 35.0 41.0 35.0 41.0 29 37.986171128923054 40.0 35.0 41.0 35.0 41.0 30 37.91786878108379 40.0 35.0 41.0 35.0 41.0 31 37.81153096407626 40.0 35.0 41.0 34.0 41.0 32 37.69807476285372 40.0 35.0 41.0 34.0 41.0 33 37.55493475880032 40.0 35.0 41.0 34.0 41.0 34 37.37628594755258 40.0 35.0 41.0 34.0 41.0 35 37.261381646792856 40.0 35.0 41.0 34.0 41.0 36 37.18800743421696 40.0 35.0 41.0 34.0 41.0 37 37.169526103832254 40.0 35.0 41.0 34.0 41.0 38 37.047255995227985 40.0 35.0 41.0 33.0 41.0 39 37.0466403131731 40.0 35.0 41.0 33.0 41.0 40 36.96140255313055 40.0 35.0 41.0 33.0 41.0 41 36.91562023094151 39.0 35.0 41.0 33.0 41.0 42 36.91239733038215 39.0 35.0 41.0 33.0 41.0 43 36.87559961869909 39.0 35.0 41.0 33.0 41.0 44 36.77572358624887 39.0 35.0 41.0 33.0 41.0 45 36.6896284745598 39.0 35.0 41.0 33.0 41.0 46 36.63057606230728 39.0 35.0 41.0 33.0 41.0 47 36.60399176788978 39.0 35.0 41.0 33.0 41.0 48 36.533546360603 38.0 35.0 41.0 33.0 41.0 49 36.49201946910689 38.0 35.0 41.0 33.0 41.0 50 36.37931896486137 38.0 35.0 41.0 33.0 41.0 51 36.317723267858774 38.0 35.0 40.0 33.0 41.0 52 36.12002731249988 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 1.0 11 1.0 12 5.0 13 8.0 14 8.0 15 26.0 16 42.0 17 112.0 18 221.0 19 405.0 20 741.0 21 1328.0 22 2007.0 23 3330.0 24 5196.0 25 8444.0 26 11801.0 27 13529.0 28 13440.0 29 13639.0 30 14154.0 31 16774.0 32 21380.0 33 30651.0 34 86077.0 35 287045.0 36 64060.0 37 85623.0 38 168857.0 39 713011.0 40 2201.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.56683155181927 24.16747063362826 28.864619635718253 14.40107817883422 2 31.084591389785558 25.013889608143625 30.63155680609979 13.269962195971022 3 28.672818372515135 24.92815444349183 32.90152475610871 13.497502427884323 4 25.780007787131286 27.211932084451373 31.935997197144207 15.07206293127313 5 22.936170457618633 32.247674249849275 30.090357575094988 14.7257977174371 6 22.167750663472535 42.111821415122506 25.994057996865966 9.72636992453899 7 88.23235316494461 3.5795869751598186 6.5236724315733 1.6643874283222695 8 88.94719647290263 2.534206156948416 6.522010153958874 1.9965872161900724 9 84.53941164323176 4.737683002380254 7.8935809871243805 2.829324367263616 10 44.8782989018099 29.884490885923643 13.903609635839729 11.33360057642673 11 41.037734341185036 20.591208213697296 23.534910067584374 14.836147377533296 12 37.8936641010051 20.237782419368347 26.361868885935145 15.5066845936914 13 23.60057003335424 33.59392731627197 26.837408151170084 15.968094499203705 14 16.92754835150011 35.4336210991619 31.27594511670787 16.362885432630126 15 16.493757827889056 24.1514232612736 44.587080650513165 14.767738260324181 16 21.114505993469805 20.599263866751826 40.32116482185818 17.965065317920185 17 19.560596092752533 21.125438665472384 30.314253583007435 28.99971165876765 18 22.233474562996804 22.537671366436953 37.018347069500464 18.210507001065775 19 27.52821236747332 24.49947862023286 28.766992792747864 19.205316219545956 20 28.23704590251765 24.980068652065476 29.334660598074695 17.44822484734218 21 22.34753238084826 28.156745106989938 31.50086406469073 17.994858447471067 22 21.530714734620577 23.7887270725565 28.967680847812733 25.71287734501019 23 18.691800304196803 27.973255231858957 29.81301294850328 23.52193151544096 24 18.400070582864856 23.821652956073038 39.93653935538153 17.84173710568058 25 19.152251203393092 25.09463793995214 34.94663769188917 20.806473164765595 26 18.040826816885417 31.116302531968476 29.513035772853602 21.32983487829251 27 16.416334051309395 32.712920180625645 31.42772384965594 19.44302191840902 28 16.39255069467221 28.54578200252027 36.08101429622682 18.9806530065807 29 18.384087144264598 24.721776284285273 35.163500986817496 21.730635584632626 30 19.941257666456323 30.414629577417063 32.29076560031558 17.353347155811036 31 27.20982227055614 26.108051880963025 29.490083555023627 17.19204229345721 32 28.961798942407835 24.61315283555791 29.688981464965263 16.736066757068997 33 27.669889567226026 26.200627957335726 27.570152910360402 18.55932956507785 34 19.897654845954815 26.08938322467792 31.103068244807456 22.90989368455981 35 19.18530495441843 27.36556489627707 33.4297454349701 20.019384714334397 36 27.807219271679458 27.751021501560942 26.925636732243518 17.516122494516082 37 19.381773381692824 34.06467154992683 29.165491883929544 17.3880631844508 38 20.03070098886338 32.39305960735724 26.986885268959714 20.589354134819665 39 20.012415935104684 31.92506452514163 28.756315855762892 19.3062036839908 40 24.39692887817359 25.212531783067654 27.878505407836617 22.512033930922133 41 17.232320558729867 25.958382961910186 30.04138431922379 26.767912160136152 42 19.350509775790716 25.664159824156602 28.32987771390796 26.655452686144727 43 19.797342785299584 24.459967560013016 30.381000422602117 25.361689232085283 44 18.80119095797698 28.11378162403244 31.431623808674402 21.65340360931617 45 17.597957700149415 34.81992099066631 26.781977586104382 20.800143723079895 46 20.072449730487257 31.431687742428803 28.447579755760273 20.048282771323667 47 19.097779644643406 28.55805728336527 29.591034953222866 22.753128118768455 48 20.114837809655146 26.83977370008292 32.805943793279155 20.239444696982776 49 21.734215874879084 26.036829678560263 33.144600890341465 19.084353556219188 50 19.208768642283612 33.00324335936076 29.077135435347312 18.710852563008313 51 18.34304167393913 31.675531081714368 28.24708350195861 21.73434374238789 52 19.24546661730981 26.545678429838137 34.60286589447478 19.605989058377272 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 3646.0 1 4194.0 2 4742.0 3 10189.0 4 15636.0 5 10384.0 6 5132.0 7 5216.0 8 5300.0 9 5354.0 10 5408.0 11 5262.0 12 5116.0 13 5274.0 14 5223.5 15 5015.0 16 4896.5 17 4778.0 18 4898.0 19 5018.0 20 5762.0 21 6506.0 22 8330.5 23 10155.0 24 11014.5 25 11874.0 26 13787.0 27 15700.0 28 19788.0 29 23876.0 30 28273.5 31 32671.0 32 35693.5 33 38716.0 34 45011.5 35 51307.0 36 59563.0 37 67819.0 38 72132.5 39 90287.5 40 104129.0 41 116199.5 42 128270.0 43 139502.0 44 150734.0 45 143175.0 46 135616.0 47 129977.5 48 124339.0 49 112760.5 50 101182.0 51 93687.5 52 86193.0 53 77995.5 54 69798.0 55 64476.0 56 59154.0 57 53509.5 58 47865.0 59 44991.0 60 42117.0 61 37832.5 62 33548.0 63 29945.5 64 22647.5 65 18952.0 66 15720.0 67 12488.0 68 10370.0 69 8252.0 70 7012.5 71 5773.0 72 4617.5 73 3462.0 74 2999.5 75 2537.0 76 1977.5 77 1418.0 78 1203.5 79 989.0 80 646.0 81 303.0 82 253.0 83 203.0 84 127.0 85 51.0 86 70.0 87 89.0 88 53.0 89 10.5 90 4.0 91 2.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1564119.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.470424464558896 #Duplication Level Percentage of deduplicated Percentage of total 1 75.73968581129697 12.474647741243897 2 8.654804482470766 2.8509660696812094 3 3.0056761077698733 1.4851428389385923 4 1.5408701766848256 1.0151514341911576 5 1.0091233956903474 0.831034533206852 6 0.7286539184003362 0.720074359429056 7 0.597866799734634 0.6892983975427794 8 0.48643189556911604 0.6409391834498661 9 0.437410468551465 0.6483902474055795 >10 5.265926249015567 20.098349595471102 >50 1.0831251965569717 12.588756433504274 >100 1.444166920057301 44.49954875921445 >500 0.004302772513713519 0.4668944951608089 >1k 0.0015646445504412796 0.4571017584056767 >5k 3.911611376103199E-4 0.5337041531547041 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8284 0.5296272214582138 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3130 0.20011265127525463 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08867611735424223 0.0 2 0.0 0.0 0.0 0.25950710911382063 0.0 3 0.0 0.0 0.0 0.3454980087832192 0.0 4 0.0 0.0 0.0 0.4461297382104559 0.0 5 0.0 0.0 0.0 0.7274382575750311 0.0 6 6.393375440103982E-5 0.0 0.0 0.9580473096995816 0.0 7 6.393375440103982E-5 0.0 0.0 1.133481531776035 0.0 8 6.393375440103982E-5 0.0 0.0 1.5472607902595648 0.0 9 6.393375440103982E-5 0.0 0.0 1.6975051131020082 0.0 10 6.393375440103982E-5 0.0 0.0 1.998824897594109 0.0 11 6.393375440103982E-5 0.0 0.0 2.382874960281155 0.0 12 1.2786750880207964E-4 0.0 0.0 2.68566522112448 0.0 13 1.2786750880207964E-4 0.0 0.0 2.8014492503447626 0.0 14 1.2786750880207964E-4 0.0 0.0 2.848696294847131 0.0 15 1.2786750880207964E-4 0.0 0.0 2.918831623425072 0.0 16 1.2786750880207964E-4 0.0 0.0 3.066838264863479 0.0 17 1.2786750880207964E-4 0.0 0.0 3.2413134806239166 0.0 18 1.2786750880207964E-4 0.0 0.0 3.479850318294196 0.0 19 1.2786750880207964E-4 0.0 0.0 3.615837413905208 0.0 20 1.2786750880207964E-4 0.0 0.0 3.778484885101453 0.0 21 1.2786750880207964E-4 0.0 0.0 3.964659977917281 0.0 22 1.2786750880207964E-4 0.0 0.0 4.1718053421766506 0.0 23 1.2786750880207964E-4 0.0 0.0 4.386558823209743 0.0 24 1.9180126320311944E-4 0.0 0.0 4.5579012850045295 0.0 25 1.9180126320311944E-4 0.0 0.0 4.702199768687676 0.0 26 1.9180126320311944E-4 0.0 0.0 4.840424545702724 0.0 27 2.557350176041593E-4 0.0 0.0 5.0049260957766 0.0 28 3.196687720051991E-4 0.0 0.0 5.158047437567091 0.0 29 3.196687720051991E-4 0.0 0.0 5.347099549330966 0.0 30 3.196687720051991E-4 0.0 0.0 5.5708037559802035 0.0 31 3.196687720051991E-4 0.0 0.0 5.754677233637594 0.0 32 3.196687720051991E-4 0.0 0.0 5.922695140203527 0.0 33 3.196687720051991E-4 0.0 0.0 6.1021571888072454 0.0 34 3.196687720051991E-4 0.0 0.0 6.302078038819297 0.0 35 3.196687720051991E-4 0.0 0.0 6.53901653262955 0.0 36 3.196687720051991E-4 0.0 0.0 6.722058871479727 0.0 37 3.196687720051991E-4 0.0 0.0 6.910791314471597 0.0 38 3.196687720051991E-4 0.0 0.0 7.161091962951668 0.0 39 3.196687720051991E-4 0.0 0.0 7.625890357447227 0.0 40 3.196687720051991E-4 0.0 0.0 7.889425293088314 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAC 35 1.0198892E-7 46.000004 46 TATATCG 35 1.0198892E-7 46.000004 31 ATCGTTA 35 1.0198892E-7 46.000004 45 GTCCGAT 35 1.0198892E-7 46.000004 41 ACGTCCA 70 0.0 46.000004 18 CAACGTA 30 1.8618375E-6 46.0 9 ATTACCG 40 5.6134013E-9 46.0 22 TTATCCG 40 5.6134013E-9 46.0 1 ATCGTAA 20 6.3121575E-4 46.0 14 TACGCTT 20 6.3121575E-4 46.0 35 CTAACCG 20 6.3121575E-4 46.0 1 CGTAGAC 25 3.417725E-5 46.0 11 CACTACG 20 6.3121575E-4 46.0 1 TCTAACG 20 6.3121575E-4 46.0 1 ACGCTTA 20 6.3121575E-4 46.0 18 CGTACCG 30 1.8618375E-6 46.0 30 CTCGACA 20 6.3121575E-4 46.0 33 CCAACGT 20 6.3121575E-4 46.0 45 GCTCGAC 20 6.3121575E-4 46.0 32 CAATCGA 20 6.3121575E-4 46.0 34 >>END_MODULE