##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528161_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2002693 Sequences flagged as poor quality 0 Sequence length 52 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.292826209508895 31.0 31.0 33.0 27.0 33.0 2 31.297444490992877 31.0 31.0 34.0 28.0 34.0 3 31.734917433675555 31.0 31.0 34.0 30.0 34.0 4 35.60687184705794 37.0 35.0 37.0 33.0 37.0 5 35.65930125086571 37.0 35.0 37.0 33.0 37.0 6 35.85648224665488 37.0 35.0 37.0 35.0 37.0 7 35.77813873619172 37.0 35.0 37.0 35.0 37.0 8 35.505114363509534 37.0 35.0 37.0 33.0 37.0 9 37.080465652998235 39.0 37.0 39.0 33.0 39.0 10 33.94114424926836 35.0 32.0 37.0 28.0 39.0 11 36.6542106054198 37.0 35.0 39.0 34.0 39.0 12 37.4868100103211 39.0 37.0 39.0 35.0 39.0 13 37.530126185091774 39.0 37.0 39.0 35.0 39.0 14 37.76602904189509 40.0 38.0 40.0 33.0 40.0 15 36.94390553120223 39.0 36.0 40.0 31.0 40.0 16 36.85573974643143 38.0 36.0 40.0 31.0 40.0 17 36.73506872995512 39.0 36.0 40.0 31.0 40.0 18 36.75723288591911 39.0 36.0 40.0 31.0 40.0 19 36.92046259711299 39.0 36.0 40.0 32.0 40.0 20 36.99943526042184 39.0 36.0 40.0 32.0 40.0 21 36.99397760914928 39.0 36.0 40.0 32.0 40.0 22 37.093559022775835 39.0 36.0 40.0 32.0 40.0 23 37.044605438776685 39.0 36.0 40.0 32.0 40.0 24 37.12970185645029 39.0 36.0 40.0 32.0 40.0 25 37.24855581958892 39.0 36.0 40.0 32.0 40.0 26 37.074194596975175 39.0 36.0 40.0 32.0 40.0 27 36.84769857387028 39.0 36.0 40.0 31.0 40.0 28 36.690677003414905 39.0 36.0 40.0 31.0 40.0 29 36.65707424952302 39.0 35.0 40.0 31.0 40.0 30 36.59243928050879 39.0 35.0 40.0 31.0 40.0 31 36.526227934086755 39.0 35.0 40.0 31.0 40.0 32 36.5017838480486 39.0 35.0 40.0 31.0 40.0 33 36.353627340785636 39.0 35.0 40.0 31.0 40.0 34 36.1226813096166 38.0 35.0 40.0 30.0 40.0 35 36.02407957684977 38.0 35.0 40.0 30.0 40.0 36 35.81508548739123 38.0 35.0 40.0 30.0 40.0 37 35.580807942105956 38.0 35.0 40.0 29.0 40.0 38 35.20391093392747 38.0 34.0 40.0 27.0 40.0 39 34.95395599824836 37.0 34.0 40.0 26.0 40.0 40 34.67346268249802 37.0 34.0 40.0 25.0 40.0 41 34.30228297597285 36.0 33.0 40.0 24.0 40.0 42 33.95268071541669 36.0 33.0 40.0 23.0 40.0 43 33.56262392688245 35.0 33.0 40.0 21.0 40.0 44 33.17539882548149 35.0 33.0 40.0 18.0 40.0 45 32.8525879902711 35.0 33.0 40.0 17.0 40.0 46 32.37491867200814 35.0 32.0 39.0 14.0 40.0 47 31.90531699067206 35.0 31.0 39.0 10.0 40.0 48 31.505462894212943 35.0 30.0 39.0 10.0 40.0 49 31.18040408589834 35.0 29.0 39.0 9.0 40.0 50 30.763728639387065 35.0 27.0 39.0 9.0 40.0 51 30.32527152189577 35.0 27.0 38.0 9.0 40.0 52 29.362568801109305 35.0 23.0 38.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 1.0 13 0.0 14 3.0 15 15.0 16 69.0 17 216.0 18 573.0 19 1107.0 20 2265.0 21 3981.0 22 6281.0 23 9613.0 24 13946.0 25 19895.0 26 27139.0 27 35832.0 28 47530.0 29 61164.0 30 74591.0 31 84328.0 32 93275.0 33 109735.0 34 144169.0 35 190428.0 36 238158.0 37 346739.0 38 419265.0 39 72374.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.27244864789561 21.188319927218004 37.64301368207708 7.8962177428093066 2 26.21649948344554 20.971312128219353 36.55233228457882 16.25985610375629 3 21.976059236238406 20.65024444585366 41.64822067086668 15.725475647041259 4 25.19702220959478 18.189258163882332 40.30757584911916 16.306143777403726 5 0.0 0.0 0.0 100.0 6 0.0 100.0 0.0 0.0 7 0.0 100.0 0.0 0.0 8 0.0 100.0 0.0 0.0 9 100.0 0.0 0.0 0.0 10 0.0 0.0 100.0 0.0 11 97.98770954909214 0.4802034061136679 1.4243321367778288 0.10775490801635597 12 98.71947422795206 0.883710084371394 0.22559623467001683 0.17121945300652672 13 94.2914865134097 3.663866603618228 1.146805825955351 0.897841057016727 14 47.3954819835092 32.38194770741197 11.758317425586448 8.464252883492378 15 28.04234098785985 37.53271220301863 21.56181701339147 12.86312979573005 16 38.59727876414408 23.77293973664461 21.855771204073715 15.774010295137597 17 27.878162054793222 23.52332584175408 21.755955605776823 26.84255649767588 18 20.141379632325073 35.998328251010015 25.84999298444644 18.010299132218467 19 25.4374984083931 32.38958742053825 29.3374471274429 12.835467043625759 20 20.873693571605834 34.70646774118649 27.932389038160117 16.48744964904756 21 26.286605086251363 34.76004559860149 18.057984923300776 20.89536439184638 22 25.795216740658706 34.512828476456455 18.65752763903404 21.034427143850806 23 19.537342967694 37.04132385742598 26.243513109597927 17.1778200652821 24 22.80174744706253 39.30787195041876 16.935346555862534 20.955034046656177 25 22.216086040146944 40.00263645002005 20.16185206619287 17.61942544364014 26 21.720353543953067 36.30057128077044 21.681555785135316 20.297519390141176 27 24.74667859726878 39.39630287817454 16.9901727324158 18.866845792140882 28 21.733835390646494 38.87096025202065 15.054029748943048 24.341174608389803 29 22.814680033335115 42.78159458289414 15.347185015376796 19.056540368393957 30 23.921240050272306 41.937730845416645 18.688935348553173 15.452093755757874 31 19.37665932821456 44.54237369382127 15.1014658761977 20.97950110176647 32 20.730037005172537 50.30990770926947 15.13117587168877 13.828879413869224 33 22.554929787041747 44.39472250614547 15.023920291327727 18.02642741548505 34 21.204098681125863 46.5066288242881 15.464477081609612 16.824795412976425 35 21.405028129623464 47.93535504443267 16.355826879107283 14.303789946836584 36 20.71056322661536 45.271791532701215 21.16280428403155 12.85484095665187 37 21.060392181927035 46.54352913801566 16.962310249249384 15.433768430807918 38 16.952473494439737 50.66253289945089 20.490010201264 11.894983404845377 39 17.831340100554605 48.07316947729882 21.154715176015497 12.940775246131084 40 19.086549960478216 46.534141778095794 16.628110249548982 17.751198011877005 41 20.481921093247944 49.150219229807064 14.156138759160791 16.211720917784202 42 18.85635991137933 49.09818928812354 14.345134276696427 17.7003165238007 43 19.2053899424425 47.384646573388935 16.156944673996463 17.2530188101721 44 20.08380715366759 47.21063088551266 17.14915865786718 15.556403302952573 45 22.261175327421626 42.59000256155087 20.559966005773227 14.588856105254274 46 24.165361340954405 42.91731183960797 17.781557133319982 15.135769686117643 47 22.815528890349146 42.278322239105044 17.321776228308583 17.584372642237227 48 23.01715739756418 41.87950924080725 18.17223109083619 16.93110227079238 49 22.1331477165996 44.694418964863814 15.739307023093405 17.433126295443184 50 19.836140636632773 45.79034330274286 16.645087389829595 17.728428670794774 51 19.370467665288686 45.47566701436516 19.651239605870696 15.50262571447546 52 24.54779639215796 42.25919798990659 17.760135976907094 15.432869641028354 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.5 4 1.0 5 22.0 6 43.0 7 57.5 8 72.0 9 839.0 10 1606.0 11 3070.5 12 4535.0 13 7766.5 14 12184.5 15 13371.0 16 12215.0 17 11059.0 18 13334.0 19 15609.0 20 21464.5 21 27320.0 22 38635.5 23 49951.0 24 66296.5 25 82642.0 26 95199.5 27 107757.0 28 105590.0 29 103423.0 30 91300.0 31 79177.0 32 72320.5 33 65464.0 34 63262.0 35 61060.0 36 60633.5 37 60207.0 38 61789.5 39 62034.5 40 60697.0 41 69706.0 42 78715.0 43 91405.5 44 104096.0 45 119850.0 46 135604.0 47 150479.0 48 165354.0 49 158748.0 50 152142.0 51 147910.5 52 143679.0 53 123533.0 54 103387.0 55 89082.0 56 74777.0 57 66912.5 58 59048.0 59 62849.0 60 66650.0 61 52753.5 62 38857.0 63 33741.5 64 20611.5 65 12597.0 66 11201.0 67 9805.0 68 7261.0 69 4717.0 70 4014.0 71 3311.0 72 2956.5 73 2602.0 74 1404.0 75 206.0 76 120.5 77 35.0 78 28.0 79 21.0 80 20.0 81 19.0 82 14.0 83 9.0 84 7.5 85 6.0 86 35.0 87 64.0 88 33.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2002693.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.761522957879393 #Duplication Level Percentage of deduplicated Percentage of total 1 82.21423456005247 25.290350638835356 2 7.639047632205655 4.69977478228857 3 2.6718632757763587 2.465717504943279 4 1.3660412070397798 1.6808603180705386 5 0.8794549302997218 1.3526686514417559 6 0.6105251288923306 1.1268409661270224 7 0.45773746586968594 0.9856491095522316 8 0.37577425145138466 0.924751061040137 9 0.3021028721603408 0.8363829993841465 >10 2.8663161382396494 18.639396988078584 >50 0.3390674973071355 7.077994226304164 >100 0.20704695860348288 13.371792086598989 >500 0.0453641934597889 9.89941474842483 >1k 0.025423888642299275 11.648405918910482 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTTCAAAGTGGGGAGGATAACTGATGCATCACCATCATCACCATGCTCCTG 4522 0.2257959657321417 No Hit GTGGCAAAGTGGGCTGATGAGCCAGTCCTGCTTGAAGAACCAGTAGTCTTGG 3896 0.19453805450960282 No Hit TACGCAAAGTGGGGGGGCTGGTGAGATGGCTCAGTGGTTTAGAGCACCCGAC 3274 0.16347987434918881 No Hit TCATCAAAGTGGGCGGGTGCAGTGGCTCACACTTGTTATCCCAGCTCTTTGG 3062 0.15289412805657182 No Hit TCGTCAAAGTAGGCATCAAAAAAAATGAAGAAGAACTCTAGATAATGTAGCC 2837 0.14165925581204908 No Hit GTTTCAAAGTGGGGAGGATAACTGATGCATCACCATCATCACCATGCTCCTG 2643 0.1319722992989939 No Hit GCTCCAAAGTGGTGTTAACGCAGAGTTATTCAAAGTGGGGCTACTTGGGAGG 2476 0.12363352745528146 No Hit GGTGCAAAGTGGGGATGCAGAGATGACCTGTGACTTGTAGGCAGTTAAAATT 2440 0.12183594789615783 No Hit TGTACAAAGTGGGACGCGCGGCGACATGGAAGACATCCGCGGCGTGACGATC 2403 0.11998843557150297 No Hit GGACCAAAGTGGGTGTATGACAGACACGTGTCTTTCCCCTAGGGAAGACATG 2367 0.11819085601237932 No Hit CAGGCAAAGTGGGGGACTCGACTCGGTCCTCCGCCCGCCCCGGGAATACCTC 2362 0.11794119218472326 No Hit AATCCAAAGTGGGAGACGCCGCCTCGGCGAGCCGGGCGCCGGGCAGGAACGC 2330 0.11634334368772449 No Hit TGCTCAAAGTTGGGGTTGTGGCAATAGCCCAGTATGCAGTCACTTAGAAATT 2310 0.11534468837710024 No Hit GATTCAAAGTGGGAGAGTGTGTCAAAGTGGGAAGCAGTATCAACGCAGAATC 2294 0.11454576412860083 No Hit GTTCCAAAGTGGGCGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCAAC 2290 0.11434603306647599 No Hit AGCTCAAAGTGGACAGCGGGTGTTGGCGGGTGTCGGGGCGCAGCCATGACCC 2217 0.11070094118269751 No Hit TGTTCAAAGTGGGGAGGATAACTGATGCATCACCATCATCACCATGCTCCTG 2144 0.10705584929891901 No Hit AAATCAAAGTGGGGAGTCATCCAAAGTGGGTCATGTAATTTAATGTGCCAAA 2118 0.10575759739510748 No Hit TCAGCAAAGTGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAG 2114 0.10555786633298263 No Hit CAGTCAAAGTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGATTG 2093 0.10450927825682718 No Hit TCAGCAAAGTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAA 2080 0.10386015230492143 No Hit CTGACAAAGTGGGGCTTCCTGTCCCGGCCGCCATCGGAGAGCATCAGCCATG 2077 0.1037103540083278 No Hit TTAGCAAAGTGGGGCAGTGGTATCAACGCAGCTACCTCTCCCCACGGGTGCA 2071 0.10341075741514051 No Hit AGTTCAAAGTGGGGGCTGGAGAGGTGGCTCAGAGGTTTAGAGCACTGGCTGT 2021 0.1009141191385799 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.05512577314645829 0.0 0.0 0.0 0.0 12 0.12113688917872086 0.0 0.0 0.0 0.0 13 0.17121945300652672 0.0 0.0 0.0 0.0 14 0.6126251003024428 0.0 0.0 0.0 0.0 15 1.1046126390814768 0.0 0.0 0.0 0.0 16 1.3093369777594468 0.0 0.0 0.0 0.0 17 1.4444550412869073 0.0 0.0 0.0 0.0 18 1.6298553997042982 0.0 0.0 0.0 0.0 19 1.7805025533119654 0.0 0.0 0.0 0.0 20 1.965054054715326 0.0 0.0 0.0 0.0 21 2.194994439986558 0.0 0.0 0.0 0.0 22 2.3898320910893482 0.0 0.0 0.0 0.0 23 2.570638635077868 0.0 0.0 0.0 0.0 24 2.7550403381846342 0.0 0.0 0.0 0.0 25 2.9628605083255395 0.0 0.0 0.0 0.0 26 3.209029042394416 0.0 0.0 0.0 0.0 27 3.4495551739582653 0.0 0.0 0.0 0.0 28 3.6828410545200887 0.0 0.0 0.0 0.0 29 4.018439171655366 0.0 0.0 0.0 0.0 30 4.400324962438077 0.0 0.0 0.0 0.0 31 4.706562613441002 0.0 0.0 0.0 0.0 32 4.9581238861872485 0.0 0.0 0.0 0.0 33 5.141726665045516 0.0 0.0 0.0 0.0 34 5.355139304925917 0.0 0.0 0.0 0.0 35 5.553322451319299 0.0 0.0 0.0 0.0 36 5.760443562742767 0.0 0.0 0.0 0.0 37 5.97066050562917 0.0 0.0 0.0 0.0 38 6.171839617954424 0.0 0.0 0.0 0.0 39 6.375115906431989 0.0 0.0 0.0 0.0 40 6.585981975270299 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGAATTT 150 0.0 46.000004 12 CACATTT 75 0.0 46.000004 19 TTAGATA 155 0.0 46.000004 31 GATCCCC 150 0.0 46.000004 13 TTCACGA 75 0.0 46.000004 20 CCGTGTC 145 0.0 46.000004 33 TTCACCG 150 0.0 46.000004 25 CAACCGT 150 0.0 46.000004 45 CCGTGAA 145 0.0 46.000004 34 TGAACCT 155 0.0 46.000004 21 ATGCTTA 75 0.0 46.000004 44 ATTAAGG 75 0.0 46.000004 44 TTCGTGT 75 0.0 46.000004 21 CTAAGTC 145 0.0 46.000004 19 GTTAGAA 75 0.0 46.000004 33 TAAGTCC 145 0.0 46.000004 20 ATGTCTA 75 0.0 46.000004 22 GTAATCT 150 0.0 46.000004 37 ATGTAAC 150 0.0 46.000004 44 TCTACGG 75 0.0 46.000004 17 >>END_MODULE