##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528189_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1149368 Sequences flagged as poor quality 0 Sequence length 59 %GC 40 >>END_MODULE >>Per base sequence quality warn #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.345685628971747 31.0 30.0 31.0 27.0 33.0 2 31.152934482254597 31.0 31.0 34.0 30.0 34.0 3 31.481138329934364 31.0 31.0 34.0 30.0 34.0 4 35.34543244635313 35.0 35.0 37.0 33.0 37.0 5 34.829428868734816 35.0 35.0 37.0 32.0 37.0 6 35.00903453028099 35.0 35.0 37.0 32.0 37.0 7 34.84029484029484 37.0 35.0 37.0 32.0 37.0 8 33.58611950219599 35.0 33.0 36.0 28.0 37.0 9 36.43079849099679 37.0 35.0 39.0 32.0 39.0 10 36.54315415080288 38.0 35.0 39.0 32.0 39.0 11 37.12696281782684 39.0 37.0 39.0 34.0 39.0 12 37.25777035727461 39.0 37.0 39.0 35.0 39.0 13 36.8768862540109 39.0 37.0 39.0 33.0 39.0 14 35.97092315080984 38.0 35.0 40.0 27.0 40.0 15 34.99229663606434 37.0 33.0 40.0 27.0 40.0 16 35.27866705876621 38.0 34.0 40.0 27.0 40.0 17 35.209420307508125 38.0 33.0 40.0 26.0 40.0 18 35.74566631400909 38.0 34.0 40.0 29.0 40.0 19 36.08816236401222 38.0 34.0 40.0 30.0 40.0 20 36.145244168969384 38.0 35.0 40.0 30.0 40.0 21 36.15825653750583 38.0 35.0 40.0 30.0 40.0 22 36.074833299691655 38.0 35.0 40.0 30.0 40.0 23 35.956191576588175 38.0 34.0 40.0 30.0 40.0 24 35.94655323621329 38.0 34.0 40.0 29.0 40.0 25 35.87872378559347 38.0 34.0 40.0 29.0 40.0 26 35.441593989044414 38.0 34.0 40.0 27.0 40.0 27 34.877213390315376 37.0 33.0 40.0 25.0 40.0 28 34.617787340521055 37.0 33.0 39.0 25.0 40.0 29 34.384091083099584 36.0 33.0 40.0 26.0 40.0 30 34.15002331716213 35.0 33.0 40.0 25.0 40.0 31 34.022089530942225 35.0 33.0 40.0 25.0 40.0 32 33.803860034384115 35.0 33.0 39.0 24.0 40.0 33 33.35705187546547 35.0 32.0 39.0 21.0 40.0 34 33.169777651718164 35.0 32.0 39.0 21.0 40.0 35 33.0648608626654 35.0 32.0 39.0 21.0 40.0 36 32.64720872688295 35.0 31.0 39.0 18.0 40.0 37 32.491747638702314 35.0 31.0 39.0 18.0 40.0 38 32.15478506448761 35.0 31.0 39.0 16.0 40.0 39 31.56872820541376 35.0 30.0 39.0 15.0 40.0 40 31.054756179047963 35.0 29.0 38.0 11.0 40.0 41 30.384753186098795 35.0 26.0 38.0 10.0 40.0 42 29.798325688552318 34.0 24.0 38.0 9.0 40.0 43 29.235063965588044 34.0 23.0 37.0 8.0 40.0 44 28.731421094027326 34.0 22.0 37.0 8.0 40.0 45 28.515922663585552 33.0 21.0 37.0 8.0 40.0 46 28.149525652358513 33.0 20.0 37.0 8.0 40.0 47 27.67772462779545 33.0 18.0 36.0 8.0 40.0 48 27.297117198321164 33.0 18.0 35.0 8.0 40.0 49 26.9252006319995 33.0 15.0 35.0 8.0 39.0 50 26.409987053754758 33.0 13.0 35.0 8.0 39.0 51 26.080841819156266 32.0 12.0 35.0 8.0 39.0 52 25.48155421066186 31.0 10.0 35.0 8.0 39.0 53 25.25522635048131 31.0 10.0 35.0 8.0 38.0 54 24.98893478850986 31.0 10.0 35.0 8.0 38.0 55 24.694234570651002 30.0 10.0 35.0 8.0 38.0 56 24.200854730599772 30.0 10.0 35.0 8.0 38.0 57 23.660529090769884 28.0 9.0 35.0 8.0 37.0 58 23.2303317997369 27.0 9.0 35.0 8.0 37.0 59 22.420318818689925 26.0 9.0 34.0 8.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 1.0 13 4.0 14 27.0 15 96.0 16 321.0 17 1036.0 18 2562.0 19 5112.0 20 8896.0 21 13915.0 22 20213.0 23 28065.0 24 36244.0 25 45819.0 26 55327.0 27 62723.0 28 59805.0 29 52653.0 30 53593.0 31 61241.0 32 70118.0 33 81909.0 34 95974.0 35 99603.0 36 113053.0 37 97034.0 38 75697.0 39 8325.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.80304306366629 22.820193358436985 37.52740636593328 7.849357211963444 2 20.700245700245702 22.264322653841067 36.05973021695401 20.97570142895922 3 19.78469906940162 24.47492883045291 37.02486931948688 18.71550278065859 4 19.478443805639273 21.706276840837745 36.81623292104879 21.999046432474195 5 0.0 0.0 100.0 0.0 6 100.0 0.0 0.0 0.0 7 100.0 0.0 0.0 0.0 8 0.0 100.0 0.0 0.0 9 0.0 0.0 100.0 0.0 10 100.0 0.0 0.0 0.0 11 98.85458791266156 0.6954256600148951 0.35201954465410557 0.09796688266943225 12 98.00838373784549 1.3176806732047526 0.3080823548245645 0.3658532341251888 13 88.61791871706886 7.218749782489159 2.361558700085612 1.8017728003563698 14 33.26436789609594 42.98597142081561 12.604666216564233 11.144994466524212 15 21.707668910218487 50.572401528492186 16.636969186544256 11.082960374745078 16 28.894401096950673 41.05621524176765 17.912713769654278 12.136669891627399 17 17.01152285429906 43.81921194952356 18.8677603691768 20.301504827000578 18 16.83812321206089 45.314555477445 21.125000870043362 16.72232044045075 19 20.14742014742015 43.79250161828065 23.11470303679935 12.945375197499843 20 17.585751473853456 44.41353857076237 23.283491449213827 14.717218506170349 21 24.60230317879043 42.93881507054312 14.890966165753703 17.567915584912754 22 23.593574903773202 42.84250127026331 18.886292292807873 14.677631533155614 23 21.199215568903952 44.26641423808563 20.567303074385226 13.967067118625193 24 22.03384816699264 46.20391380306395 17.75184275184275 14.01039527810066 25 23.74861663105289 43.818254901824304 18.217228946690703 14.2158995204321 26 22.240831483041116 45.01064933076265 17.402085319932343 15.346433866263895 27 19.176538758691734 49.650503581098484 17.030663808284206 14.14229385192558 28 20.770197186627783 45.82413987513137 17.067640651210056 16.338022287030785 29 23.683711396175987 46.7299420203103 14.078606677756818 15.507739905756903 30 25.2646671910128 47.30939090004246 14.298814652922301 13.127127256022439 31 19.52560015591177 51.28940426390851 15.082636718614056 14.102358861565662 32 20.19379345866598 53.87743525137293 14.823624809460503 11.105146480500588 33 19.875270583485882 54.12600664017094 13.583726012904481 12.41499676343869 34 19.332450529334384 56.18339818056533 12.32346820165517 12.160683088445127 35 19.31339657968553 54.90939368418122 14.130461262189309 11.64674847394394 36 18.27700092572614 54.45557906606066 16.6830814847812 10.584338523432008 37 18.592913670817353 54.21205392876781 16.651324902033117 10.54370749838172 38 17.16351942980838 54.41077183286816 17.59514794217344 10.830560795150031 39 17.39294986462125 54.711110801762366 16.053866124687655 11.842073208928733 40 20.108442204759484 53.009131975137635 14.404698930194682 12.477726889908194 41 21.370179089725834 51.00516109722909 15.363051694496455 12.261608118548628 42 23.222066387788768 51.17908276548503 13.52639015528534 12.072460691440861 43 23.333866959929285 49.65285269817848 14.401305761079133 12.611974580813106 44 20.7474020505182 50.06264312213321 15.16824898552944 14.021705841819157 45 20.930546178421533 47.844554572599904 16.873707985606 14.351191263372568 46 23.705723493258905 48.31672710567895 13.701007858231653 14.276541542830495 47 23.425569530385395 47.04124353557781 15.18860800022273 14.344578933814061 48 23.740612232113648 47.418929359439275 14.551040223844755 14.28941818460232 49 21.76839793695318 48.68510346555672 13.928872214991195 15.617626382498903 50 19.737977740810603 49.423248254693014 14.691204209617808 16.147569794878578 51 19.929648293670958 48.46254637331124 16.86274543923269 14.745059893785106 52 21.044434854633153 47.07839438717626 16.412062977218785 15.465107780971804 53 18.739167960131134 47.96670866075966 16.214911151171773 17.07921222793744 54 18.03312777108811 47.71143793806683 17.105313528826276 17.150120762018776 55 18.87315463802716 45.782029776364055 16.428593801115046 18.91622178449374 56 21.024510861621344 43.32859449714974 18.544017233818934 17.102877407409984 57 19.44599118820082 41.93722115110217 19.018886901323164 19.59790075937385 58 21.08349980163011 40.79476721119781 18.102470227116118 20.019262760055963 59 21.678087435877806 38.20360406762673 20.641343764573225 19.476964731922237 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.5 5 1.0 6 17.0 7 33.0 8 537.5 9 3555.0 10 6068.0 11 10590.5 12 15113.0 13 19208.5 14 18024.0 15 12744.0 16 10393.5 17 8043.0 18 7442.5 19 7187.5 20 7533.0 21 9505.5 22 11478.0 23 14504.0 24 17530.0 25 23246.5 26 33308.0 27 37653.0 28 42449.0 29 47245.0 30 51680.0 31 59844.0 32 63573.0 33 64021.5 34 64470.0 35 59925.5 36 56239.5 37 57098.0 38 51081.0 39 45064.0 40 49369.5 41 53675.0 42 48750.0 43 44406.5 44 44988.0 45 47477.0 46 49966.0 47 47693.0 48 45476.5 49 45533.0 50 45944.5 51 46356.0 52 45889.0 53 44252.5 54 43083.0 55 38818.0 56 34553.0 57 34169.5 58 31655.0 59 29524.0 60 26515.5 61 23507.0 62 19309.0 63 15111.0 64 13805.5 65 9624.5 66 6749.0 67 5708.5 68 4668.0 69 4130.0 70 2237.5 71 883.0 72 551.5 73 220.0 74 418.0 75 336.5 76 57.0 77 40.0 78 23.0 79 16.0 80 9.0 81 8.0 82 3.5 83 0.0 84 0.0 85 0.0 86 1.0 87 1.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 1149368.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.526875023376945 #Duplication Level Percentage of deduplicated Percentage of total 1 92.61007685686936 50.49738086679848 2 3.512049751653507 3.8300219576858563 3 1.0932122700870788 1.7882834647518098 4 0.5688238716511542 1.2406475263934356 5 0.33108743411355546 0.9026581570860193 6 0.23268538074139697 0.7612564005271819 7 0.17802437606354754 0.6794979033312201 8 0.14335321060573994 0.6253282079119212 9 0.12298010625869579 0.603514879589657 >10 1.018067745365392 11.045379306251437 >50 0.06858544151685214 2.5431364185257745 >100 0.0909511421752127 11.219299188649376 >500 0.022697541276551755 8.554628882785252 >1k 0.007404871622137453 5.7089668397126605 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCGTGGATGGGATTCGCCAGCACCGCCACCACGATGATGACGCCGCGTACCACCTGCT 2923 0.25431367499356167 No Hit TAGTTGGATGGGGGGTGAAACCCCGTCTCTACTAAAAATACAAAACATTAGCCAGGTGT 2218 0.19297561790479636 No Hit GGGATGGATGGGGACCTGCGCCCGCAGCGCTTCGCCGAGCAGATTGGACGATCCCAGCC 2044 0.17783686338927132 No Hit GACGTGGATGGGGCCTAGGACTAGCCAGCTAGCCTGGCATCACTCATTCCAACAGGGCC 2004 0.17435668993742648 No Hit ACTGTGGATGGGGGTAGCAAGCAGGGAGGGATCCGCGGCCATCATCAGCGACACCATCA 1979 0.17218158153002344 No Hit CGATTGGATGGGGGCAGCCTGATACTGCCACATGCTGCACAGTGCCCACCCATCAGAAG 1869 0.16261110453745015 No Hit GGGATGGATGGGGAATCCCAGCCCTTTGGGAGTCCAAGGCAGGTGGATAGCCTGAGGTC 1791 0.1558247663063527 No Hit AGGCTGGATGGGGTACTACTTCATTGCAACTTTCATCGCTGACCACATCAGACACCATG 1677 0.14590627196859493 No Hit TTTTTGGATGGGGCAGGCAGGAGGATCTCTTAGTAGCTTAGTAGAGGTCAGCCTGGTCT 1662 0.1446012069241531 No Hit CGTTTGGATGGGGAGTTCCTAAGGGCGCATGGTGGATGCCTTGGCAACAGGAGCCGATG 1659 0.14434019391526473 No Hit GGTCTGGATGGGGGCGCCCCAGTTCCCCTGACCATCAACCAGCGGATAACGGTAAGAGA 1642 0.14286112019823066 No Hit TAAGTGGATGGGGTTACCCTACTCCACTATGCCCTCATCTTAACTAATTATATCTGCAA 1581 0.1375538556841673 No Hit GTGGTGGATGGGGAACTGCCAACGTCACTGAGGGCCCTGCTCTGAAGCCCTGGGCCCTG 1542 0.1341606865686186 No Hit TAGATGGATGTGGGGCCAATATGGTGAAAACCAGACTCTACAAAAAGCACAAAAATTCG 1520 0.13224659117010393 No Hit CTTTTGGATGGGGTTCCCAGTCTCTGTTTCTTAGCCCAGGAAAAGAATTCCTAGGCTCT 1499 0.1304195001078854 No Hit TTTGTGGATGGGAGCACACAAGTGTTCATAGTAGTTTCACTTGTAGTAGCCAAAAACAG 1448 0.1259822789567832 No Hit ATGCTGGATGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCT 1433 0.12467721391234139 No Hit AGTGTGGATGGGGTCAAACTCTCAATTAACCATGGAAGACATGCACTGCATTATATACT 1416 0.12319814019530734 No Hit ACTCTGGATGGGGTCACAGGGGCATGTGTTCCACTATGTTCATAATGGCCTTATTTGTG 1385 0.1205010057701276 No Hit TGGGTGGATGGGAGTTTCTGATATTCCCTGACACAATTAAGGAATGCCTTTAGGCCCTA 1367 0.11893492771679741 No Hit GTACTGGATGGGGGTACCAACTCCACAGCCCACACCTTCTAATAGTGCCACTTCCTGAG 1363 0.11858691037161292 No Hit TGATTGGATGGGGGAGGCCAAGATGTTCAGATCGCTTGAGCTCAGGAGTTTGAGACCAG 1340 0.11658581063680215 No Hit TAACTGGATGGGGGCTTTCCGGCGGTGACGACCTCCCTACGAGAACATGCCTCTCGCAA 1334 0.11606378461902542 No Hit ATGCTGGATGGGGGCTCCGCCAGATCGCCGCCATCATGGACACGAGTCGCGTGCAGCCC 1307 0.11371466753903016 No Hit GTCTTGGATGGGGGGGCTGGAGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC 1305 0.1135406588664379 No Hit GCTATGGATGGGGCTGGTGTTCGGGTTGTCATGCCAATGGCACTGCCCGGTAGCTAAGT 1280 0.11136555045903487 No Hit TATTTGGATGGGGGGAGTCACCCCTCAAGGATGGCCTCTGGGGTTTCTGCTCATGCCCC 1261 0.10971246806940858 No Hit TCCATGGATGGGGGTTCAAGAGATTCTCGTGCCTCAGCCTCCCAAGTAGCTGGGACTAC 1224 0.10649330762645211 No Hit TTCGTGGATGGGGTGACCAATGGAAAGAACTTAGTGCTGGTGTGTACCACTGATATACT 1205 0.10484022523682579 No Hit TTTCTGGATGGGGTTGATGAACTTGGAGTTCCCGTGTTCCTTTAATTAGCCTATGATTT 1189 0.10344815585608787 No Hit CTTCTGGATGGGGGTCAAGAAAGTCAATGAGGAAATTAAATGTAAATTCTGAGCAGCCA 1188 0.10336115151979175 No Hit CAAGTGGATGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAACACCGACTGCTCTTCC 1185 0.10310013851090338 No Hit TCTGTGGATGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1172 0.1019690821390538 No Hit TATCTGGATGGGGACAGCAAGTTGTTGTTCTAGAACTTTGAACACTAAATGGAAGAAAA 1157 0.100664017094612 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.022360114428103095 0.0 0.0 0.0 0.0 12 0.08056601541020804 0.0 0.0 0.0 0.0 13 0.19567275232997614 0.0 0.0 0.0 0.0 14 0.6506184268223928 0.0 0.0 0.0 0.0 15 1.0587557683874964 0.0 0.0 0.0 0.0 16 1.245380069742676 0.0 0.0 0.0 0.0 17 1.366925127548357 0.0 0.0 0.0 0.0 18 1.5451100082828129 0.0 0.0 0.0 0.0 19 1.6886671631714125 0.0 0.0 0.0 0.0 20 1.8364005262022258 0.0 0.0 0.0 0.0 21 1.9949224269337584 0.0 0.0 0.0 0.0 22 2.1550104057186212 0.0 0.0 0.0 0.0 23 2.3210146793716198 0.0 0.0 0.0 0.0 24 2.5011136555045903 0.0 0.0 0.0 0.0 25 2.6893040349131 0.0 0.0 0.0 0.0 26 2.8978534290149023 0.0 0.0 0.0 0.0 27 3.0896979905478488 0.0 0.0 0.0 0.0 28 3.2764092962393248 0.0 0.0 0.0 0.0 29 3.5072318004329337 0.0 0.0 0.0 0.0 30 3.76772278330352 0.0 0.0 0.0 0.0 31 3.9834935373179 0.0 0.0 0.0 0.0 32 4.163592513450871 0.0 0.0 0.0 0.0 33 4.309063763737985 0.0 0.0 0.0 0.0 34 4.460277300220643 0.0 0.0 0.0 0.0 35 4.591305830682601 0.0 0.0 0.0 0.0 36 4.719898239728268 0.0 0.0 0.0 0.0 37 4.84814263142875 0.0 0.0 0.0 0.0 38 4.977953101182563 0.0 0.0 0.0 0.0 39 5.115767969875619 0.0 0.0 0.0 0.0 40 5.252712795205713 0.0 0.0 0.0 0.0 41 5.396356954430609 0.0 0.0 0.0 0.0 42 5.542959261089573 0.0 0.0 0.0 0.0 43 5.691997689164828 0.0 0.0 0.0 0.0 44 5.837729952460831 0.0 0.0 0.0 0.0 45 5.97276068239241 0.0 0.0 0.0 0.0 46 6.105442295243995 0.0 0.0 0.0 0.0 47 6.235687786679288 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTAACG 75 0.0 53.000004 49 TTGGCTT 75 0.0 53.000004 39 TCTGATA 175 0.0 53.000004 17 GTTTCAC 150 0.0 53.000004 34 TCCTCAG 75 0.0 53.000004 52 CGACACG 75 0.0 53.000004 48 TAACGAA 75 0.0 53.000004 51 GCGCACT 155 0.0 53.000004 32 CATTAGC 310 0.0 53.000004 46 CACTACA 155 0.0 53.000004 35 TCTAAAT 135 0.0 53.000004 46 ACTACAC 155 0.0 53.000004 36 TTAACGA 75 0.0 53.000004 50 ACGTCAC 150 0.0 53.000004 22 CGCACTA 155 0.0 53.000004 33 TTTGAGG 75 0.0 53.000004 28 CGCAATT 155 0.0 53.000004 20 GCTAACT 150 0.0 53.000004 38 TATACAA 75 0.0 53.000004 41 ATTTGAC 75 0.0 53.000004 15 >>END_MODULE