##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528170_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1306308 Sequences flagged as poor quality 0 Sequence length 52 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.888355579235526 31.0 31.0 34.0 28.0 34.0 2 31.674409098007516 31.0 31.0 34.0 30.0 34.0 3 31.93608704838369 31.0 31.0 34.0 30.0 34.0 4 35.6020930745276 37.0 35.0 37.0 33.0 37.0 5 35.47905088233403 37.0 35.0 37.0 33.0 37.0 6 35.761240840598084 37.0 35.0 37.0 33.0 37.0 7 35.60369300348769 37.0 35.0 37.0 33.0 37.0 8 35.54704327004045 37.0 35.0 37.0 33.0 37.0 9 37.36661951086574 39.0 37.0 39.0 34.0 39.0 10 36.857995204806215 39.0 37.0 39.0 33.0 39.0 11 37.46248664174146 39.0 37.0 39.0 35.0 39.0 12 37.52186926819709 39.0 37.0 39.0 35.0 39.0 13 37.444601885619626 39.0 37.0 39.0 35.0 39.0 14 37.84211763228886 40.0 38.0 40.0 33.0 40.0 15 36.969297439807455 39.0 36.0 40.0 31.0 40.0 16 36.382200063078535 38.0 35.0 40.0 31.0 40.0 17 35.999802496807796 38.0 35.0 40.0 30.0 40.0 18 36.16907038768805 38.0 35.0 40.0 30.0 40.0 19 36.39906897913815 39.0 35.0 40.0 31.0 40.0 20 36.516025317153385 39.0 35.0 40.0 31.0 40.0 21 36.53027769867443 39.0 35.0 40.0 31.0 40.0 22 36.63608735459019 39.0 35.0 40.0 31.0 40.0 23 36.63938060549273 39.0 35.0 40.0 31.0 40.0 24 36.6490368274557 39.0 35.0 40.0 31.0 40.0 25 36.76423171258233 39.0 35.0 40.0 31.0 40.0 26 36.60718146103369 39.0 35.0 40.0 31.0 40.0 27 36.394293688777836 39.0 35.0 40.0 31.0 40.0 28 36.139611791399886 38.0 35.0 40.0 30.0 40.0 29 36.02293103923424 38.0 35.0 40.0 30.0 40.0 30 35.87507081025302 38.0 35.0 40.0 30.0 40.0 31 35.80719707756517 38.0 35.0 40.0 30.0 40.0 32 35.74952461440947 38.0 35.0 40.0 30.0 40.0 33 35.53961010726414 38.0 35.0 40.0 30.0 40.0 34 35.290510354372785 38.0 34.0 40.0 28.0 40.0 35 35.172706589870074 37.0 34.0 40.0 27.0 40.0 36 34.97835043496633 37.0 34.0 40.0 26.0 40.0 37 34.73208003013072 37.0 34.0 40.0 25.0 40.0 38 34.31150310646494 36.0 33.0 40.0 23.0 40.0 39 33.98715234079559 36.0 33.0 40.0 22.0 40.0 40 33.62178521451296 35.0 33.0 40.0 21.0 40.0 41 33.066942099413005 35.0 33.0 40.0 18.0 40.0 42 32.4638224675957 35.0 32.0 39.0 15.0 40.0 43 31.845403228028918 35.0 31.0 39.0 10.0 40.0 44 31.212203400729383 35.0 30.0 39.0 10.0 40.0 45 30.802825979784245 35.0 29.0 39.0 9.0 40.0 46 30.351306123823786 35.0 26.0 38.0 8.0 40.0 47 29.8059140723321 35.0 24.0 38.0 8.0 40.0 48 29.411367763192143 35.0 23.0 38.0 8.0 40.0 49 29.129964755631903 35.0 23.0 38.0 8.0 40.0 50 28.805271038683067 35.0 20.0 37.0 8.0 40.0 51 28.41084874317542 34.0 20.0 37.0 8.0 40.0 52 27.541166401798044 33.0 17.0 36.0 8.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 4.0 14 10.0 15 22.0 16 102.0 17 327.0 18 803.0 19 1673.0 20 2874.0 21 4823.0 22 6980.0 23 10189.0 24 14074.0 25 18830.0 26 24709.0 27 32592.0 28 41569.0 29 52234.0 30 62928.0 31 67194.0 32 64724.0 33 67215.0 34 87715.0 35 130911.0 36 127672.0 37 191454.0 38 241622.0 39 53057.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.157105368718554 21.70514151333376 35.92590721330651 8.211845904641171 2 20.193246921859163 23.75672506024613 36.51190990179958 19.53811811609513 3 21.48658662428769 23.20999335531896 35.734375047844765 19.56904497254859 4 20.376281856958695 24.921764239367743 32.68540038030847 22.016553523365086 5 0.0 100.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 0.0 100.0 0.0 0.0 8 0.0 100.0 0.0 0.0 9 0.0 0.0 100.0 0.0 10 0.0 100.0 0.0 0.0 11 99.29350505393828 0.6078964532101159 0.06208336778156453 0.036515125070044736 12 98.71921476405258 1.077311017003647 0.11505709220183907 0.08841712674193222 13 97.04686796681946 2.0048105041077604 0.5876102726156465 0.36071125645712954 14 58.58932196694807 28.000747143858874 6.545240479274413 6.864690409918641 15 36.36378250764751 32.185212063311255 17.3806636719671 14.070341757074138 16 39.61707346200131 25.584471655995372 19.46248511070896 15.335969771294366 17 23.047321152438784 28.551229878405397 24.070203964149343 24.331245005006476 18 20.571335397165143 38.976412913340496 25.572759257387993 14.879492432106364 19 26.00650076398522 37.77539447052303 25.14873980715115 11.069364958340605 20 20.706831773211217 38.00818796179768 26.725550176528046 14.559430088463058 21 26.163737801498577 37.31440058546683 16.587971596285104 19.933890016749494 22 24.025191608717087 44.86461079622876 15.871754593863011 15.238443001191143 23 18.629450328712675 44.23550954292556 18.876865180340317 18.25817494802145 24 16.810277514950535 48.769356078352125 16.006791660159777 18.41357474653757 25 20.96504040394761 42.625781974848195 18.59706899138641 17.81210862981778 26 18.43676988887766 42.28420862461227 17.39421330957171 21.884808176938364 27 20.002403721021384 48.941979992467324 13.572603092073232 17.483013194438065 28 20.84095022000937 45.22624067218451 14.75907672616259 19.173732381643532 29 22.121735455956788 43.0435241918445 13.804707618723915 21.0300327334748 30 23.562819794412956 44.87280182009143 12.937148053904593 18.62723033159102 31 20.072295354541193 48.12333691594938 12.422721134678804 19.381646594830624 32 19.37965625258362 53.469855501152864 12.46436521861613 14.686123027647385 33 23.579431497012955 50.23792245014192 13.542824509993048 12.63982154285207 34 20.384779087320908 50.95398634931425 13.954672251873218 14.706562311491625 35 22.069450696160477 51.32924241449949 12.619918120382023 13.98138876895801 36 21.585185117139297 50.500724178371414 16.565159212069435 11.348931492419858 37 18.33510933103066 51.896413403270905 16.656868058681415 13.111609207017027 38 14.966301974725715 56.73478230248915 16.674781138904454 11.624134583880677 39 17.505902130278617 56.248143623096546 14.312321443334955 11.933632803289882 40 20.54193957320938 54.39758464313164 12.849572995036393 12.21090278862259 41 22.082234817516238 52.58889940197871 12.387813593731341 12.941052186773716 42 20.397333553802014 51.49321599500271 12.110696711648401 15.998753739546876 43 21.906089528656338 49.55469919804518 13.196122200889837 15.34308907240865 44 20.51361547200201 48.175162365996385 14.734120896450149 16.577101265551462 45 19.92776588675871 47.400919231911615 16.259718228779125 16.411596652550546 46 21.80389310943514 45.36640669734856 13.952069496627134 18.877630696589165 47 24.581798473254395 43.48170569268503 13.70075051213037 18.235745321930203 48 24.726174837787106 43.19425434124265 14.563028014832643 17.516542806137604 49 23.238087801651677 45.04022022371446 15.089473539165343 16.632218435468513 50 22.99419432476874 46.02788928797803 14.16105543256261 16.816860954690625 51 21.888329551683064 43.63243584208318 16.715047293593855 17.764187312639898 52 24.360947035461773 40.64485557770449 16.187147288388342 18.80705009844539 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 6.0 2 12.0 3 26.0 4 40.0 5 136.5 6 233.0 7 1687.0 8 3141.0 9 4683.5 10 6226.0 11 5867.5 12 5509.0 13 7000.0 14 8986.5 15 9482.0 16 10989.0 17 12496.0 18 16027.5 19 19559.0 20 26951.5 21 34344.0 22 46194.0 23 58044.0 24 69693.5 25 81343.0 26 82668.5 27 83994.0 28 78473.0 29 72952.0 30 65328.5 31 57705.0 32 52214.5 33 46724.0 34 42739.5 35 38755.0 36 39699.0 37 40643.0 38 42018.0 39 46101.5 40 48810.0 41 51625.0 42 54440.0 43 53656.0 44 52872.0 45 55214.5 46 57557.0 47 58608.5 48 59660.0 49 56391.5 50 53123.0 51 54796.0 52 56469.0 53 60259.5 54 64050.0 55 69823.0 56 75596.0 57 64461.5 58 53327.0 59 42555.0 60 31783.0 61 28588.5 62 25394.0 63 19967.5 64 14916.0 65 15291.0 66 12785.5 67 10280.0 68 6466.5 69 2653.0 70 1753.5 71 854.0 72 3588.0 73 6322.0 74 3247.0 75 172.0 76 95.5 77 19.0 78 13.0 79 7.0 80 4.0 81 1.0 82 0.5 83 0.0 84 0.5 85 1.0 86 0.5 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1306308.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.77544065708314 #Duplication Level Percentage of deduplicated Percentage of total 1 87.01175602669838 31.998956702284424 2 5.641302465419842 4.149227680914083 3 1.900615413825808 2.096879080892655 4 0.9481850707290742 1.3947969520211698 5 0.6175245683312061 1.1354869058477575 6 0.4390019165324692 0.9686693357871352 7 0.34378623271129566 0.8850023139857499 8 0.2741095718551966 0.80644002346394 9 0.22371730316082275 0.7404572165718165 >10 2.231578328986449 16.931291275361986 >50 0.1706424932088063 4.257229388650073 >100 0.12687415636297072 11.060779831616308 >500 0.05154920113807311 13.575001414864312 >1k 0.019357251039602966 9.999781877738556 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCCCACAATAGGGGCGGCACCGCCGCCTACGCCGGGCACGTCGCCAAGTACG 2624 0.20087146369768843 No Hit CTTGACAATAGGGAGCTCGGGCTGCTCGTCCGCTCGGCCTCTCCCCCCAACC 2623 0.20079491207280367 No Hit GTCAACAATAGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTTTTC 2437 0.18655630984423277 No Hit AATCACAATAGGGGGGCTGGTGAGATGGCTCAGTGGTTAAGAGCACCGACTG 2426 0.18571424197050004 No Hit CAGGACAATAGGGATGAACAGTTGCCCATACTGGGCAACCGCCCTAGAGAGC 2275 0.17415494661289682 No Hit TATCACAATAGGGGCCCCTTTTCCCCTGGCTGGCAGCGCGGAGGCCGCACGA 2220 0.16994460724423338 No Hit TTCGACAATAGGGGCCTTGGCCTGGCCTTAGCAGAGAGTATCTGTTGCAGTC 2174 0.16642323249953303 No Hit GTTCACAATAGGGCTCTTTCGAGTCTTGGCTCCAAGATGACCAAAAAAAGAA 2171 0.16619357762487866 No Hit TATGACAATAGGGCTTTTCTGCCTCCTCTGCCGCCATGGCGCCTGTGAAAAA 2070 0.1584618635115149 No Hit GGTCACAATAGGGATTGATACCACATAGAAAGCATGCAGCCATAGACTTCTG 2033 0.15562945339077766 No Hit GTGGACAATAGGGGAGTTTTCACAATAGGGGAGCCCACTTGGGTGGATTTTT 2006 0.15356255951888836 No Hit GAGAACAATAGGGGGGCTGGTGAGATGGCTCAGTGGTTAAGAGCACCGACTG 1966 0.15050049452349676 No Hit GGTGACAATAGGGGATGAAAGCGTTGAAGGCTAAGTTCATTAAAATGACTTC 1959 0.14996463314930322 No Hit TGTTACAATAGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGC 1918 0.14682601652902685 No Hit CCGGACAATAGGGGGGTGGCTCACGCCTGTAATCCCAGCACTTTGGTTGGCC 1861 0.14246257391059383 No Hit AGCCACAATAGGGGCTTTTCCTCAGCTGCCGCCAAGGTGCTCGGTCCTTCCG 1814 0.13886464754100872 No Hit TCTTACAATAGGGGCCTTTCCAGCCTCCGCCTCGGACCCTGCAGCCGCCGCG 1693 0.12960190092994914 No Hit CCGCACAATAGGGGGGTGGTGGTGGCGTACGCCTTTAGTCCCAGCACTTGGG 1675 0.12822397168202293 No Hit CTAGACAATAGGGGGCTGGTGAGATGGCTCAGTGGTTAAGAGCACCGACTGC 1674 0.1281474200571381 No Hit TTGTACAATAGGGGTCTGACCAGAGGCTCCTTGGGGCTCCCTGGACAGAGTC 1643 0.12577431968570965 No Hit CTAGACAATAGGGCGAGCAGGAGATGGCCACTGCCGCATCCTCTTCCTCCCT 1636 0.12523845831151612 No Hit GCGCACAATAGGGGGGCTGGTGAGATGGCTCAGTGGTTAAGAGCACCGACTG 1615 0.12363087418893552 No Hit GATGACAATAGGGGCTTTTCCTCAGCTGCCGCCAAGGTGCTCGGTCCTTCCG 1569 0.1201094994442352 No Hit TTTGACAATAGGGGCTGGTGAGATGGCTCAGTGGTTAAGAGCACCGACTGCT 1548 0.11850191532165463 No Hit GACTACAATAGGGCTTTCGGCCGCCGCAGCCATCTTCCAGTAACTCGCCAAA 1543 0.11811915719723066 No Hit TGCTACAATAGGGACACGCCTGTAACCCCAGCACTTTGGGAGGTGGGTAGAT 1525 0.11674122794930444 No Hit ACGTACAATAGGGGCCGGGCGCGGTGGCGCACGCCTGTAGTCCCAGCTACTC 1521 0.1164350214497653 No Hit TAACACAATAGGGGCTCTTTCCTTTTGCGGCCATCGGTGGATCGCAGCCGCC 1480 0.11329640482948891 No Hit CTTAACAATAGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCG 1462 0.11191847558156269 No Hit TGTTACAATAGGGCTTCCTGTCCCGGCCGCCATCGGAGAGCATCAGCCATGG 1438 0.11008123658432774 No Hit ATTAACAATAGGGCTCTTCGGACTTGGGCTTGGGTTCCGGCGACATGGCTAA 1425 0.10908606546082547 No Hit ATTAACAATAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 1398 0.10701917158893615 No Hit CAATACAATAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGAC 1393 0.1066364134645122 No Hit TGTGACAATAGGGGGGTGGTGGTGGCGTACGCCTTTAGTCCCAGCACTTGGG 1390 0.10640675858985783 No Hit AAGAACAATAGGGACAAAGTGAGACTTCATCTCTACAAAAAATTCAAAAAAT 1385 0.10602400046543388 No Hit GATTACAATAGGGGGACCCTCCCAAACTGCTAGGGCTCTAGGAGGAGACCTA 1372 0.10502882934193161 No Hit GTGGACAATAGGGGGTTCCCGGCAGCCCCCGCGGCGGCCGCTGAAGGTGAGC 1354 0.10365090009400539 No Hit GTTTACAATAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 1352 0.10349779684423581 No Hit GTCTACAATAGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCCTCCT 1340 0.10257917734561833 No Hit GCCAACAATAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACT 1334 0.10211986759630959 No Hit CTGGACAATAGGGGAGTTACAACAATAGGGGATCTTTCCATCGGTGACCAGC 1321 0.10112469647280733 No Hit GCATACAATAGAGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCG 1314 0.10058883509861381 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.23447762702211117 0.0 0.0 0.0 0.0 11 0.25116588124699535 0.0 0.0 0.0 0.0 12 0.36308435682855805 0.0 0.0 0.0 0.0 13 0.45165458682025983 0.0 0.0 0.0 0.0 14 0.7238721649105724 0.0 0.0 0.0 0.0 15 1.0957599586008813 0.0 0.0 0.0 0.0 16 1.2944114251769108 0.0 0.0 0.0 0.0 17 1.4469022619474121 0.0 0.0 0.0 0.0 18 1.6805378210957906 0.0 0.0 0.0 0.0 19 1.8671706825649081 0.0 0.0 0.0 0.0 20 2.030455298444165 0.0 0.0 0.0 0.0 21 2.215786782290241 7.65516248847898E-5 0.0 0.0 0.0 22 2.405405157129865 7.65516248847898E-5 0.0 0.0 0.0 23 2.568995979508661 7.65516248847898E-5 0.0 0.0 0.0 24 2.7502702272358435 7.65516248847898E-5 0.0 0.0 0.0 25 2.955887891676389 7.65516248847898E-5 0.0 0.0 0.0 26 3.2033027433040293 7.65516248847898E-5 0.0 0.0 0.0 27 3.47437204702107 7.65516248847898E-5 0.0 0.0 0.0 28 3.7219400018984805 7.65516248847898E-5 0.0 0.0 0.0 29 4.004951359097548 7.65516248847898E-5 0.0 0.0 0.0 30 4.339252304969425 7.65516248847898E-5 0.0 0.0 0.0 31 4.639870535891995 7.65516248847898E-5 0.0 0.0 0.0 32 4.908872945737146 7.65516248847898E-5 0.0 0.0 0.0 33 5.116787158924235 7.65516248847898E-5 0.0 0.0 0.0 34 5.303113813893813 7.65516248847898E-5 0.0 0.0 0.0 35 5.477651518631134 7.65516248847898E-5 0.0 0.0 0.0 36 5.65770094036016 7.65516248847898E-5 0.0 0.0 0.0 37 5.836678639340799 7.65516248847898E-5 0.0 0.0 0.0 38 6.025454946306691 7.65516248847898E-5 0.0 0.0 0.0 39 6.216068492269817 7.65516248847898E-5 0.0 0.0 0.0 40 6.418777194964741 7.65516248847898E-5 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACAACTG 20 6.3117716E-4 46.000004 24 ATCCTTT 55 1.8189894E-12 46.000004 18 CTTGTCC 80 0.0 46.000004 26 GCCCCGG 105 0.0 46.000004 23 ATTTAAG 55 1.8189894E-12 46.000004 15 ACAACCG 20 6.3117716E-4 46.000004 24 ATCCTAT 110 0.0 46.000004 40 ATCCTAG 40 5.6115823E-9 46.000004 14 CTATGTT 110 0.0 46.000004 39 GTGCACG 40 5.6115823E-9 46.000004 28 CTAGAGG 40 5.6115823E-9 46.000004 45 CATGGAA 105 0.0 46.000004 29 CTATGGC 20 6.3117716E-4 46.000004 37 TAATAAT 20 6.3117716E-4 46.000004 25 CTGTCGA 80 0.0 46.000004 37 TCGTTCT 40 5.6115823E-9 46.000004 16 CTGTCAT 55 1.8189894E-12 46.000004 42 GAAGCTA 20 6.3117716E-4 46.000004 13 ACCGGTA 40 5.6115823E-9 46.000004 46 GATGTTT 40 5.6115823E-9 46.000004 38 >>END_MODULE