##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528187_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 825053 Sequences flagged as poor quality 0 Sequence length 52 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.906198753292212 31.0 31.0 33.0 28.0 34.0 2 31.64175149960063 31.0 31.0 34.0 30.0 34.0 3 31.798084486693583 31.0 31.0 34.0 30.0 34.0 4 35.37691639203784 37.0 35.0 37.0 33.0 37.0 5 35.234550992481694 37.0 35.0 37.0 33.0 37.0 6 35.60471751511721 37.0 35.0 37.0 33.0 37.0 7 35.532219142285406 37.0 35.0 37.0 33.0 37.0 8 35.51980781840682 37.0 35.0 37.0 33.0 37.0 9 37.4052382089393 39.0 37.0 39.0 34.0 39.0 10 36.9191712532407 39.0 37.0 39.0 33.0 39.0 11 37.63816869946537 39.0 37.0 39.0 35.0 39.0 12 37.64858499999394 39.0 37.0 39.0 35.0 39.0 13 37.5308058997422 39.0 37.0 39.0 35.0 39.0 14 37.64014433012182 40.0 37.0 40.0 32.0 40.0 15 36.832980426711984 39.0 36.0 40.0 31.0 40.0 16 36.51668559474361 38.0 35.0 40.0 31.0 40.0 17 36.25811917537419 38.0 35.0 40.0 31.0 40.0 18 36.21293298733536 38.0 35.0 40.0 30.0 40.0 19 36.59507086211431 39.0 35.0 40.0 31.0 40.0 20 36.804837992225956 39.0 35.0 40.0 32.0 40.0 21 36.93735917571356 39.0 35.0 40.0 32.0 40.0 22 36.88241482668386 39.0 35.0 40.0 32.0 40.0 23 36.88703998409799 39.0 35.0 40.0 32.0 40.0 24 36.983904064344955 39.0 35.0 40.0 32.0 40.0 25 37.05406804168944 39.0 35.0 40.0 32.0 40.0 26 36.719182888856835 39.0 35.0 40.0 31.0 40.0 27 36.484048903524986 39.0 35.0 40.0 31.0 40.0 28 36.409303402326884 39.0 35.0 40.0 30.0 40.0 29 36.29397505372382 38.0 35.0 40.0 30.0 40.0 30 36.041137963258116 38.0 35.0 40.0 30.0 40.0 31 36.01285493174378 38.0 35.0 40.0 30.0 40.0 32 36.06407103543651 38.0 35.0 40.0 30.0 40.0 33 36.00455364685663 38.0 35.0 40.0 30.0 40.0 34 35.81039642301767 38.0 35.0 40.0 30.0 40.0 35 35.53955685271128 38.0 35.0 40.0 29.0 40.0 36 35.37562920200278 38.0 35.0 40.0 29.0 40.0 37 35.15922492252013 37.0 34.0 40.0 27.0 40.0 38 34.89433042483331 37.0 34.0 40.0 26.0 40.0 39 34.46528404841871 36.0 33.0 40.0 24.0 40.0 40 33.9375361340423 35.0 33.0 40.0 23.0 40.0 41 33.43562292361824 35.0 33.0 40.0 21.0 40.0 42 32.95604524800225 35.0 33.0 40.0 18.0 40.0 43 32.48346954680487 35.0 33.0 39.0 15.0 40.0 44 31.870344086985927 35.0 31.0 39.0 11.0 40.0 45 31.464044128074196 35.0 31.0 39.0 10.0 40.0 46 30.97303203551772 35.0 29.0 39.0 9.0 40.0 47 30.535281975824585 35.0 27.0 38.0 9.0 40.0 48 30.10528172129548 35.0 24.0 38.0 8.0 40.0 49 29.61236066046666 35.0 23.0 38.0 8.0 40.0 50 29.18401969328031 35.0 22.0 38.0 8.0 40.0 51 28.682354951742493 35.0 20.0 38.0 8.0 40.0 52 27.491356312867172 33.0 15.0 36.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 2.0 14 2.0 15 19.0 16 55.0 17 198.0 18 432.0 19 838.0 20 1582.0 21 2487.0 22 3800.0 23 5442.0 24 7430.0 25 10044.0 26 13584.0 27 18035.0 28 23365.0 29 29933.0 30 36498.0 31 40219.0 32 41064.0 33 45840.0 34 58763.0 35 78553.0 36 90738.0 37 127217.0 38 152852.0 39 36060.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.08387097556157 20.569830059402243 38.52128287516074 6.825016089875438 2 28.01759402123258 20.944593862454898 33.92885063141398 17.108961484898547 3 24.336860783489062 23.58224259532418 34.553901385729155 17.5269952354576 4 25.3044349878129 22.031069519170284 33.471304267725834 19.19319122529098 5 0.0 0.0 100.0 0.0 6 0.0 0.0 100.0 0.0 7 0.0 0.0 0.0 100.0 8 0.0 100.0 0.0 0.0 9 0.0 0.0 100.0 0.0 10 0.0 100.0 0.0 0.0 11 99.49833525846218 0.38179365446825836 0.09853912415323622 0.021331962916321737 12 98.61499806679086 1.1126557930217817 0.18035205011072017 0.0919940900766375 13 95.41011304728302 2.6119534139018947 1.0799306226387881 0.8980029161762942 14 51.53087135008296 27.10613742389883 12.684518449117816 8.678472776900394 15 33.126841548361135 31.57663810688525 23.704416564754023 11.592103779999588 16 37.891747560459756 25.00239378561135 22.09700467727528 15.008853976653622 17 25.33461486716611 29.035468024478426 20.977803850176898 24.652113258178566 18 19.10580289993491 39.02015991699927 24.010942327341393 17.86309485572442 19 19.58225713984435 39.33323071366324 27.336062046923047 13.748450099569363 20 15.035640134633773 39.22414681238659 29.351205316506938 16.38900773647269 21 22.07797559671924 37.56473826529932 18.065990912098982 22.29129522588246 22 22.434922362563377 38.3724439520855 20.87659823065912 18.316035454692 23 16.93963902925024 39.857075848460646 26.687012834327007 16.516272287962106 24 17.143383515968065 39.948463916863524 19.775456849438765 23.13269571772965 25 21.606733143204135 41.34958602659465 20.32354285118653 16.72013797901468 26 16.60014568761037 40.32104604189064 22.365472278750577 20.71333599174841 27 17.75958635384636 46.71857444309639 17.962361205886168 17.55947799717109 28 16.212291816404523 46.52840484187076 17.275011423508552 19.98429191821616 29 16.48463795659188 50.48305987615341 17.14568639832835 15.88661576892636 30 20.308513513677305 52.44572166878976 15.762260121470984 11.48350469606195 31 18.592017724921913 52.566077573198335 14.830804808903187 14.011099892976572 32 17.20410688767873 55.53037198822379 15.70614251448089 11.559378609616594 33 17.76819186161374 53.61085893875909 15.880191939184513 12.740757260442662 34 16.27846938317902 54.30584459422607 16.205261964988914 13.210424057605996 35 17.284586565953944 54.410686343786395 16.21726119412935 12.08746589613031 36 15.458400854248152 53.83642020573224 19.37742181411376 11.327757125905851 37 16.054726181227146 53.80902802607832 18.015448704507467 12.12079708818706 38 14.832501669589712 55.10445995590586 18.003570679701788 12.059467694802636 39 16.219927689493886 51.76564414649726 21.0839788474195 10.930449316589359 40 16.521484074356437 50.720377963597485 20.05495404537648 12.703183916669596 41 15.632813891956033 52.53929141521817 19.934719345302664 11.893175347523128 42 16.02648557122997 49.33295194369332 18.92835975385824 15.71220273121848 43 16.31895163098613 50.75637565101878 17.512208306617875 15.412464411377208 44 18.236161798090546 51.16071331175088 17.91739439769324 12.685730492465334 45 17.82127936023504 48.32331983521059 19.942840035731038 13.912560768823337 46 20.970895203096042 47.841290195902566 17.828915233324405 13.358899367676985 47 21.626731858438188 47.817412941956455 16.40040094393936 14.155454255666001 48 21.612672155606973 45.91608054270453 17.99351071991739 14.477736581771111 49 21.81144726459997 46.29726817549903 17.18350215077092 14.707782409130079 50 21.15306531822804 46.91710714341988 16.648385012841597 15.281442525510483 51 20.449110541989423 47.08158142567811 17.82661235096412 14.642695681368348 52 23.25014271810417 46.03449717775707 15.7534122050341 14.961947899104663 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.5 2 1.0 3 3.5 4 6.0 5 72.0 6 138.0 7 701.5 8 1265.0 9 2004.0 10 2743.0 11 5112.5 12 7482.0 13 7399.5 14 8177.5 15 9038.0 16 9439.5 17 9841.0 18 12214.0 19 14587.0 20 19359.5 21 24132.0 22 32221.0 23 40310.0 24 49315.5 25 58321.0 26 57640.0 27 56959.0 28 51139.0 29 45319.0 30 41533.5 31 37748.0 32 33810.0 33 29872.0 34 27060.5 35 24249.0 36 25573.5 37 26898.0 38 26503.5 39 32239.5 40 38370.0 41 42671.5 42 46973.0 43 49942.0 44 52911.0 45 55705.0 46 58499.0 47 57010.5 48 55522.0 49 51346.5 50 47171.0 51 41476.5 52 35782.0 53 31592.5 54 27403.0 55 21120.5 56 14838.0 57 13053.5 58 11269.0 59 8726.5 60 6184.0 61 4634.0 62 3084.0 63 2295.5 64 1341.0 65 1175.0 66 731.5 67 288.0 68 340.5 69 393.0 70 271.0 71 149.0 72 617.5 73 1086.0 74 568.5 75 51.0 76 31.0 77 11.0 78 9.5 79 8.0 80 9.5 81 11.0 82 21.5 83 32.0 84 16.5 85 1.0 86 0.5 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 825053.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.13254292508543 #Duplication Level Percentage of deduplicated Percentage of total 1 85.1701921099724 33.32926198681268 2 6.463188564731398 5.058420078845455 3 2.152127905346452 2.526547129087327 4 1.1570717581656405 1.8111664097528397 5 0.7089388330048871 1.3871289656911863 6 0.5084953629160265 1.193922996991098 7 0.40159826787044445 1.1000893019256088 8 0.3359658228140683 1.051775758610654 9 0.24234899669740043 0.8535359264501169 >10 2.394294638039038 19.559826326438028 >50 0.25883488420547357 6.992955169763973 >100 0.17443219604248292 13.257316449953633 >500 0.022194777632645536 5.983248794763319 >1k 0.01031588256165215 5.894804704914127 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAAGTTCATAGGGATCATCACTAATGGAACGCCGGAGGTGAACACCACGCGG 2984 0.3616737348994549 No Hit TTATTTCATAGGGACCAAAACCTGGCAGAGATACAATAAAAAAAGAAAACTT 2398 0.2906479947348837 No Hit GCGATTCATAGGGTGGGCATGGTGGCTCACGCCTGTAATCCCAGCACTTTGG 2160 0.26180136306394863 No Hit ATTTTTCATAGGGGGATCACTTGAGTCCAGGAGTTGGAGACTAGCCTGGACA 2044 0.24774166023273655 No Hit CATGTTCATAGGGGGCCGCTGCGGGGTTGTAGGACCACGAGATCTGATTGAA 1998 0.2421662608341525 No Hit TGGCTTCATAGGGGTACTTTACACTCAAAGACGACACCGCCCAGGTACGCTG 1971 0.23889374379585313 No Hit GGTTTTCATAGGGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTC 1846 0.2237432019518746 No Hit AGGGTTCATAGGGGAGGATAACTGATGCATCACCATCATCACCATGCTCCTG 1735 0.2102895207944217 No Hit GCTCTTCATAGGGTAAACAATACATTTAGGCCAGGCGCAGTGGCTCACGCCT 1591 0.19283609659015843 No Hit TGGATTCATAGGGAGGCCAACATAGTGAAACCGCATCTCTACAAAAATTAGC 1550 0.18786671886533352 No Hit GGTTTTCATAGGGGGGGATGAGGCTGGGAAAGGAGAAGAGATGGACCCGCGA 1469 0.17804916775043542 No Hit CGTATTCATAGGACGCAGAGTGCAGTTCATAGGGCGGCTGTGGTGGCTCACG 1417 0.17174654234334036 No Hit GCTTTTCATAGGGCACCTGGCAGGAGGGCCAGTGCCATGGGCTTTAACACAT 1351 0.16374705624971972 No Hit GTATTTCATAGGGTGGAGCAGGTCCCAAGGGTTGGGCTGTTCGCCCATTAAA 1346 0.16314103457596058 No Hit TGATTTCATAGGGACGCAGAGTCATATTCATAGGGCGCCTGTAATCCCAACA 1339 0.16229260423269778 No Hit GCGGTTCATAGGGTGATGTCACTGTGGTCAGGAGAATGGGATATAAGCTGAC 1319 0.1598685175376612 No Hit ATAGTTCATAGGGGCTCAGATTGGACGCTGGCGGCAGGCTTAACACATGCAA 1313 0.15914129152915024 No Hit AGACTTCATAGGGGTCGCCTGCTGGGTCTGTTCCAGAACCGTTACGGACCTA 1311 0.1588988828596466 No Hit CCTCTTCATAGGGATCAACGCAGAGTGTTCTTCATAGGGAACTGCTCTGTCC 1224 0.14835410573623756 No Hit TCGATTCATAGGGACGTCAGGCAAGTAAGTTACGCGTTGTTTTTGCGACAGA 1200 0.1454452017021937 No Hit GGTTTTCATAGGGTCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTC 1182 0.14326352367666076 No Hit TGGGTTCATAGGGGTGTCGATGGTAGAACGAAGCGGCGTCGAAGCCTGTAAA 1175 0.14241509333339797 No Hit ACCATTCATAGGGGTCTTCCAGAAAACAGAAGACAGAATGCCTCATACCTCG 1165 0.1412030499858797 No Hit TTCCTTCATAGGGGTTGTCCGACCAATAAGTCTGCAAGAAGGCCTGGGTGGC 1158 0.14035461964261692 No Hit AGTGTTCATAGGGGCAGAGTATTATTCATAGGGGTGGACTCTCTGACATAAA 1150 0.13938498496460228 No Hit TTGATTCATAGGGACAGACAAAGGCTGGTACAGAAATCTAAGAAACACTGTC 1144 0.1386577589560913 No Hit ATCCTTCATAGGGATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGA 1133 0.1373245112738212 No Hit TGTTTTCATAGGGTCTGTGGACTTAGGATGCACAGACTAGCTCCATGGGACT 1122 0.1359912635915511 No Hit TTCGTTCATAGGGGCCTTTTCCTTCAAAAACTATTCCATAAAATTAAAAAAA 1110 0.13453681157452915 No Hit GGCCTTCATAGGGAGTCTCTGTGACCTTATCGACGCGCATGTGAGCCTATAG 1102 0.13356717689651454 No Hit GCTGTTCATAGGGATCCACAGTGCGCACGCAAAAACGCTGGATACCCAAGGG 1100 0.13332476822701086 No Hit GCAATTCATAGGGGTAACACTTTGGGAGGCCGAGGCGGGCGGATCACAAGGT 1046 0.12677973415041216 No Hit GTAGTTCATAGGGGCTGATCAGCTTCGAGTCGGAAGTGAACAACATCCGCAA 1035 0.12544648646814205 No Hit AGACTTCATAGGGGGTGCGGGCGGGCGCGACCCGCTCCGGGGACAGTGCCAG 990 0.1199922914043098 No Hit TAGTTTCATAGGTGTTTAAAATATCACTTTGAGGACAAGAGTTGATCATGCT 989 0.11987108706955796 No Hit TATCTTCATAGGGGGTTTCATTTGATGCTCGATGAGTTTTTCTAAGAATTAA 976 0.11829543071778419 No Hit TAGGTTCATAGGGGCTGAGCCACTGTGGTGGGAGCCTGTGCCCAGGTTCAAG 965 0.11696218303551408 No Hit TTAATTCATAGGGAACCATAAAACTCCTAAAAGAAAACATAGATGGTATGCT 958 0.11611375269225128 No Hit TTGCTTCATAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 950 0.11514411801423666 No Hit CGTTTTCATAGGGATTACTCCTCATATGCACGATTAGGGCAAGTCGGCCAAG 932 0.11296243998870376 No Hit CTCATTCATAGGCTGCTTTAAGACCTGATAGTGCCTGCTATATCGAATCACA 922 0.11175039664118548 No Hit TCTATTCATAGGGGCCAAATCAGTAAATTTGTGCTACCATGTATTGCGGGAT 919 0.11138678363693 No Hit CTTGTTCATAGGGTCGAGACCAGCCTGGCCGACATGGAGAAACCCCGTCTCT 905 0.10968992295040439 No Hit CTTTTTCATAGGGTAATTTTTTCTTCAGGCAAGGGAAACAAGCATAAATAAA 870 0.10544777123409042 No Hit GGCGTTCATAGGGGAGAACATAGGCAAAACACTCTCCGACATATATCAATCA 867 0.10508415822983494 No Hit TGTTTTCATAGGGGCCTGTTCCCTCTGGTATCTAATAAGCTAGCAGATTCCC 864 0.10472054522557946 No Hit GTGGTTCATAGGCTCAGGAGACACTGGAGAAGTGTCTCACTCAAAGGCAGAA 850 0.10302368453905385 No Hit GGTCTTCATAGGGACACCAAAATAACGATCATCACGACATAATTTTTCTTTA 848 0.1027812758695502 No Hit TTCCTTCATAGGGACAAGATGAATCTCACAGCTATGATGTTGAGCAAAAGAC 848 0.1027812758695502 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.2579228243518901 0.0 0.0 0.0 0.0 11 0.27355818353487593 0.0 0.0 0.0 0.0 12 0.3767030724086816 0.0 0.0 0.0 0.0 13 0.48130241329950924 0.0 0.0 0.0 0.0 14 0.7681930736570862 0.0 0.0 0.0 0.0 15 1.2051347004374264 0.0 0.0 0.0 0.0 16 1.4213632336346878 0.0 0.0 0.0 0.0 17 1.569111317697166 0.0 0.0 0.0 0.0 18 1.7638866836433538 0.0 0.0 0.0 0.0 19 1.9504201548264173 0.0 0.0 0.0 0.0 20 2.1454379294421084 0.0 0.0 0.0 0.0 21 2.374150509118808 0.0 0.0 0.0 0.0 22 2.6346186245004866 0.0 0.0 0.0 0.0 23 2.830969646798448 0.0 0.0 0.0 0.0 24 3.0359261768637893 0.0 0.0 0.0 0.0 25 3.285849515122059 0.0 0.0 0.0 0.0 26 3.597102246764753 0.0 0.0 0.0 0.0 27 3.885447359139352 0.0 0.0 0.0 0.0 28 4.1611872206997615 0.0 0.0 0.0 0.0 29 4.560313095037531 0.0 0.0 0.0 0.0 30 5.067189622969676 0.0 0.0 0.0 0.0 31 5.442923060700343 0.0 0.0 0.0 0.0 32 5.671878049046546 0.0 0.0 0.0 0.0 33 5.861926445937413 0.0 0.0 0.0 0.0 34 6.059247102913389 0.0 0.0 0.0 0.0 35 6.248568273795744 0.0 0.0 0.0 0.0 36 6.446010135106472 0.0 0.0 0.0 0.0 37 6.649633417489543 0.0 0.0 0.0 0.0 38 6.850832613177578 0.0 0.0 0.0 0.0 39 7.065606694357817 0.0 0.0 0.0 0.0 40 7.249231261506837 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCACAC 105 0.0 46.000004 38 GTGTTTG 55 1.8189894E-12 46.000004 46 CTTAATG 55 1.8189894E-12 46.000004 24 CTTAACA 110 0.0 46.000004 39 TAATATA 55 1.8189894E-12 46.000004 36 TCGCATC 55 1.8189894E-12 46.000004 20 TCTGACG 110 0.0 46.000004 29 GCCTTGG 55 1.8189894E-12 46.000004 36 ACTGCGG 55 1.8189894E-12 46.000004 24 CATATCT 55 1.8189894E-12 46.000004 17 ATTAGCT 55 1.8189894E-12 46.000004 45 ATCTACT 55 1.8189894E-12 46.000004 33 TTGTGAG 55 1.8189894E-12 46.000004 29 GTCTGAC 110 0.0 46.000004 28 TTAGCTA 55 1.8189894E-12 46.000004 46 GCGCGTG 55 1.8189894E-12 46.000004 42 GCTATTA 55 1.8189894E-12 46.000004 42 TAGAAAC 55 1.8189894E-12 46.000004 28 TGGCGCT 55 1.8189894E-12 46.000004 46 TTGTCCG 110 0.0 46.000004 15 >>END_MODULE