##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528190_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1279552 Sequences flagged as poor quality 0 Sequence length 52 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.765362408092834 31.0 31.0 33.0 28.0 34.0 2 31.520503269894462 31.0 31.0 34.0 30.0 34.0 3 31.796866403241136 31.0 31.0 34.0 30.0 34.0 4 35.59264336267694 37.0 35.0 37.0 33.0 37.0 5 35.241948744560595 37.0 35.0 37.0 33.0 37.0 6 35.364359557094986 37.0 35.0 37.0 33.0 37.0 7 35.323675786525286 37.0 35.0 37.0 32.0 37.0 8 34.20852767218526 35.0 35.0 37.0 30.0 37.0 9 36.934407511378986 39.0 37.0 39.0 33.0 39.0 10 36.99442461111389 39.0 37.0 39.0 33.0 39.0 11 37.56401615565448 39.0 37.0 39.0 35.0 39.0 12 37.653529516580804 39.0 37.0 39.0 35.0 39.0 13 37.34423141849648 39.0 37.0 39.0 35.0 39.0 14 37.12671466263192 40.0 36.0 40.0 31.0 40.0 15 36.214834567098485 38.0 35.0 40.0 31.0 40.0 16 36.55441904666633 38.0 36.0 40.0 31.0 40.0 17 36.3687947031461 38.0 35.0 40.0 30.0 40.0 18 36.58005223703296 38.0 35.0 40.0 31.0 40.0 19 36.76864011779123 39.0 35.0 40.0 31.0 40.0 20 36.89375812784475 39.0 36.0 40.0 31.0 40.0 21 36.96279557220027 39.0 36.0 40.0 31.0 40.0 22 36.98135441154404 39.0 36.0 40.0 31.0 40.0 23 37.00781210923823 39.0 36.0 40.0 31.0 40.0 24 37.02579496573801 39.0 36.0 40.0 31.0 40.0 25 37.00634362651928 39.0 36.0 40.0 31.0 40.0 26 36.64670994222978 39.0 35.0 40.0 31.0 40.0 27 36.12290629845446 38.0 35.0 40.0 30.0 40.0 28 35.845902315810534 38.0 35.0 40.0 30.0 40.0 29 35.648336292702446 37.0 35.0 40.0 30.0 40.0 30 35.3564075551443 37.0 34.0 40.0 29.0 40.0 31 35.30232065597959 37.0 34.0 40.0 29.0 40.0 32 35.227032586405244 37.0 34.0 40.0 28.0 40.0 33 35.05409158830591 37.0 34.0 40.0 27.0 40.0 34 34.90124824938729 37.0 34.0 40.0 26.0 40.0 35 34.58211155154304 37.0 33.0 40.0 24.0 40.0 36 34.353063415945584 36.0 33.0 40.0 24.0 40.0 37 34.06409274496074 36.0 33.0 40.0 22.0 40.0 38 33.6239207160006 35.0 33.0 40.0 21.0 40.0 39 33.09228698794578 35.0 33.0 40.0 18.0 40.0 40 32.487903578752565 35.0 32.0 40.0 15.0 40.0 41 31.821626631821136 35.0 31.0 39.0 10.0 40.0 42 31.18758440454159 35.0 30.0 39.0 9.0 40.0 43 30.630072087730706 35.0 28.0 39.0 9.0 40.0 44 30.078554056419748 35.0 25.0 38.0 8.0 40.0 45 29.808432170009503 35.0 24.0 38.0 8.0 40.0 46 29.463709954734156 35.0 23.0 38.0 8.0 40.0 47 29.107669715650477 35.0 23.0 38.0 8.0 40.0 48 28.73261657205022 35.0 20.0 37.0 8.0 40.0 49 28.312571118641525 34.0 20.0 37.0 8.0 40.0 50 27.976759834692142 34.0 18.0 36.0 8.0 40.0 51 27.64022642299805 33.0 17.0 36.0 8.0 40.0 52 26.686225335117292 33.0 12.0 35.0 8.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 5.0 13 1.0 14 11.0 15 17.0 16 51.0 17 200.0 18 629.0 19 1450.0 20 2856.0 21 4980.0 22 7799.0 23 11611.0 24 16770.0 25 22755.0 26 30295.0 27 38904.0 28 48644.0 29 60432.0 30 66434.0 31 63328.0 32 59548.0 33 66942.0 34 89738.0 35 116391.0 36 154317.0 37 186853.0 38 192120.0 39 36468.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.894444305506926 22.151424873705796 38.18688103336167 7.767249787425599 2 21.3386403991397 21.385062897013952 36.870639098684535 20.405657605161807 3 19.42265730505677 24.343207622667933 37.223965888060825 19.010169184214476 4 19.732531385985094 21.271585679987997 37.23232818986645 21.76355474416046 5 0.0 0.0 100.0 0.0 6 100.0 0.0 0.0 0.0 7 100.0 0.0 0.0 0.0 8 0.0 100.0 0.0 0.0 9 0.0 0.0 100.0 0.0 10 100.0 0.0 0.0 0.0 11 98.91227554644125 0.6866465763017057 0.3110463662281799 0.0900315110288601 12 98.01500837793228 1.309520832291302 0.323316285699995 0.35215450407642673 13 88.45041076876907 7.252147626669335 2.466800880308108 1.8306407242534888 14 33.1487114239984 42.8027934777172 12.896310583704295 11.152184514580103 15 21.569815060271093 50.59770919821938 16.694749412294303 11.137726329215225 16 29.06822075226329 41.04913282148752 17.752463362176762 12.130183064072424 17 17.077539638873606 43.8025183814335 19.106140274095935 20.013801705596958 18 16.95390261591557 45.15705496923923 21.151543665282848 16.737498749562345 19 20.142362326814382 43.66231305957085 23.255795778522483 12.93952883509228 20 17.85140424148452 44.448760191066874 22.96374043415195 14.736095133296653 21 24.597515380383133 43.01661831641074 14.852698444455559 17.533167858750563 22 23.723225003751313 42.80724816185665 18.88911118891612 14.580415645475917 23 21.40374130945831 44.17764967738709 20.314531961186415 14.10407705196819 24 22.45379632871505 45.7950126294203 17.698616390736756 14.052574651127895 25 23.840922447856748 43.67036275196319 18.113683539238735 14.375031260941329 26 22.441448256889913 44.682748336917925 17.504876706847398 15.37092669934477 27 19.330124918721552 49.15079652878507 17.051280448156856 14.467798104336518 28 20.9426424248487 45.407533261641575 17.286440879307758 16.36338343420197 29 24.04357150002501 46.197966163157105 14.22185264842695 15.536609688390937 30 25.38099272245286 46.79637873255639 14.595342744960737 13.227285800030012 31 19.662975791527035 50.70454346521282 15.414535712499374 14.217945030760767 32 20.274596108638026 53.31334717151003 15.101535537438105 11.310521182413845 33 19.990512304306506 53.529985494923224 13.79326514279998 12.68623705797029 34 19.62132058720552 55.45120479667883 12.492419221727605 12.435055394388035 35 19.36490271595058 54.23695168308909 14.346896413744812 12.051249187215525 36 18.60815347871755 53.85916320712249 16.77618416445756 10.756499149702396 37 18.94139511328965 53.24988746061121 16.945852923523233 10.862864502575901 38 17.42352010703746 53.463477842244785 17.982700195068276 11.130301855649478 39 17.809123818336417 53.66120329615366 16.37088606012104 12.158786825388885 40 20.66559233231631 51.75311358975642 14.826361101385485 12.754932976541788 41 21.94346146151153 49.89848009303256 15.602648426949434 12.555410018506477 42 23.73901177912269 49.8025090031511 14.030066773370681 12.428412444355525 43 23.939785174811185 48.36731918671535 14.807526384234482 12.885369254238984 44 21.44172335317361 48.72033336667834 15.613120842294803 14.224822437853248 45 21.548088706047118 46.76457072475366 17.26815322863002 14.4191873405692 46 24.195577827239532 47.491543915370386 14.166677086980442 14.146201170409645 47 24.02903516230681 46.32230655729505 15.37303681288451 14.27562146751363 48 24.10437403091082 46.81239996498775 14.849572350322612 14.233653653778822 49 22.172291552043216 48.03063884859701 14.206378482468866 15.590691116890913 50 20.390261591557046 48.76128519981994 14.84738408442955 16.001069124193467 51 20.50663044565598 47.74819624368529 16.992509878457458 14.75266343220127 52 22.90989346271195 45.0846077377082 16.511247686690343 15.494251112889511 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 1.5 6 3.0 7 19.0 8 35.0 9 729.5 10 1424.0 11 4980.0 12 8536.0 13 14582.5 14 26317.0 15 32005.0 16 25337.5 17 18670.0 18 16527.5 19 14385.0 20 15281.5 21 16178.0 22 19316.0 23 22454.0 24 29097.0 25 35740.0 26 43615.5 27 51491.0 28 58412.0 29 65333.0 30 65463.5 31 65594.0 32 63307.5 33 61021.0 34 58745.5 35 56470.0 36 56093.5 37 55717.0 38 53929.0 39 50194.5 40 48248.0 41 50153.5 42 52059.0 43 52663.5 44 53268.0 45 58656.5 46 64045.0 47 64221.0 48 64397.0 49 67519.0 50 70641.0 51 70704.5 52 70768.0 53 66046.5 54 61325.0 55 57207.5 56 53090.0 57 50077.0 58 47064.0 59 43143.0 60 39222.0 61 33224.5 62 27227.0 63 24902.0 64 18983.0 65 15389.0 66 11950.0 67 8511.0 68 5491.0 69 2471.0 70 1460.0 71 449.0 72 301.0 73 153.0 74 432.0 75 711.0 76 392.0 77 73.0 78 46.5 79 20.0 80 15.0 81 10.0 82 7.5 83 5.0 84 3.0 85 1.0 86 0.5 87 0.0 88 0.5 89 1.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1279552.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.04182643219254 #Duplication Level Percentage of deduplicated Percentage of total 1 87.86058721004146 34.30237796084955 2 5.3485014789509835 4.176305328270589 3 1.6328823696675174 1.9125213018223945 4 0.847565399944669 1.323620049382865 5 0.5636135493823664 1.1002251184909166 6 0.3935457882238287 0.9218847814173075 7 0.3107795092362128 0.849337976079754 8 0.24316262888190807 0.7594810521282483 9 0.20657560047039644 0.7258579864822055 >10 2.220506727777392 18.030821778616676 >50 0.1771543238043997 4.665759449557052 >100 0.14523309777681515 12.731690002025761 >500 0.03312688177365627 9.16476954116548 >1k 0.01676543406837482 9.335347673711244 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCGTGGATGGGATTCGCCAGCACCGCCACCACGATGATGACGCCGCGTACC 3501 0.2736113889861452 No Hit TAGTTGGATGGGGGGTGAAACCCCGTCTCTACTAAAAATACAAAACATTAGC 2692 0.21038613514730153 No Hit GGGATGGATGGGGACCTGCGCCCGCAGCGCTTCGCCGAGCAGATTGGACGAT 2500 0.19538088330915818 No Hit CGATTGGATGGGGGCAGCCTGATACTGCCACATGCTGCACAGTGCCCACCCA 2430 0.18991021857650175 No Hit TTTTTGGATGGGGCAGGCAGGAGGATCTCTTAGTAGCTTAGTAGAGGTCAGC 2331 0.18217313559745912 No Hit ACTGTGGATGGGGGTAGCAAGCAGGGAGGGATCCGCGGCCATCATCAGCGAC 2280 0.17818736557795228 No Hit AGGCTGGATGGGGTACTACTTCATTGCAACTTTCATCGCTGACCACATCAGA 2215 0.17310746261191418 No Hit GACGTGGATGGGGCCTAGGACTAGCCAGCTAGCCTGGCATCACTCATTCCAA 2176 0.1700595208322913 No Hit GGGATGGATGGGGAATCCCAGCCCTTTGGGAGTCCAAGGCAGGTGGATAGCC 2065 0.16138460961336468 No Hit GGTCTGGATGGGGGCGCCCCAGTTCCCCTGACCATCAACCAGCGGATAACGG 1932 0.15099034662131747 No Hit GTACTGGATGGGGGTACCAACTCCACAGCCCACACCTTCTAATAGTGCCACT 1898 0.14833316660831292 No Hit CTTTTGGATGGGGTTCCCAGTCTCTGTTTCTTAGCCCAGGAAAAGAATTCCT 1843 0.14403478717551144 No Hit TAAGTGGATGGGGTTACCCTACTCCACTATGCCCTCATCTTAACTAATTATA 1741 0.13606324713649778 No Hit TTTGTGGATGGGAGCACACAAGTGTTCATAGTAGTTTCACTTGTAGTAGCCA 1741 0.13606324713649778 No Hit GTGGTGGATGGGGAACTGCCAACGTCACTGAGGGCCCTGCTCTGAAGCCCTG 1722 0.13457835242334817 No Hit TGATTGGATGGGGGAGGCCAAGATGTTCAGATCGCTTGAGCTCAGGAGTTTG 1708 0.13348421947681688 No Hit GTCTTGGATGGGGGGGCTGGAGAGATGGCTCAGTGGGTAAGAGCACCCGACT 1695 0.13246823888360926 No Hit CGTTTGGATGGGGAGTTCCTAAGGGCGCATGGTGGATGCCTTGGCAACAGGA 1690 0.13207747711699094 No Hit ATGCTGGATGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTG 1645 0.1285606212174261 No Hit AGTGTGGATGGGGTCAAACTCTCAATTAACCATGGAAGACATGCACTGCATT 1608 0.12566898414445055 No Hit TTTCTGGATGGGGTTGATGAACTTGGAGTTCCCGTGTTCCTTTAATTAGCCT 1601 0.1251219176711849 No Hit TTCGTGGATGGGGTGACCAATGGAAAGAACTTAGTGCTGGTGTGTACCACTG 1596 0.1247311559045666 No Hit TGGGTGGATGGGAGTTTCTGATATTCCCTGACACAATTAAGGAATGCCTTTA 1586 0.12394963237132997 No Hit TAACTGGATGGGGGCTTTCCGGCGGTGACGACCTCCCTACGAGAACATGCCT 1582 0.1236370229580353 No Hit ATGCTGGATGGGGGCTCCGCCAGATCGCCGCCATCATGGACACGAGTCGCGT 1557 0.12168321412494372 No Hit TCCATGGATGGGGGTTCAAGAGATTCTCGTGCCTCAGCCTCCCAAGTAGCTG 1555 0.12152690941829641 No Hit TATTTGGATGGGGGGAGTCACCCCTCAAGGATGGCCTCTGGGGTTTCTGCTC 1554 0.12144875706497274 No Hit TCTGTGGATGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1547 0.1209016905917071 No Hit ACTCTGGATGGGGTCACAGGGGCATGTGTTCCACTATGTTCATAATGGCCTT 1518 0.11863527234532087 No Hit TAGATGGATGTGGGGCCAATATGGTGAAAACCAGACTCTACAAAAAGCACAA 1471 0.11496211173910868 No Hit GCTATGGATGGGGCTGGTGTTCGGGTTGTCATGCCAATGGCACTGCCCGGTA 1445 0.11293015055269344 No Hit CAAGTGGATGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAACACCGACTG 1391 0.10870992347321562 No Hit CTTCTGGATGGGGGTCAAGAAAGTCAATGAGGAAATTAAATGTAAATTCTGA 1388 0.10847546641324464 No Hit TATCTGGATGGGGACAGCAAGTTGTTGTTCTAGAACTTTGAACACTAAATGG 1383 0.10808470464662631 No Hit TGTCTGGATGGGCTCTTCGGTTCTCATCGCTGTGCGGACGCCAGAGCCGAGC 1371 0.10714687640674236 No Hit ATGGTGGATGGGGCAGATGCCCGCCACGCAGCGCGTTCTGTTTCTCTGGCGC 1356 0.10597459110688742 No Hit TAATTGGATGGGGGAGCCTCAGGGCTCCAGATCGGTTAGCTGCATCCCACCT 1352 0.10566198169359275 No Hit CTGTTGGATGGGGAGGCTGGCCTTGAACTCAGAAATCCACCTGCCTCTGCTT 1315 0.10277034462061721 No Hit GTAATGGATGGGGGCCTTTTGTGACTGGCGGTGAACGAGTGCGCAGTGCCAT 1307 0.10214512579402792 No Hit GATATGGATGGGAGGAGGGGGAGGAGAAGCTTAGATACTATGGTTTCTAAAT 1299 0.10151990696743861 No Hit CCTGTGGATGGGGGAGTGCTGCCTTTGCTCCGCACCATGAACCACACTTCTC 1296 0.10128544990746763 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.023914620117040965 0.0 0.0 0.0 0.0 12 0.09245423398189366 0.0 0.0 0.0 0.0 13 0.2260166058120342 0.0 0.0 0.0 0.0 14 0.7562021707597659 0.0 0.0 0.0 0.0 15 1.2212086730355625 0.0 0.0 0.0 0.0 16 1.4391755864552593 0.0 0.0 0.0 0.0 17 1.5793027559645876 0.0 0.0 0.0 0.0 18 1.7685877557145 0.0 0.0 0.0 0.0 19 1.9369279247736708 0.0 0.0 0.0 0.0 20 2.110113539738909 0.0 0.0 0.0 0.0 21 2.2940060271094884 0.0 0.0 0.0 0.0 22 2.488136472765468 0.0 0.0 0.0 0.0 23 2.6788282148752063 0.0 0.0 0.0 0.0 24 2.8909337017956283 0.0 0.0 0.0 0.0 25 3.1232024958735556 0.0 0.0 0.0 0.0 26 3.3655529435302354 0.0 0.0 0.0 0.0 27 3.6025890311609063 0.0 0.0 0.0 0.0 28 3.8432982793977892 0.0 0.0 0.0 0.0 29 4.108938128344921 0.0 0.0 0.0 0.0 30 4.422719826939429 0.0 0.0 0.0 0.0 31 4.6875 0.0 0.0 0.0 0.0 32 4.912969539338769 0.0 0.0 0.0 0.0 33 5.103973890861802 0.0 0.0 0.0 0.0 34 5.289351272945531 0.0 0.0 0.0 0.0 35 5.453471214925224 0.0 0.0 0.0 0.0 36 5.61212049217226 0.0 0.0 0.0 0.0 37 5.7612351823138095 0.0 0.0 0.0 0.0 38 5.921056744860701 0.0 0.0 0.0 0.0 39 6.089553218626519 0.0 0.0 0.0 0.0 40 6.264380033011554 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGAGAT 115 0.0 46.000004 42 AGATACT 115 0.0 46.000004 33 TTAGCAA 115 0.0 46.000004 30 CGGCATT 145 0.0 46.000004 44 TTAGAGA 115 0.0 46.000004 41 ATACTAT 115 0.0 46.000004 35 TATTGGT 115 0.0 46.000004 23 GCATTTA 145 0.0 46.000004 46 CTAACAC 115 0.0 46.000004 43 CCGTACA 115 0.0 46.000004 27 CGCTCCG 115 0.0 46.000004 23 CACTACA 145 0.0 46.000004 35 TCTAACA 115 0.0 46.000004 42 ACTACAC 145 0.0 46.000004 36 TTGGTCA 115 0.0 46.000004 25 ACTGTCG 115 0.0 46.000004 27 TCCGTAC 115 0.0 46.000004 26 CGTACAG 115 0.0 46.000004 28 ATTGGTC 115 0.0 46.000004 24 GCGGCAT 145 0.0 46.000004 43 >>END_MODULE