##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1544744_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1152250 Sequences flagged as poor quality 0 Sequence length 52 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.678314601865914 33.0 31.0 34.0 31.0 34.0 2 33.08353308743762 34.0 33.0 34.0 31.0 34.0 3 33.13800130180083 34.0 33.0 34.0 31.0 34.0 4 36.45674376220438 37.0 37.0 37.0 35.0 37.0 5 36.45016012150141 37.0 37.0 37.0 35.0 37.0 6 36.522649598611416 37.0 37.0 37.0 35.0 37.0 7 36.61382078541983 37.0 37.0 37.0 35.0 37.0 8 36.60985289650684 37.0 37.0 37.0 35.0 37.0 9 38.30447125189846 39.0 39.0 39.0 37.0 39.0 10 38.2198403124322 39.0 39.0 39.0 37.0 39.0 11 38.02587546105446 39.0 39.0 39.0 35.0 39.0 12 37.263897591668474 39.0 35.0 39.0 35.0 39.0 13 37.14058754610544 39.0 35.0 39.0 35.0 39.0 14 38.276966804078974 40.0 35.0 41.0 35.0 41.0 15 38.280012150141026 40.0 35.0 41.0 35.0 41.0 16 38.3537287914949 40.0 35.0 41.0 35.0 41.0 17 38.30548665654155 40.0 35.0 41.0 35.0 41.0 18 38.347216315903665 40.0 36.0 41.0 35.0 41.0 19 38.338350184421785 40.0 36.0 41.0 35.0 41.0 20 38.19772792362768 40.0 35.0 41.0 35.0 41.0 21 38.12574701670644 40.0 35.0 41.0 35.0 41.0 22 38.061720980689955 40.0 35.0 41.0 35.0 41.0 23 37.98817444131048 40.0 35.0 41.0 35.0 41.0 24 37.91461314818833 40.0 35.0 41.0 35.0 41.0 25 37.92450683445433 40.0 35.0 41.0 35.0 41.0 26 37.89152874810154 40.0 35.0 41.0 35.0 41.0 27 37.879362985463224 40.0 35.0 41.0 35.0 41.0 28 37.846920373182904 40.0 35.0 41.0 35.0 41.0 29 37.82438880451291 40.0 35.0 41.0 35.0 41.0 30 37.77994445649816 40.0 35.0 41.0 35.0 41.0 31 37.63196702104578 40.0 35.0 41.0 35.0 41.0 32 37.52274766760686 40.0 35.0 41.0 34.0 41.0 33 37.393331308309826 40.0 35.0 41.0 34.0 41.0 34 37.23434410935127 40.0 35.0 41.0 34.0 41.0 35 37.11425905836407 40.0 35.0 41.0 34.0 41.0 36 37.02899023649382 39.0 35.0 41.0 34.0 41.0 37 36.99795964417444 39.0 35.0 41.0 34.0 41.0 38 36.88599349099588 39.0 35.0 41.0 33.0 41.0 39 36.9087871555652 39.0 35.0 41.0 33.0 41.0 40 36.79405250596659 39.0 35.0 41.0 33.0 41.0 41 36.777436320243005 39.0 35.0 41.0 33.0 41.0 42 36.76643002820568 39.0 35.0 41.0 33.0 41.0 43 36.69617357344326 39.0 35.0 41.0 33.0 41.0 44 36.60119244955522 39.0 35.0 41.0 33.0 41.0 45 36.51167715339553 38.0 35.0 41.0 33.0 41.0 46 36.47195573877197 38.0 35.0 41.0 33.0 41.0 47 36.41986287697982 38.0 35.0 41.0 33.0 41.0 48 36.38026296376654 38.0 35.0 41.0 33.0 41.0 49 36.33918507268388 38.0 35.0 41.0 33.0 41.0 50 36.22995443697114 38.0 35.0 40.0 32.0 41.0 51 36.14703406378824 37.0 35.0 40.0 32.0 41.0 52 35.91967888912996 37.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 2.0 10 6.0 11 0.0 12 5.0 13 9.0 14 16.0 15 16.0 16 59.0 17 82.0 18 158.0 19 325.0 20 619.0 21 1000.0 22 1591.0 23 2627.0 24 4148.0 25 6550.0 26 8869.0 27 9686.0 28 9674.0 29 9854.0 30 10962.0 31 12949.0 32 16084.0 33 22550.0 34 60570.0 35 257018.0 36 44328.0 37 57385.0 38 113937.0 39 499546.0 40 1624.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.32410501193318 22.95942720763723 27.714471685832066 14.001996094597526 2 30.96211759600781 25.805510956823607 29.11642438706878 14.115947060099804 3 29.371490561944025 25.363159036667387 31.15625949229768 14.10909090909091 4 25.539162508136254 28.50952484269907 31.084573660229985 14.866738988934694 5 23.08014753742677 32.28075504447819 29.695465393794752 14.943632024300282 6 22.32649164677804 41.916077240182254 25.483619006292034 10.273812106747668 7 87.51555651985247 4.360945975265784 6.138164460837492 1.9853330440442611 8 88.04417444131047 3.3247993057062266 6.475417661097851 2.1556085918854415 9 83.36836623996528 5.698155782165329 7.7664569320893895 3.1670210457799954 10 48.216185723584296 27.047081796485138 13.466435235408984 11.270297244521588 11 44.290735517465826 20.727185940551095 22.21158602733782 12.770492514645259 12 41.8689520503363 20.813451941852897 24.207246691256238 13.110349316554567 13 21.182382295508788 41.22108917335648 23.920503362985464 13.676025168149271 14 14.91898459535691 42.54632241267086 27.581948361900626 14.9527446300716 15 14.056932089390322 24.875417661097853 47.40507702321545 13.662573226296375 16 16.70227815144283 20.560729008461706 45.74580169234107 16.991191147754396 17 16.121848557170754 20.34706009980473 30.60360164894771 32.927489694076804 18 19.535864612714253 23.069125623779563 38.40598828379258 18.989021479713603 19 27.433282707745715 24.73004990236494 28.64300282056845 19.193664569320894 20 30.382903015838576 22.855977435452377 29.58255586895205 17.178563679756998 21 20.12184855717075 29.6249945758299 30.69941418962899 19.553742677370362 22 21.330440442612282 25.150184421783468 26.78524625732263 26.73412887828162 23 16.758776307224995 31.25910175743111 27.41835539162508 24.563766543718813 24 17.138381427641573 22.956302885658495 42.57313950965502 17.33217617704491 25 14.81527446300716 26.48366239965285 38.90032545020612 19.800737687133868 26 15.797960512041659 35.33113473638533 29.102191364721197 19.76871338685181 27 14.961423302234758 37.82642655673682 29.62230418745932 17.589845953569103 28 14.829767845519633 28.97522239097418 39.27880234324149 16.9162074202647 29 15.195139943588632 25.0225211542634 37.817834671295294 21.96450423085268 30 17.678628769798223 34.210978520286396 30.671729225428507 17.438663484486874 31 27.4008244738555 28.34523757865047 27.27359513994359 16.980342807550443 32 28.772488609242785 25.625341722716428 29.52171837708831 16.080451290952485 33 28.729529182035147 27.686960295074854 25.843089607290086 17.740420915599913 34 19.567107832501627 27.27151225862443 28.6936862660013 24.46769364287264 35 19.148275113907573 26.39114775439358 33.76576263831634 20.694814493382513 36 30.160121501410288 25.413148188327185 27.79205901497071 16.63467129529182 37 19.72505966587112 34.53859839444565 30.13217617704491 15.604165762638317 38 19.29060533738338 34.074376220438275 26.214102842265135 20.420915599913215 39 20.150314601865915 33.62456064222174 28.493642872640486 17.73148188327186 40 24.968973747016708 26.172792362768497 27.353612497287916 21.504621392926882 41 16.728661314818833 24.892341071816013 30.23935777825993 28.13963983510523 42 20.509264482534174 23.909134302451726 27.43354306791061 28.148058147103495 43 20.40104144065958 24.56767194619223 29.215448036450425 25.815838576697764 44 17.77036233456281 29.146192232588415 31.702321544803645 21.381123888045128 45 16.97964851377739 38.40182252115426 25.919201562160985 18.699327402907358 46 20.47576480798438 33.99227598177479 27.755348231720546 17.776610978520285 47 19.17101323497505 29.317248860924277 28.046951616402687 23.464786287697983 48 20.70609676719462 24.52401822521154 34.52054675634628 20.249338251247558 49 20.970101974397917 25.370362334562813 34.61939683228466 19.04013885875461 50 19.49307875894988 34.09815578216533 28.05250596658711 18.356259492297678 51 17.43753525710566 34.03584291603385 26.921501410284225 21.605120416576266 52 20.040182252115425 26.723193751356046 35.05237578650466 18.184248210023863 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3336.0 1 3354.0 2 3372.0 3 5787.0 4 8202.0 5 5684.0 6 3166.0 7 3289.0 8 3412.0 9 3658.5 10 3905.0 11 4177.5 12 4450.0 13 4361.5 14 4333.5 15 4394.0 16 4073.5 17 3753.0 18 3756.0 19 3759.0 20 3992.5 21 4226.0 22 5065.0 23 5904.0 24 6538.0 25 7172.0 26 10164.0 27 13156.0 28 16020.5 29 18885.0 30 21018.5 31 23152.0 32 26351.5 33 29551.0 34 32408.0 35 35265.0 36 40200.0 37 45135.0 38 49439.0 39 63173.0 40 72603.0 41 95315.0 42 118027.0 43 122647.0 44 127267.0 45 121825.0 46 116383.0 47 108191.5 48 100000.0 49 91372.0 50 82744.0 51 75768.0 52 68792.0 53 60116.5 54 51441.0 55 43032.0 56 34623.0 57 30142.0 58 25661.0 59 23649.5 60 21638.0 61 19772.5 62 17907.0 63 14700.0 64 9523.5 65 7554.0 66 6534.5 67 5515.0 68 4129.0 69 2743.0 70 2578.0 71 2413.0 72 1826.0 73 1239.0 74 1059.0 75 879.0 76 670.0 77 461.0 78 392.0 79 323.0 80 232.0 81 141.0 82 122.0 83 103.0 84 67.5 85 32.0 86 31.5 87 31.0 88 23.5 89 12.0 90 8.0 91 5.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1152250.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.224689618537546 #Duplication Level Percentage of deduplicated Percentage of total 1 76.76947394310316 12.455608869052547 2 9.146870031199947 2.96810254474644 3 3.0710320699517326 1.4947962643062525 4 1.4562533970872953 0.9450903749472909 5 0.8492890436595882 0.68897255649007 6 0.5903766254961261 0.5747206504028536 7 0.4540071374645364 0.5156287422973969 8 0.3540359113860531 0.459529822084382 9 0.29852470173792184 0.435912356624785 >10 4.221214477461311 16.51240878394958 >50 1.1294517974895626 12.973300243975238 >100 1.651399507620507 48.54214339471131 >500 0.005918994650969559 0.6216882303993756 >1k 0.0021523616912616575 0.8120971660124969 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4190 0.36363636363636365 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2853 0.24760251681492734 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1026686916901714 0.0 2 0.0 0.0 0.0 0.3205901497070948 0.0 3 0.0 0.0 0.0 0.41657626383163376 0.0 4 0.0 0.0 0.0 0.5256671729225428 0.0 5 0.0 0.0 0.0 0.8222174007376871 0.0 6 0.0 0.0 0.0 1.0402256454762422 0.0 7 0.0 0.0 0.0 1.18472553699284 0.0 8 0.0 0.0 0.0 1.535170318941202 0.0 9 0.0 0.0 0.0 1.6860924278585376 0.0 10 0.0 0.0 0.0 2.035582555868952 0.0 11 0.0 0.0 0.0 2.5062269472770664 0.0 12 0.0 0.0 0.0 2.887047081796485 0.0 13 0.0 0.0 0.0 3.0363202430028204 0.0 14 0.0 0.0 0.0 3.0886526361466697 0.0 15 0.0 0.0 0.0 3.183857669776524 0.0 16 0.0 0.0 0.0 3.392406161857236 0.0 17 0.0 0.0 0.0 3.6462573226296375 0.0 18 0.0 0.0 0.0 3.9856801909307875 0.0 19 0.0 0.0 0.0 4.135560859188544 0.0 20 8.678672163159037E-5 0.0 0.0 4.307485354740725 0.0 21 8.678672163159037E-5 0.0 0.0 4.529659362117596 0.0 22 8.678672163159037E-5 0.0 0.0 4.738121067476676 0.0 23 8.678672163159037E-5 0.0 0.0 5.003948795834237 0.0 24 1.7357344326318074E-4 0.0 0.0 5.186287697982209 0.0 25 3.471468865263615E-4 0.0 0.0 5.347450640052072 0.0 26 3.471468865263615E-4 0.0 0.0 5.493686266001302 0.0 27 3.471468865263615E-4 0.0 0.0 5.645389455413322 0.0 28 4.3393360815795185E-4 0.0 0.0 5.809329572575396 0.0 29 4.3393360815795185E-4 0.0 0.0 5.969277500542417 0.0 30 4.3393360815795185E-4 0.0 0.0 6.1661965719244956 0.0 31 4.3393360815795185E-4 0.0 0.0 6.366326752006943 0.0 32 4.3393360815795185E-4 0.0 0.0 6.545628118897809 0.0 33 4.3393360815795185E-4 0.0 0.0 6.733347797786939 0.0 34 4.3393360815795185E-4 0.0 0.0 6.907702321544804 0.0 35 4.3393360815795185E-4 0.0 0.0 7.13777392059015 0.0 36 4.3393360815795185E-4 0.0 0.0 7.327923627684965 0.0 37 5.207203297895422E-4 0.0 0.0 7.524495552180516 0.0 38 5.207203297895422E-4 0.0 0.0 7.7100455630288565 0.0 39 5.207203297895422E-4 0.0 0.0 7.900195270123671 0.0 40 5.207203297895422E-4 0.0 0.0 8.113690605337384 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATCCGG 75 0.0 46.000004 2 TACCCGT 25 3.4171608E-5 46.0 16 CGACGAT 20 6.3114613E-4 46.0 35 ACGTTCA 20 6.3114613E-4 46.0 31 CTATCCG 50 1.6370905E-11 46.0 1 CATTGCG 20 6.3114613E-4 46.0 1 CAACCGG 65 0.0 46.0 2 CAATTCG 30 1.8614082E-6 46.0 1 AAGCGCA 25 3.4171608E-5 46.0 24 CGACACA 40 5.6115823E-9 46.0 41 TCGATAT 40 5.6115823E-9 46.0 17 ATCGTCC 25 3.4171608E-5 46.0 15 CCCGTTG 30 1.8614082E-6 46.0 45 ATATCGG 25 3.4171608E-5 46.0 2 GCCGAAC 25 3.4171608E-5 46.0 11 CGTAGGT 25 3.4171608E-5 46.0 2 CTACGGC 20 6.3114613E-4 46.0 17 CTACGCG 30 1.8614082E-6 46.0 19 TATTCGC 20 6.3114613E-4 46.0 26 ATCCCGC 40 5.6115823E-9 46.0 39 >>END_MODULE