##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528167_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 539118 Sequences flagged as poor quality 0 Sequence length 52 %GC 36 >>END_MODULE >>Per base sequence quality warn #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.31146057078413 31.0 31.0 33.0 27.0 33.0 2 31.265509591592192 31.0 31.0 34.0 28.0 34.0 3 31.654810264172223 31.0 31.0 34.0 30.0 34.0 4 35.40027044172148 37.0 35.0 37.0 33.0 37.0 5 35.45969713495005 37.0 35.0 37.0 33.0 37.0 6 32.61633074762853 35.0 32.0 35.0 28.0 36.0 7 34.33273235173005 35.0 35.0 36.0 32.0 37.0 8 35.13324170218765 36.0 35.0 37.0 33.0 37.0 9 37.31143645732474 39.0 37.0 39.0 34.0 39.0 10 37.149755712107556 39.0 37.0 39.0 33.0 39.0 11 37.626775585307854 39.0 37.0 39.0 35.0 39.0 12 37.670958862438276 39.0 37.0 39.0 35.0 39.0 13 37.39672576319099 39.0 37.0 39.0 35.0 39.0 14 37.469680107137954 40.0 37.0 40.0 32.0 40.0 15 36.63099915046428 38.0 35.0 40.0 31.0 40.0 16 36.98514796389659 39.0 36.0 40.0 32.0 40.0 17 36.777098891151844 39.0 36.0 40.0 31.0 40.0 18 36.9964349177731 39.0 36.0 40.0 32.0 40.0 19 37.11456675533 39.0 36.0 40.0 32.0 40.0 20 37.21251748225806 39.0 36.0 40.0 32.0 40.0 21 37.226145296577 39.0 36.0 40.0 32.0 40.0 22 37.28000549044921 39.0 36.0 40.0 32.0 40.0 23 37.19883587637586 39.0 36.0 40.0 32.0 40.0 24 37.11795933357818 39.0 36.0 40.0 32.0 40.0 25 37.12615234512667 39.0 36.0 40.0 32.0 40.0 26 36.85198602161308 39.0 36.0 40.0 31.0 40.0 27 36.37926947347334 39.0 35.0 40.0 30.0 40.0 28 35.74585897706996 37.0 35.0 40.0 30.0 40.0 29 35.32331882816007 36.0 34.0 40.0 30.0 40.0 30 35.038765168293395 35.0 34.0 40.0 29.0 40.0 31 34.89228888666303 35.0 33.0 40.0 28.0 40.0 32 34.72060105579855 35.0 33.0 40.0 28.0 40.0 33 34.39662745447193 35.0 33.0 40.0 25.0 40.0 34 34.06128157472019 35.0 33.0 40.0 23.0 40.0 35 33.82424626890588 35.0 33.0 40.0 22.0 40.0 36 33.4091219361995 35.0 33.0 39.0 21.0 40.0 37 33.05713034994194 35.0 33.0 39.0 19.0 40.0 38 32.440506531037734 35.0 33.0 39.0 15.0 40.0 39 31.576068689971397 35.0 31.0 39.0 11.0 40.0 40 30.681303536517053 35.0 27.0 39.0 9.0 40.0 41 29.661743811187904 35.0 23.0 38.0 8.0 40.0 42 28.70059059426693 35.0 18.0 38.0 8.0 40.0 43 27.997926242492365 35.0 15.0 38.0 8.0 40.0 44 27.453223598544287 34.0 12.0 38.0 8.0 40.0 45 27.086316910212606 34.0 10.0 37.0 8.0 40.0 46 26.715173672554062 33.0 10.0 37.0 8.0 40.0 47 26.160851613190435 33.0 10.0 36.0 8.0 40.0 48 25.798739793514592 33.0 10.0 36.0 8.0 40.0 49 25.47354011552202 33.0 10.0 35.0 8.0 40.0 50 25.113713509843855 33.0 9.0 35.0 8.0 39.0 51 24.7583571685605 32.0 9.0 35.0 8.0 39.0 52 23.943734024833155 30.0 9.0 35.0 8.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 3.0 14 3.0 15 13.0 16 44.0 17 124.0 18 312.0 19 836.0 20 1485.0 21 2746.0 22 4220.0 23 6384.0 24 9056.0 25 12449.0 26 16333.0 27 21451.0 28 27901.0 29 34346.0 30 37337.0 31 31944.0 32 25150.0 33 25682.0 34 34577.0 35 45885.0 36 55918.0 37 68964.0 38 67859.0 39 8096.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.2861859555793 22.674627818028707 38.20258273698893 4.836603489403062 2 28.749179214939957 20.50348903208574 33.985880642085775 16.761451110888526 3 21.822124284479465 20.57842624434725 37.17980108250884 20.41964838866445 4 25.580114186504627 21.302757466825444 33.29938900203666 19.81773934463327 5 100.0 0.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 0.0 100.0 0.0 0.0 8 0.0 100.0 0.0 0.0 9 0.0 0.0 100.0 0.0 10 100.0 0.0 0.0 0.0 11 98.6739452216398 1.021112261137636 0.13633378963418027 0.16860872758839437 12 97.70180183188096 1.466469307275958 0.3654116538494356 0.46631720699364515 13 84.585563828327 11.360036207286717 2.328432736432469 1.7259672279538059 14 28.96174863387978 51.984352219736685 12.305469303566195 6.748429842817343 15 20.563401704265114 58.90250371903739 14.212843941400585 6.321250635296911 16 28.187335611127807 48.806383760141564 13.877295879566255 9.128984749164376 17 15.108751701853768 51.91479416380087 14.382380109734788 18.594074024610567 18 13.709614592723671 58.61555355228354 15.953835709436524 11.72099614555626 19 18.885104930645984 54.43483615831784 20.102834629895497 6.577224281140678 20 14.737404427231143 52.9188415152156 21.658338248769287 10.685415808783977 21 19.575677309976665 50.85584232023416 12.830957230142568 16.73752313964661 22 19.744286037565058 55.3196146298213 14.4367281374393 10.49937119517434 23 15.596029069702736 53.20579168196944 18.604090384665323 12.5940888636625 24 15.677643855334084 58.159623681642984 12.613750607473689 13.54898185554925 25 15.329297111207566 54.68468869523926 17.810201106251323 12.175813087301853 26 13.96911251340152 56.47297994131155 13.256652532469701 16.301255012817233 27 13.345686844067533 61.4498124714812 11.490990840595195 13.713509843856075 28 14.544125775804185 59.231745183800214 12.971371759058314 13.252757281337296 29 18.667156355380456 54.43891689759941 13.23680530050935 13.657121446510784 30 21.67614511108885 57.004403488661104 10.503822910754232 10.815628489495806 31 16.473388015239706 60.544259327271575 10.379360362666429 12.602992294822284 32 15.354338011344455 63.43268078602458 11.88385474052063 9.329126462110336 33 18.122748637589545 61.98624419885813 11.46038529598344 8.430621867568881 34 14.390727076447085 64.27461149507158 11.974187469162596 9.360473959318739 35 17.543840124054473 60.778159883365056 13.789003520565071 7.888996472015402 36 13.59813621507722 60.834548280710344 15.323917954881864 10.243397549330572 37 14.292418357391146 61.139119821634594 15.516640141861338 9.051821679112921 38 15.478615071283095 58.23029466647376 16.161953412796457 10.12913684944669 39 17.138177541836853 55.947121038436855 15.053290745254285 11.861410674472008 40 21.21780389450918 53.57769542103955 14.094687990384294 11.109812694066976 41 22.140792924740037 51.41471811365972 15.035298394785556 11.409190566814686 42 21.637563576063126 50.16452798830683 16.0794111864193 12.118497249210748 43 21.9959266802444 51.62914241409117 14.328774034626928 12.04615687103751 44 22.089412707422124 48.34563119762279 16.66091653404264 12.904039560912453 45 24.406159690457375 43.86609239535686 17.686295022611006 14.041452891574757 46 28.31365304070723 45.38041764511666 14.18835950571118 12.117569808464937 47 28.377089987720684 45.88049369525781 13.893804324841685 11.84861199217982 48 26.449126165329297 46.85764526504402 13.952975044424413 12.740253525202275 49 23.482985172077356 51.03335447898234 10.88147678244837 14.602183566491936 50 22.284731728489866 49.75682503644842 13.380744104259179 14.577699130802532 51 21.507350895351294 51.419540805537935 12.554023423443475 14.519084875667293 52 23.36019201733201 48.646863951862116 13.17466677054003 14.818277260265841 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 2.0 4 4.0 5 8.0 6 12.0 7 451.0 8 890.0 9 2050.0 10 3210.0 11 6089.0 12 8968.0 13 9490.5 14 9281.5 15 8550.0 16 7587.0 17 6624.0 18 7911.0 19 9198.0 20 11307.0 21 13416.0 22 17384.5 23 21353.0 24 26018.0 25 30683.0 26 34061.5 27 37440.0 28 38042.5 29 38645.0 30 35889.0 31 33133.0 32 30628.5 33 28124.0 34 26585.5 35 25047.0 36 23268.5 37 21490.0 38 21783.0 39 21877.5 40 21679.0 41 23558.5 42 25438.0 43 26590.0 44 27742.0 45 28706.0 46 29670.0 47 29336.0 48 29002.0 49 26796.0 50 24590.0 51 21513.0 52 18436.0 53 15849.5 54 13263.0 55 12515.0 56 11767.0 57 8305.5 58 4844.0 59 5244.5 60 5645.0 61 5528.0 62 5411.0 63 3609.0 64 1192.0 65 577.0 66 360.0 67 143.0 68 104.5 69 66.0 70 92.5 71 119.0 72 70.5 73 22.0 74 16.0 75 10.0 76 7.5 77 5.0 78 5.0 79 5.0 80 3.0 81 1.0 82 0.5 83 0.0 84 0.0 85 0.0 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 539118.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.547065862160956 #Duplication Level Percentage of deduplicated Percentage of total 1 89.82376301560467 47.19975191168116 2 4.4443804422858575 4.670783036345899 3 1.4185773332372478 2.236262296805589 4 0.7869690401921283 1.6541165594582943 5 0.4730778043337126 1.2429425271125045 6 0.3437152225770411 1.0836735863149856 7 0.2739096531508663 1.0075204009080163 8 0.2178578992232963 0.9158234703262859 9 0.19566408407669442 0.9253416161553717 >10 1.8175303380070256 19.407661792272 >50 0.11466414226526833 4.093832310583257 >100 0.07467325308954778 8.358938331420024 >500 0.01167875522253591 4.273288480671445 >1k 0.0035390167341017905 2.930063679945136 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACTTGTAATGGGGGCAGTGGTGTGATCTAGGCTCACTGCAACCTCTGCCTCC 2192 0.4065900229634329 No Hit TACGGTAATGGGGCACGGGTGCGCATGATCGTGCTCCTGTCGTTGAGGACCC 2023 0.37524252575502953 No Hit GGGAGTAATGGGGGATCACCTACGGTCAGGAGTTTGAGACCAGCCTGACCAA 1825 0.33851587222092383 No Hit TGCAGTAATGGGGGGCGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGA 1726 0.32015254545387095 No Hit TGGTGTAATGGGGTACCATGCAAGTAACTACAAGAAAAGATGGCTATAAAAA 1514 0.28082905783149514 No Hit AAGTGTAATGGGGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGGC 1452 0.2693287925834419 No Hit GATCGTAATGGGGGAGGAGCCTGGTGAGCTACAGTCCATGGGGTCGCAATAG 1361 0.2524493710096862 No Hit ATCAGTAATGGGCACACCACCTTATCAAATAAAATATTCTTATAAAACGGCA 1283 0.23798129537503848 No Hit AGAGGTAATGGGGGAGATTATTAGCAAAAGCATGTTAAGAATTAATTACCGA 1223 0.2268520064253095 No Hit TGCGGTAATGGGGTGATCAAGACCTTTAGGAGAAGTGAGATGGGACATAGAG 1157 0.21460978858060756 No Hit AATCGTAATGGAGAACGGTACCCAAACTTTCGCGGAGGTACTCACCATCCAG 963 0.17862508764315047 No Hit ACCGGTAATGGGGTGGGCGGACTCGGCTTCGTGATGACACTGCTCTACACCA 956 0.1773266705990154 No Hit CTAGGTAATGGGGAAAGAAAATTTTCCCTCCCCTATACTCTTTTTATAACAC 918 0.17027812093085373 No Hit TTAAGTAATGGGGGCAACGTGTGTACTCACAATAAGTTTTTTTATATTCACT 917 0.17009263278169157 No Hit GCAGGTAATGGGGAATGCTAAGAGTTCAGCTTGCCAGTTCATTTTTCTGTCC 876 0.16248761866604342 No Hit GTTCGTAATGGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACT 854 0.15840687938447612 No Hit AATAGTAATGGGGAAGAGTGGTATCAACGCAGATTACAGTAATGGGGAACTA 854 0.15840687938447612 No Hit CTGGGTAATGGGGTGGGATGCACCGAACGATATCTACGGGGCGTTGGTGCCG 846 0.15692297419117893 No Hit CACTGTAATGGGGAGGATGTAGGCCAAAAGAGGCTCTGTCCAGCCTGACCAA 842 0.15618102159453032 No Hit TGGGGTAATGGGGGGGAATTCAGATAAAACGAATAGCTCGTAACCAAACATG 812 0.15061637711966583 No Hit CACAGTAATGGGGGTTCTAGGGTACATGTGCACAACGTGCAGGTTTGTTACA 796 0.14764856673307142 No Hit GTTCGTAATGGGGGTAGCGGCGCATTAAGCGCGGCGGGTGTGGTGGTTACGC 753 0.13967257631909896 No Hit CGGTGTAATGGGGGGGGAATTCACACCGGCGCACGCCACAGGCGTCATACTT 744 0.13800318297663963 No Hit TAATGTAATGGGGGATATATTCCCAGTAGTGAGATTGCTGGATCATATGGTA 711 0.13188207405428867 No Hit TTTAGTAATGGGGGGGAATTCTCCAGATTACTTCCATTTCCGCCCAAGCTGC 684 0.12687389402691063 No Hit TGTTGTAATGGGGGCTTCTACCTCTTCCCCTTGCGCAAGCGCACTGCTTCTG 661 0.12260766659618118 No Hit GCTTGTAATGGGGGGGAATTCACACCGGCGCACGCCACAGGCGTCATACTTC 656 0.12168022585037043 No Hit CAAGGTAATGGGGAAGCAGTGATATCAACGCAGAGTTATTGTAATAGGGGCT 646 0.11982534435874892 No Hit ACTTGTAATGGGGGGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAA 635 0.11778497471796527 No Hit AGCGGTAATGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 619 0.11481716433137086 No Hit CGGGGTAATGGGGGACAACAATTTCCATCTCCCTTCTTCTCTGCATAATGAA 596 0.11055093690064141 No Hit CGCGGTAATGGGGGGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAA 594 0.11017996060231712 No Hit GACGGTAATGAGGTCTTACCTATAAAAGAATAATGATAAAAATTACAGGGCC 587 0.10888154355818208 No Hit ACGGGTAATGGGGGAGTGGGTGTAATGGGGGCACCACTACACCCAGCTAGTT 587 0.10888154355818208 No Hit GATGGTAATGGGCGGGGAATTCTCCAGATTACTTCCATTTCCGCCCAAGCTG 575 0.10665568576823627 No Hit GGTGGTAATGGGGGGGAATTCCTGGAGATTGTCTCGTACGGTTAAGAGCCTC 569 0.10554275687326338 No Hit TATTGTAATGGGGCCTAAAGAACTGAGAATCCTGGGAATTTAACCATGTCAA 564 0.10461531612745263 No Hit TATTGTAATGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 559 0.10368787538164187 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.16712482239509718 0.0 0.0 0.0 0.0 12 0.3021601949851424 0.0 0.0 0.0 0.0 13 0.626764456018905 0.0 0.0 0.0 0.0 14 1.3891207490753417 0.0 0.0 0.0 0.0 15 2.0242321718065432 0.0 0.0 0.0 0.0 16 2.3751757500213313 0.0 0.0 0.0 0.0 17 2.5853338230220473 0.0 0.0 0.0 0.0 18 2.8490979711306244 0.0 0.0 0.0 0.0 19 3.086893778356501 0.0 0.0 0.0 0.0 20 3.3436093767969166 0.0 0.0 0.0 0.0 21 3.5955022833591164 0.0 0.0 0.0 0.0 22 3.889500999781124 0.0 0.0 0.0 0.0 23 4.167362247226024 0.0 0.0 0.0 0.0 24 4.457836688813952 0.0 0.0 0.0 0.0 25 4.790416940261687 0.0 0.0 0.0 0.0 26 5.149707485188771 0.0 0.0 0.0 0.0 27 5.491005679647127 0.0 0.0 0.0 0.0 28 5.834900708193754 0.0 0.0 0.0 0.0 29 6.219232153257728 0.0 0.0 0.0 0.0 30 6.634169142933458 0.0 0.0 0.0 0.0 31 6.985854673744894 0.0 0.0 0.0 0.0 32 7.246280035168553 0.0 0.0 0.0 0.0 33 7.4492040703519455 0.0 0.0 0.0 0.0 34 7.641555281033095 0.0 0.0 0.0 0.0 35 7.8021880182075165 0.0 0.0 0.0 0.0 36 7.96467563687356 0.0 0.0 0.0 0.0 37 8.121784099213901 0.0 0.0 0.0 0.0 38 8.278150608957594 0.0 0.0 0.0 0.0 39 8.44175115651861 0.0 0.0 0.0 0.0 40 8.618150386371815 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGAAA 35 1.0182157E-7 46.000004 17 TGTGACC 35 1.0182157E-7 46.000004 29 AAACTTT 75 0.0 46.000004 24 CGTCAGC 35 1.0182157E-7 46.000004 24 GAGGTAC 70 0.0 46.000004 35 GTGTCTA 35 1.0182157E-7 46.000004 40 CAAGACC 140 0.0 46.000004 18 AACGTCA 35 1.0182157E-7 46.000004 22 CCTACGC 35 1.0182157E-7 46.000004 13 CTTTATG 35 1.0182157E-7 46.000004 35 GGCACAC 70 0.0 46.000004 11 GGCATAT 35 1.0182157E-7 46.000004 46 ATAAGTT 85 0.0 46.000004 32 GAAACGT 35 1.0182157E-7 46.000004 20 AACGATA 85 0.0 46.000004 26 TTACCGA 140 0.0 46.000004 46 TGCGCAA 70 0.0 46.000004 32 CTCCCCT 70 0.0 46.000004 28 TAAGTTT 85 0.0 46.000004 33 ATTAGCA 140 0.0 46.000004 20 >>END_MODULE