##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1544711_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1512648 Sequences flagged as poor quality 0 Sequence length 52 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.69437502974915 33.0 31.0 34.0 31.0 34.0 2 33.1181140622273 34.0 33.0 34.0 31.0 34.0 3 33.16430921139617 34.0 33.0 34.0 31.0 34.0 4 36.49036127373983 37.0 37.0 37.0 35.0 37.0 5 36.49163519867147 37.0 37.0 37.0 35.0 37.0 6 36.55249668131647 37.0 37.0 37.0 35.0 37.0 7 36.626316234841156 37.0 37.0 37.0 35.0 37.0 8 36.61280549076851 37.0 37.0 37.0 35.0 37.0 9 38.30686848493503 39.0 39.0 39.0 37.0 39.0 10 38.234888090289346 39.0 39.0 39.0 37.0 39.0 11 38.105885837286664 39.0 39.0 39.0 35.0 39.0 12 37.54879786969606 39.0 35.0 39.0 35.0 39.0 13 37.44916993246281 39.0 35.0 39.0 35.0 39.0 14 38.69415290272423 41.0 36.0 41.0 35.0 41.0 15 38.707850074835655 41.0 36.0 41.0 35.0 41.0 16 38.75095527842565 41.0 36.0 41.0 35.0 41.0 17 38.71716023820479 40.0 36.0 41.0 35.0 41.0 18 38.7218334999286 40.0 36.0 41.0 35.0 41.0 19 38.70190883801122 40.0 36.0 41.0 35.0 41.0 20 38.568034334491564 40.0 35.0 41.0 35.0 41.0 21 38.50224969721971 40.0 35.0 41.0 35.0 41.0 22 38.42513922604598 40.0 35.0 41.0 35.0 41.0 23 38.355304076030905 40.0 35.0 41.0 35.0 41.0 24 38.32709724932701 40.0 35.0 41.0 35.0 41.0 25 38.31301730475299 40.0 35.0 41.0 35.0 41.0 26 38.26088620749837 40.0 35.0 41.0 35.0 41.0 27 38.231946890486086 40.0 35.0 41.0 35.0 41.0 28 38.18501991210116 40.0 35.0 41.0 35.0 41.0 29 38.15220130526071 40.0 36.0 41.0 35.0 41.0 30 38.09021662673669 40.0 36.0 41.0 35.0 41.0 31 37.984658691248725 40.0 35.0 41.0 35.0 41.0 32 37.85774350675108 40.0 35.0 41.0 35.0 41.0 33 37.72183548320561 40.0 35.0 41.0 35.0 41.0 34 37.58031875228077 40.0 35.0 41.0 34.0 41.0 35 37.44662604915354 40.0 35.0 41.0 34.0 41.0 36 37.344087983456824 40.0 35.0 41.0 34.0 41.0 37 37.31763437362823 40.0 35.0 41.0 34.0 41.0 38 37.204926063433135 40.0 35.0 41.0 33.0 41.0 39 37.19755356170107 40.0 35.0 41.0 34.0 41.0 40 37.10498741280192 40.0 35.0 41.0 33.0 41.0 41 37.058936381762315 40.0 35.0 41.0 33.0 41.0 42 37.035918468804375 40.0 35.0 41.0 33.0 41.0 43 36.996443323231844 40.0 35.0 41.0 33.0 41.0 44 36.895112412140826 39.0 35.0 41.0 33.0 41.0 45 36.827784124264205 39.0 35.0 41.0 33.0 41.0 46 36.767433004902664 39.0 35.0 41.0 33.0 41.0 47 36.704198200771096 39.0 35.0 41.0 33.0 41.0 48 36.647015035884095 39.0 35.0 41.0 33.0 41.0 49 36.60521615075021 39.0 35.0 41.0 33.0 41.0 50 36.496555047836644 39.0 35.0 41.0 33.0 41.0 51 36.42872697415393 38.0 35.0 41.0 33.0 41.0 52 36.212426817078395 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 4.0 13 7.0 14 9.0 15 16.0 16 34.0 17 86.0 18 194.0 19 313.0 20 675.0 21 1116.0 22 1770.0 23 2899.0 24 5013.0 25 8162.0 26 11544.0 27 13044.0 28 13053.0 29 12492.0 30 13343.0 31 15603.0 32 19753.0 33 27208.0 34 68523.0 35 265161.0 36 63598.0 37 82726.0 38 160687.0 39 722822.0 40 2791.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.717922477668296 23.232371311765856 29.340732278758843 14.708973931807003 2 30.81397654973265 25.65692745437141 30.497709976147792 13.031386019748151 3 28.920211443772775 25.570192139876564 31.802507919886185 13.707088496464479 4 25.560275754835228 27.858629370481435 31.838867998371068 14.742226876312268 5 23.1515197190622 33.4849879152321 29.115630338320614 14.24786202738509 6 22.482692602641198 41.46800841967199 26.02297428086376 10.026324696823055 7 87.95912862741365 4.065453430011477 6.189344778163855 1.7860731644110197 8 88.09147931309862 3.5345301748985882 6.376962783145848 1.9970277288569447 9 83.00582819003496 5.845047889528826 7.904747171846986 3.244376748589229 10 41.487444534353 32.858669036021595 13.561582073291339 12.092304356334058 11 38.23738239167341 21.892006600345884 24.565464007488856 15.305147000491854 12 36.93245222946779 20.735425558358585 27.217568132176158 15.114554079997461 13 21.92869722499881 35.15133725757744 27.062938634764993 15.857026882658754 14 15.602638551731799 37.37650795161862 29.622820378567916 17.398033118081667 15 15.489657871494227 24.971639138781793 43.7522807685595 15.786422221164475 16 17.649777079664272 21.451190230641895 42.5390441133694 18.359988576324433 17 17.498519153167162 21.515448405709723 31.195823483057527 29.79020895806559 18 19.3741042198846 24.276302219683625 36.392207572416055 19.95738598801572 19 25.801442239040412 24.837106848387727 28.912476663440533 20.448974249131325 20 27.74842527805544 24.032755803068525 29.446176506364996 18.77264241251104 21 21.747161269508837 28.20147185597707 31.073323073180276 18.97804380133382 22 20.80365028744295 23.750998249427493 27.861207630592176 27.58414383253738 23 16.94234217081568 30.40535537679619 28.192745437140697 24.459557015247434 24 17.342369143382992 24.710375447559514 40.15117859541678 17.796076813640717 25 17.521723494163876 26.570953718247736 36.08770844241357 19.81961434517482 26 17.268789566376313 33.231128458174005 28.560378885239658 20.939703090210017 27 16.402031404530334 35.75094800640995 28.366546612298432 19.48047397676128 28 15.413896689778456 29.844947403493745 36.130481116558514 18.610674790169295 29 17.30567851873007 24.239214939629047 35.85440895700784 22.600697584633043 30 18.23702540181192 32.51278552577996 30.858732500885864 18.39145657152226 31 25.093742893257385 29.347607639054164 27.753978453678585 17.80467101400987 32 25.98112713598934 26.227185703481577 29.24421279768988 18.547474362839207 33 25.5257667348914 28.694712847932895 26.733251886757525 19.046268530418182 34 18.90988518148307 27.816782225607017 28.28179457481185 24.991538018098066 35 19.51002480418445 26.698346211412037 32.614990400939284 21.17663858346423 36 26.506100560077428 27.754242890613018 27.467989909086583 18.27166664022297 37 18.688551467360547 34.22038702989724 29.506137581248247 17.584923921493964 38 19.235539266240394 33.24395364949414 26.642616127479755 20.877890956785716 39 19.307201675472417 32.716666402229734 28.504979347475423 19.47115257482243 40 23.65137163437892 27.1985286728968 28.777679936112037 20.372419756612246 41 17.242279763699155 26.4336448400421 30.313661869780677 26.01041352647807 42 18.588990961545584 26.27465213321275 28.181639085894407 26.954717819347263 43 19.246182852851422 26.94797467751916 29.161840692613218 24.6440017770162 44 17.358301468682733 29.32658490276654 31.258164490350698 22.05694913820003 45 18.017079981595188 35.42688054325924 26.749184212057266 19.806855263088305 46 19.735787836958764 33.93016749435427 27.056393820637716 19.277650848049248 47 18.626408787768206 29.234428631115765 29.397189564260817 22.741973016855212 48 19.537922900767395 26.360329699969853 33.28057816491345 20.8211692343493 49 20.17508369428975 26.430471596828873 33.586465588821724 19.807979120059656 50 18.926941363754157 33.12026327341193 29.273102532776957 18.67969283005696 51 17.976290584458514 32.00024063761034 27.633791866977646 22.389676910953508 52 18.73496014935398 27.75179684896949 34.28100919711658 19.23223380455995 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4887.0 1 5083.0 2 5279.0 3 9788.0 4 14297.0 5 9828.0 6 5359.0 7 5499.5 8 5640.0 9 5774.0 10 5908.0 11 5801.0 12 5694.0 13 5762.0 14 5456.0 15 5082.0 16 5307.5 17 5533.0 18 5315.0 19 5097.0 20 5691.5 21 6286.0 22 7424.5 23 8563.0 24 9566.5 25 10570.0 26 13306.5 27 16043.0 28 19729.5 29 23416.0 30 28351.5 31 33287.0 32 36800.0 33 40313.0 34 50106.0 35 59899.0 36 59071.0 37 58243.0 38 68546.5 39 91328.5 40 103807.0 41 118320.0 42 132833.0 43 142250.5 44 151668.0 45 146896.0 46 142124.0 47 134664.0 48 127204.0 49 113220.5 50 99237.0 51 87009.0 52 74781.0 53 67498.5 54 60216.0 55 54999.5 56 49783.0 57 44367.0 58 38951.0 59 36571.5 60 34192.0 61 31511.0 62 28830.0 63 24775.5 64 17556.5 65 14392.0 66 12072.5 67 9753.0 68 8404.5 69 7056.0 70 5993.0 71 4930.0 72 4163.5 73 3397.0 74 2770.5 75 2144.0 76 1763.5 77 1383.0 78 1040.0 79 697.0 80 483.5 81 270.0 82 181.5 83 93.0 84 83.0 85 73.0 86 47.5 87 22.0 88 14.0 89 5.5 90 5.0 91 3.0 92 1.0 93 1.0 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1512648.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.12201864723345 #Duplication Level Percentage of deduplicated Percentage of total 1 76.1444471507666 12.276021968479409 2 8.787284084062074 2.833375157235729 3 2.9992853708985385 1.4506360403400218 4 1.5384945642624968 0.9921455221482909 5 0.9630613515297439 0.776324653389619 6 0.7100356135136022 0.6868324440759682 7 0.4919147873905973 0.5551461562612761 8 0.41245836900151434 0.5319729212999926 9 0.32656357537490477 0.47383776465312966 >10 4.930881368746727 19.07456867899189 >50 1.1354996178821117 12.924740782805513 >100 1.5497589247609627 45.54551567308949 >500 0.007839568575734368 0.7701122202304098 >1k 0.0020630443620353604 0.5783325250654905 >5k 4.126088724070721E-4 0.5304374919337728 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7974 0.5271550287971821 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4211 0.27838598272697945 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.610923360887661E-5 0.0 0.0 0.07814111412569216 0.0 2 6.610923360887661E-5 0.0 0.0 0.22966347755723737 0.0 3 6.610923360887661E-5 0.0 0.0 0.3339838481920447 0.0 4 6.610923360887661E-5 0.0 0.0 0.49158826111560655 0.0 5 6.610923360887661E-5 0.0 0.0 0.8850704195556401 0.0 6 6.610923360887661E-5 0.0 0.0 1.1783309798446169 0.0 7 6.610923360887661E-5 0.0 0.0 1.3852528810404008 0.0 8 6.610923360887661E-5 0.0 0.0 1.8366467281218102 0.0 9 6.610923360887661E-5 0.0 0.0 1.9995398797340822 0.0 10 6.610923360887661E-5 0.0 0.0 2.312633210105722 0.0 11 6.610923360887661E-5 0.0 0.0 2.7365256160058387 0.0 12 6.610923360887661E-5 0.0 0.0 3.0748065643824605 0.0 13 6.610923360887661E-5 0.0 0.0 3.199224142034366 0.0 14 6.610923360887661E-5 0.0 0.0 3.246029479429451 0.0 15 6.610923360887661E-5 0.0 0.0 3.3239722658543163 0.0 16 6.610923360887661E-5 0.0 0.0 3.491955828454472 0.0 17 6.610923360887661E-5 0.0 0.0 3.6847303536579563 0.0 18 6.610923360887661E-5 0.0 0.0 3.936011550605296 0.0 19 6.610923360887661E-5 0.0 0.0 4.073650974978977 0.0 20 6.610923360887661E-5 0.0 0.0 4.23356921107885 0.0 21 6.610923360887661E-5 0.0 0.0 4.430178071831649 0.0 22 6.610923360887661E-5 0.0 0.0 4.628373554191061 0.0 23 6.610923360887661E-5 0.0 0.0 4.863656316605053 0.0 24 6.610923360887661E-5 0.0 0.0 5.043076776619544 0.0 25 6.610923360887661E-5 0.0 0.0 5.193276955378912 0.0 26 6.610923360887661E-5 0.0 0.0 5.328866993510718 0.0 27 6.610923360887661E-5 0.0 0.0 5.477678878364299 0.0 28 6.610923360887661E-5 0.0 0.0 5.627548510955622 0.0 29 6.610923360887661E-5 0.0 0.0 5.796655930527129 0.0 30 6.610923360887661E-5 0.0 0.0 5.98903380032896 0.0 31 6.610923360887661E-5 0.0 0.0 6.178965628487262 0.0 32 6.610923360887661E-5 0.0 0.0 6.344635367911107 0.0 33 6.610923360887661E-5 0.0 0.0 6.519758727741021 0.0 34 6.610923360887661E-5 0.0 0.0 6.698319767718597 0.0 35 6.610923360887661E-5 0.0 0.0 6.915224163189321 0.0 36 6.610923360887661E-5 0.0 0.0 7.098941723388389 0.0 37 6.610923360887661E-5 0.0 0.0 7.288146349976994 0.0 38 6.610923360887661E-5 0.0 0.0 7.467897356159529 0.0 39 6.610923360887661E-5 0.0 0.0 7.657432528916178 0.0 40 6.610923360887661E-5 0.0 0.0 7.867064908689927 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATCGC 20 6.31209E-4 46.0 17 AGATCGA 25 3.4176723E-5 46.0 44 CGAACAG 25 3.4176723E-5 46.0 33 CGTATGA 20 6.31209E-4 46.0 15 AAGCGTA 20 6.31209E-4 46.0 27 TATTCGG 40 5.6134013E-9 46.0 2 GCGATCT 110 0.0 46.0 9 CTCGCGA 20 6.31209E-4 46.0 26 TTACGTA 20 6.31209E-4 46.0 20 TGAATCG 25 3.4176723E-5 46.0 1 TCGACTA 25 3.4176723E-5 46.0 32 TCGAATA 25 3.4176723E-5 46.0 12 CCGTTCG 25 3.4176723E-5 46.0 1 GCGTAAT 25 3.4176723E-5 46.0 9 TACGTAG 25 3.4176723E-5 46.0 1 TCGTTAC 30 1.8617975E-6 45.999996 21 TACGCGG 70 0.0 45.999996 2 TATTACG 35 1.0198528E-7 45.999996 1 ACTCGAT 35 1.0198528E-7 45.999996 18 TTACGAG 70 0.0 45.999996 1 >>END_MODULE