##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1544722_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1546212 Sequences flagged as poor quality 0 Sequence length 52 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.645921128538646 33.0 31.0 34.0 31.0 34.0 2 33.03647947370736 34.0 33.0 34.0 31.0 34.0 3 33.076100172550724 34.0 33.0 34.0 31.0 34.0 4 36.40874343233657 37.0 37.0 37.0 35.0 37.0 5 36.39582541074574 37.0 37.0 37.0 35.0 37.0 6 36.46754455404563 37.0 37.0 37.0 35.0 37.0 7 36.598506543733976 37.0 37.0 37.0 35.0 37.0 8 36.58978522996846 37.0 37.0 37.0 35.0 37.0 9 38.320029853603515 39.0 39.0 39.0 37.0 39.0 10 38.185482973874215 39.0 39.0 39.0 37.0 39.0 11 37.93542476710826 39.0 38.0 39.0 35.0 39.0 12 37.04682022905009 39.0 35.0 39.0 35.0 39.0 13 36.90091203534832 39.0 35.0 39.0 35.0 39.0 14 37.93720524740463 40.0 35.0 41.0 35.0 41.0 15 37.99086347797068 40.0 35.0 41.0 35.0 41.0 16 38.08361854648651 40.0 35.0 41.0 35.0 41.0 17 38.064645727752726 40.0 35.0 41.0 35.0 41.0 18 38.123907329654664 40.0 36.0 41.0 35.0 41.0 19 38.08703010971329 40.0 36.0 41.0 35.0 41.0 20 37.911647949957704 40.0 35.0 41.0 35.0 41.0 21 37.83280559198868 40.0 35.0 41.0 35.0 41.0 22 37.7585356988563 39.0 35.0 41.0 35.0 41.0 23 37.70880060431558 39.0 35.0 41.0 35.0 41.0 24 37.65420718504319 39.0 35.0 41.0 35.0 41.0 25 37.65452473528856 39.0 35.0 41.0 35.0 41.0 26 37.59986728857363 39.0 35.0 41.0 35.0 41.0 27 37.57176894242187 39.0 35.0 41.0 35.0 41.0 28 37.58282887469506 39.0 35.0 41.0 35.0 41.0 29 37.57768080961731 39.0 35.0 41.0 35.0 41.0 30 37.5282593848709 39.0 35.0 41.0 35.0 41.0 31 37.3902446753744 39.0 35.0 41.0 34.0 41.0 32 37.2454385297747 39.0 35.0 41.0 34.0 41.0 33 37.11568788756005 39.0 35.0 41.0 34.0 41.0 34 36.99728368425546 39.0 35.0 41.0 34.0 41.0 35 36.87981143594798 38.0 35.0 41.0 34.0 41.0 36 36.801795614055514 38.0 35.0 41.0 33.0 41.0 37 36.778235455422674 38.0 35.0 41.0 33.0 41.0 38 36.66471027258875 38.0 35.0 41.0 33.0 41.0 39 36.700109687416735 38.0 35.0 41.0 33.0 41.0 40 36.600967396450166 38.0 35.0 41.0 33.0 41.0 41 36.59365274619522 38.0 35.0 41.0 33.0 41.0 42 36.59103732217833 38.0 35.0 41.0 33.0 41.0 43 36.53315974782242 38.0 35.0 41.0 33.0 41.0 44 36.432377319539626 38.0 35.0 41.0 33.0 41.0 45 36.352717479879864 38.0 35.0 41.0 33.0 41.0 46 36.3057342718851 37.0 35.0 41.0 33.0 41.0 47 36.2477758547987 37.0 35.0 41.0 33.0 41.0 48 36.233561115810765 37.0 35.0 41.0 33.0 41.0 49 36.2664634603793 37.0 35.0 40.0 33.0 41.0 50 36.11599897038698 37.0 35.0 40.0 33.0 41.0 51 36.05748047486373 37.0 35.0 40.0 33.0 41.0 52 35.850656313623226 36.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 5.0 13 5.0 14 17.0 15 28.0 16 57.0 17 132.0 18 232.0 19 425.0 20 823.0 21 1324.0 22 2090.0 23 3422.0 24 5674.0 25 9091.0 26 12009.0 27 13237.0 28 13461.0 29 13834.0 30 15284.0 31 18222.0 32 23575.0 33 33349.0 34 87456.0 35 396946.0 36 65186.0 37 70595.0 38 135383.0 39 621352.0 40 2996.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.822609060077145 24.224879900039582 30.067028324705795 13.88548271517748 2 29.827345797342147 25.818581151873094 30.234405113917106 14.119667936867646 3 28.267857189052986 25.298406686793275 32.429576280613524 14.004159843540211 4 25.02871533787087 28.509221245210874 31.62793976505162 14.834123651866626 5 22.173414771066323 32.873176511371014 30.157442834488414 14.795965883074249 6 21.80716486484389 41.99689305218172 25.07786771801021 11.118074364964183 7 87.70175111821665 4.2287862207769695 6.06870209259791 2.000760568408472 8 87.70369134374847 3.1841687944473334 6.166683481954609 2.9454563798495936 9 83.55568317927943 4.634422705295264 8.337731177872115 3.472162937553194 10 52.17305259563372 24.815290529371133 12.180412517817738 10.831244357177413 11 46.430308392380866 19.540981443683016 21.363693982455185 12.665016181480935 12 42.53375345683516 20.606035912281108 24.433518818894175 12.426691811989558 13 19.57558213233373 44.163284206822865 23.816850470698714 12.44428319014469 14 12.994143105861292 45.826574881064175 27.60151906724304 13.57776294583149 15 10.932588804122592 24.0256187379221 51.421344550423875 13.620447907531439 16 13.607513070652665 20.072215194294184 48.764787752261654 17.555483982791493 17 12.952169560189677 19.442288638297985 30.360067054194378 37.245474747317964 18 18.231135187154155 22.52265536679317 39.77992668534457 19.466282760708104 19 28.461944416418966 23.6695226786495 27.37140831916969 20.49712458576185 20 30.298755927389 22.669659787920416 28.435622023370666 18.595962261319922 21 19.4863317578702 31.238665849184976 30.09238060498819 19.182621787956634 22 19.272971623554856 23.92614984232434 26.366953561348637 30.433924972772168 23 15.206129560500111 31.928739396667467 26.57630389623156 26.288827146600852 24 15.282509772269263 22.874547604080163 44.29631900412104 17.546623619529534 25 13.605378822567667 25.37103579586758 40.39704775283079 20.626537628733963 26 13.301086784994553 36.767661873016124 28.464466709610324 21.466784632379003 27 13.696504748378619 40.0956660535554 28.569174214143985 17.638654983922 28 12.211844171433155 30.282587381290533 39.65245386790427 17.85311457937204 29 12.497186672978868 24.293240512943893 38.72657824412176 24.48299456995548 30 16.082270736483743 35.108639694944806 31.151355700253262 17.657733868318186 31 28.061287844099 28.156229546789184 26.586263720628217 17.196218888483596 32 29.942142474641255 24.391480599038164 28.589029188752903 17.07734773756768 33 27.401158443990862 27.55049113575629 25.76153852123771 19.28681189901514 34 16.47697728383947 26.579925650557623 28.56775138208732 28.375345683515583 35 16.64474211815715 24.015076845865895 35.063755810975465 24.27642522500149 36 29.974544241022578 24.69460850129219 27.740762586243022 17.590084671442206 37 16.97981906750174 34.592863074403766 31.198891225782756 17.228426632311738 38 16.08408161364677 35.94131981901576 26.304931018514928 21.66966754882254 39 18.549849567847097 33.72648770026361 28.549642610457038 19.174020121432246 40 24.603870620587603 24.445806913929008 27.043186833370847 23.907135632112546 41 14.524463656988823 23.995480567994555 29.59665298160925 31.883402793407374 42 18.39353206416714 22.57827516537189 28.36609727514726 30.662095495313707 43 19.02611026172349 23.10414095867837 30.80379663332066 27.065952146277482 44 16.036416739748496 28.878575512284215 32.250687486580105 22.834320261387184 45 14.69882525811467 40.17540932291303 24.699200368384155 20.426565050588145 46 19.754794297289116 34.8147602010591 26.283006470005404 19.14743903164637 47 17.137171358132004 27.600160909370775 28.36926631018256 26.89340142231466 48 18.145829937938654 24.011519765724234 36.563226776147125 21.279423520189987 49 20.88930883992622 23.066306560807963 36.53709840565201 19.50728619361381 50 18.205718232687367 34.91914433467079 27.953217281976855 18.92192015066498 51 15.881392719756413 33.52147053573508 26.104376372709563 24.49276037179895 52 18.152038659640464 25.522890780824365 36.62725421869705 19.697816340838127 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 7010.0 1 6165.0 2 5320.0 3 8250.0 4 11180.0 5 7663.0 6 4146.0 7 4560.0 8 4974.0 9 5177.0 10 5380.0 11 5607.5 12 5835.0 13 6046.0 14 6083.5 15 5910.0 16 5477.5 17 5045.0 18 4922.0 19 4799.0 20 4102.5 21 3406.0 22 4645.5 23 5885.0 24 6999.5 25 8114.0 26 9805.5 27 11497.0 28 14385.0 29 17273.0 30 20689.0 31 24105.0 32 26826.0 33 29547.0 34 34371.0 35 39195.0 36 43143.5 37 47092.0 38 54990.5 39 87508.0 40 112127.0 41 141770.0 42 171413.0 43 189031.5 44 206650.0 45 206112.5 46 205575.0 47 176387.5 48 147200.0 49 128236.0 50 109272.0 51 97757.5 52 86243.0 53 72205.0 54 58167.0 55 49328.0 56 40489.0 57 34909.5 58 29330.0 59 25029.0 60 20728.0 61 18129.0 62 15530.0 63 13113.0 64 8407.5 65 6119.0 66 5231.0 67 4343.0 68 3433.5 69 2524.0 70 2239.0 71 1954.0 72 1683.0 73 1412.0 74 1090.0 75 768.0 76 614.5 77 461.0 78 343.5 79 226.0 80 154.0 81 82.0 82 55.5 83 29.0 84 17.5 85 6.0 86 6.0 87 6.0 88 4.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1546212.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.371704803009308 #Duplication Level Percentage of deduplicated Percentage of total 1 71.81099872355496 11.756684727113198 2 11.683765079179944 3.8256630572808534 3 4.664316271938814 2.2908842733616543 4 2.488915721421542 1.6299117388272975 5 1.464951556015202 1.1991877212895021 6 0.9423560090333657 0.925678463954174 7 0.6963913822376128 0.7980779896147671 8 0.47704320679793955 0.6248008447981431 9 0.39324368939827115 0.5794262638627299 >10 3.2227350315426855 11.698414773440744 >50 0.8571787854234242 10.042797292958898 >100 1.2614933791405012 49.17105262811023 >500 0.03183579505717353 3.333048746634865 >1k 0.003979474382146691 1.3213229662523052 >5k 7.958948764293382E-4 0.8030485125006614 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6224 0.40253212366738844 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 6102 0.3946418731713374 No Hit CTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGCTT 4315 0.27906910565950854 Illumina Single End Adapter 1 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGCT 3375 0.21827537232927954 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2432 0.157287616445869 No Hit GCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGCT 2241 0.14493484722664163 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.467418439386061E-5 0.0 0.0 0.28986969445328326 0.0 2 6.467418439386061E-5 0.0 0.0 0.8502715022260854 0.0 3 6.467418439386061E-5 0.0 0.0 1.135355307034223 0.0 4 6.467418439386061E-5 0.0 0.0 1.4942970304201493 0.0 5 6.467418439386061E-5 0.0 0.0 2.4789614878166772 0.0 6 6.467418439386061E-5 0.0 0.0 3.185074233028847 0.0 7 6.467418439386061E-5 0.0 0.0 3.6546088117282753 0.0 8 6.467418439386061E-5 0.0 0.0 4.696251225575795 0.0 9 6.467418439386061E-5 0.0 0.0 5.025960217615696 0.0 10 6.467418439386061E-5 0.0 0.0 5.666946059143248 0.0 11 6.467418439386061E-5 0.0 0.0 6.479383163498925 0.0 12 6.467418439386061E-5 0.0 0.0 7.113772238218304 0.0 13 6.467418439386061E-5 0.0 0.0 7.363414589978606 0.0 14 6.467418439386061E-5 0.0 0.0 7.441670353095177 0.0 15 6.467418439386061E-5 0.0 0.0 7.591908483442115 0.0 16 6.467418439386061E-5 0.0 0.0 7.9471637783175915 0.0 17 6.467418439386061E-5 0.0 0.0 8.388629760990083 0.0 18 1.2934836878772122E-4 0.0 0.0 9.021531329468404 0.0 19 1.2934836878772122E-4 0.0 0.0 9.290705284915651 0.0 20 1.2934836878772122E-4 0.0 0.0 9.582967924191507 0.0 21 1.2934836878772122E-4 0.0 0.0 9.964739634668467 0.0 22 1.2934836878772122E-4 0.0 0.0 10.354724966563447 0.0 23 1.2934836878772122E-4 0.0 0.0 10.840557439730128 0.0 24 1.9402255318158183E-4 0.0 0.0 11.15403321148717 0.0 25 1.9402255318158183E-4 0.0 0.0 11.409431565658526 0.0 26 1.9402255318158183E-4 0.0 0.0 11.680998465928345 0.0 27 1.9402255318158183E-4 0.0 0.0 11.926048950596684 0.0 28 1.9402255318158183E-4 0.0 0.0 12.22568444689344 0.0 29 1.9402255318158183E-4 0.0 0.0 12.503977462340222 0.0 30 1.9402255318158183E-4 0.0 0.0 12.87132682969735 0.0 31 2.5869673757544244E-4 0.0 0.0 13.213970658616024 0.0 32 2.5869673757544244E-4 0.0 0.0 13.522789889096709 0.0 33 2.5869673757544244E-4 0.0 0.0 13.840016763548595 0.0 34 3.2337092196930306E-4 0.0 0.0 14.154009928780788 0.0 35 3.2337092196930306E-4 0.0 0.0 14.54955724053364 0.0 36 3.2337092196930306E-4 0.0 0.0 14.869306408176886 0.0 37 3.2337092196930306E-4 0.0 0.0 15.185757192416046 0.0 38 3.2337092196930306E-4 0.0 0.0 15.484875295237652 0.0 39 3.8804510636316367E-4 0.0 0.0 15.809216329972863 0.0 40 3.8804510636316367E-4 0.0 0.0 16.154317777898502 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTAACG 30 1.861823E-6 46.0 1 TATCACG 25 3.4177065E-5 46.0 1 ATCTCGA 30 1.861823E-6 46.0 20 CAAACGT 25 3.4177065E-5 46.0 45 CGAACAC 20 6.312135E-4 46.0 15 GCGACTA 55 1.8189894E-12 46.0 46 CGTATTA 40 5.6134013E-9 46.0 10 GTCGACG 30 1.861823E-6 46.0 25 TTTACTC 25 3.4177065E-5 46.0 31 CGAGTCT 20 6.312135E-4 46.0 14 CGACGTG 30 1.861823E-6 46.0 27 GTTTCGA 40 5.6134013E-9 46.0 34 ACGCATG 40 5.6134013E-9 46.0 1 TTAGCGA 20 6.312135E-4 46.0 28 ACCGCGT 30 1.861823E-6 46.0 27 TAGGTCG 25 3.4177065E-5 46.0 41 CGCATCG 20 6.312135E-4 46.0 21 ACCGAAC 25 3.4177065E-5 46.0 11 GCGCCTA 20 6.312135E-4 46.0 10 GCGCCCA 20 6.312135E-4 46.0 9 >>END_MODULE