##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528160_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1989648 Sequences flagged as poor quality 0 Sequence length 52 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.31786929145256 31.0 31.0 33.0 27.0 33.0 2 31.31777429977564 31.0 31.0 34.0 30.0 34.0 3 31.755181821106046 31.0 31.0 34.0 30.0 34.0 4 35.63806210947866 37.0 35.0 37.0 33.0 37.0 5 35.77203455083512 37.0 35.0 37.0 35.0 37.0 6 35.89312782964625 37.0 35.0 37.0 35.0 37.0 7 35.76839672143012 37.0 35.0 37.0 35.0 37.0 8 35.49531826735181 37.0 35.0 37.0 33.0 37.0 9 37.06791502818589 39.0 37.0 39.0 33.0 39.0 10 33.88806210947866 35.0 32.0 37.0 28.0 39.0 11 36.64438031249749 37.0 35.0 39.0 34.0 39.0 12 37.50559998552508 39.0 37.0 39.0 35.0 39.0 13 37.529206673743296 39.0 37.0 39.0 35.0 39.0 14 37.71807324712713 40.0 38.0 40.0 33.0 40.0 15 36.93835995110693 39.0 36.0 40.0 31.0 40.0 16 36.84104525021511 38.0 36.0 40.0 31.0 40.0 17 36.74010779796225 39.0 36.0 40.0 31.0 40.0 18 36.6708121235515 39.0 36.0 40.0 31.0 40.0 19 36.91113604014378 39.0 36.0 40.0 32.0 40.0 20 36.999165681567796 39.0 36.0 40.0 32.0 40.0 21 37.04101026915313 39.0 36.0 40.0 32.0 40.0 22 37.09237412848906 39.0 36.0 40.0 32.0 40.0 23 37.14363847273488 39.0 36.0 40.0 32.0 40.0 24 37.26243838106037 39.0 36.0 40.0 32.0 40.0 25 37.29180940548278 39.0 36.0 40.0 32.0 40.0 26 36.97759503188504 39.0 36.0 40.0 31.0 40.0 27 36.722119691523325 39.0 36.0 40.0 31.0 40.0 28 36.608284480470914 39.0 35.0 40.0 30.0 40.0 29 36.571929306088315 39.0 35.0 40.0 31.0 40.0 30 36.39518698784911 39.0 35.0 40.0 30.0 40.0 31 36.38482636124581 39.0 35.0 40.0 30.0 40.0 32 36.451225543412704 39.0 35.0 40.0 30.0 40.0 33 36.40503797656671 39.0 35.0 40.0 31.0 40.0 34 36.2226253085973 38.0 35.0 40.0 30.0 40.0 35 35.94919955690655 38.0 35.0 40.0 30.0 40.0 36 35.78516903492477 38.0 35.0 40.0 30.0 40.0 37 35.55298927247433 38.0 35.0 40.0 29.0 40.0 38 35.23578190715141 38.0 34.0 40.0 27.0 40.0 39 34.987180144427555 37.0 34.0 40.0 27.0 40.0 40 34.647711555008726 37.0 34.0 40.0 25.0 40.0 41 34.255013449615205 36.0 33.0 40.0 24.0 40.0 42 33.901903251228354 36.0 33.0 40.0 22.0 40.0 43 33.54888000289498 35.0 33.0 40.0 21.0 40.0 44 33.073867337338065 35.0 33.0 40.0 17.0 40.0 45 32.742107146590754 35.0 33.0 40.0 15.0 40.0 46 32.255300937653296 35.0 31.0 39.0 14.0 40.0 47 31.919699363907586 35.0 31.0 39.0 10.0 40.0 48 31.519225008644746 35.0 30.0 39.0 10.0 40.0 49 31.010012323787926 35.0 28.0 39.0 9.0 40.0 50 30.596970921489632 35.0 27.0 38.0 9.0 40.0 51 30.172384260934596 35.0 26.0 38.0 9.0 40.0 52 28.993084706440538 34.0 23.0 37.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 2.0 14 7.0 15 30.0 16 71.0 17 198.0 18 538.0 19 1176.0 20 2264.0 21 3896.0 22 6356.0 23 9678.0 24 14020.0 25 20224.0 26 27403.0 27 36387.0 28 47481.0 29 61137.0 30 75071.0 31 84509.0 32 92867.0 33 110297.0 34 142946.0 35 189465.0 36 237105.0 37 347337.0 38 415728.0 39 63453.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.32056725611767 21.196714192661215 37.59966587054595 7.883052680675175 2 26.21860751248462 20.95129389721197 36.533095301279424 16.297003289023987 3 21.921616285895798 20.639680988798016 41.692450121830596 15.746252603475588 4 25.18641488343667 18.149843590424034 40.41262575088659 16.251115775252707 5 0.0 0.0 0.0 100.0 6 0.0 100.0 0.0 0.0 7 0.0 100.0 0.0 0.0 8 0.0 100.0 0.0 0.0 9 100.0 0.0 0.0 0.0 10 0.0 0.0 100.0 0.0 11 98.00331515926435 0.484407292144138 1.3981870159947891 0.11409053259672064 12 98.750231196674 0.8613081308854631 0.22310479039508493 0.16535588204546733 13 94.33186171624327 3.646624930640998 1.132913962670784 0.8885993904449431 14 47.28318777994902 32.4879576688942 11.779470539512516 8.44938401164427 15 28.00937653293447 37.63675785867651 21.48510691338367 12.868758695005347 16 38.65005267263355 23.773551904658515 21.86261087388322 15.713784548824716 17 27.811954677410277 23.461587175218934 21.807023151833892 26.9194349955369 18 20.075510844129212 36.0872878016614 25.774106776676074 18.063094577533313 19 25.455105626723924 32.41407525351218 29.317547626514838 12.813271493249056 20 20.812575892821243 34.77851358632281 27.946249788907384 16.462660731948567 21 26.29510345548559 34.79866790507668 18.055203734529925 20.851024904907803 22 25.814767235209445 34.474389439740094 18.683355045716628 21.02748827933383 23 19.470981801806147 37.059721116499 26.35109325870707 17.118203822987784 24 22.833636904618302 39.4060155364165 16.81724606563573 20.943101493329475 25 22.15532596720626 40.001698792952325 20.195733114601175 17.647242125240243 26 21.59246258634693 36.35643088626732 21.70780962260661 20.343296904779137 27 24.68954307495597 39.40445747187442 17.01607520526244 18.889924247907167 28 21.63528423118059 38.96040907738455 14.967672673759377 24.436634017675487 29 22.767544811946635 42.82089093146124 15.291448537630778 19.120115718961344 30 23.85889363344672 42.01310985661785 18.72672955216199 15.401266957773435 31 19.260542568333694 44.62729085747831 15.099253737344496 21.012912836843505 32 20.657975682130708 50.52944038342461 15.042861852950873 13.769722081493812 33 22.569168013638592 44.56366151198604 14.847249362701342 18.019921111674027 34 21.196211591196032 46.672929080922856 15.376840526565502 16.75401880131561 35 21.28436788818927 47.97888872805642 16.466983104549147 14.269760279205165 36 20.686221884474037 45.340934677892776 21.166809405482777 12.806034032150409 37 21.096847281529197 46.59276414722604 16.874793933399275 15.435594637845487 38 16.953300282260983 50.757822489204116 20.464172557155837 11.824704671379058 39 17.866074803181267 48.18123607793942 21.086342910906854 12.866346207972464 40 19.01693163815911 46.657097134769565 16.57257967238426 17.75339155468706 41 20.482014909169862 49.327117158411944 14.061230931300411 16.129637001117786 42 18.823329553770314 49.31977917702026 14.241916158033984 17.614975111175443 43 19.222344856979728 47.50704647254187 16.06248944536923 17.208119225109165 44 20.012786181274276 47.34938039291372 17.113981970680243 15.523851455131762 45 22.250016083246884 42.67694587183261 20.52408265180575 14.548955393114763 46 24.152714449993166 43.005848270648876 17.741178339083095 15.100258940274863 47 22.88751578168601 42.400314025395446 17.14353493683305 17.5686352560855 48 22.977179883074793 42.06824523734852 18.084103318777995 16.870471560798695 49 22.08641930632956 44.659758912129185 15.887282574606163 17.366539206935098 50 19.825265574614203 45.891233022122506 16.602936800881363 17.680564602381928 51 19.31653237155517 45.53895965517519 19.682577018648526 15.46193095462112 52 24.674263990414385 42.17605325163044 17.762840462232514 15.38684229572266 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 2.0 4 4.0 5 22.5 6 41.0 7 62.5 8 84.0 9 817.5 10 1551.0 11 3001.0 12 4451.0 13 7652.0 14 12029.0 15 13205.0 16 12110.0 17 11015.0 18 13350.0 19 15685.0 20 21240.5 21 26796.0 22 38202.0 23 49608.0 24 65853.5 25 82099.0 26 94779.5 27 107460.0 28 105542.0 29 103624.0 30 91316.5 31 79009.0 32 72523.0 33 66037.0 34 63460.0 35 60883.0 36 60388.5 37 59894.0 38 61718.0 39 61757.0 40 59972.0 41 69241.0 42 78510.0 43 91072.5 44 103635.0 45 119352.5 46 135070.0 47 149900.5 48 164731.0 49 157608.5 50 150486.0 51 146085.5 52 141685.0 53 121782.5 54 101880.0 55 87856.0 56 73832.0 57 65977.5 58 58123.0 59 61857.5 60 65592.0 61 52307.0 62 39022.0 63 33730.5 64 20473.5 65 12508.0 66 10964.5 67 9421.0 68 7028.0 69 4635.0 70 3993.5 71 3352.0 72 2979.5 73 2607.0 74 1397.0 75 187.0 76 109.0 77 31.0 78 25.0 79 19.0 80 17.0 81 15.0 82 8.5 83 2.0 84 4.5 85 7.0 86 25.5 87 44.0 88 23.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1989648.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.31098727484951 #Duplication Level Percentage of deduplicated Percentage of total 1 82.47340074562318 25.82323601259772 2 7.576870383526292 4.744785843235517 3 2.6361096765875986 2.476175896162259 4 1.3503059802080224 1.6911765345378633 5 0.8408149189724313 1.316337261422471 6 0.6081363626462827 1.1424809947314616 7 0.4463797730425893 0.978361397544071 8 0.36038925863695803 0.9027314792939395 9 0.296789347496012 0.836349073448267 >10 2.812452367110781 18.666371864519423 >50 0.32779964665319455 6.9884852842199985 >100 0.20143974392848105 13.18753767284799 >500 0.04536485159342367 10.11568577042577 >1k 0.023746943974896868 11.130284915013334 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTTCAAAGTGGGGAGGATAACTGATGCATCACCATCATCACCATGCTCCTG 4497 0.22601987889315098 No Hit GTGGCAAAGTGGGCTGATGAGCCAGTCCTGCTTGAAGAACCAGTAGTCTTGG 3901 0.19606483156819698 No Hit TACGCAAAGTGGGGGGGCTGGTGAGATGGCTCAGTGGTTTAGAGCACCCGAC 3391 0.17043215684382362 No Hit TCATCAAAGTGGGCGGGTGCAGTGGCTCACACTTGTTATCCCAGCTCTTTGG 2973 0.14942341559914116 No Hit TCGTCAAAGTAGGCATCAAAAAAAATGAAGAAGAACTCTAGATAATGTAGCC 2870 0.1442466205077481 No Hit GTTTCAAAGTGGGGAGGATAACTGATGCATCACCATCATCACCATGCTCCTG 2702 0.13580291589266041 No Hit TGTACAAAGTGGGACGCGCGGCGACATGGAAGACATCCGCGGCGTGACGATC 2426 0.12193111545358776 No Hit GGACCAAAGTGGGTGTATGACAGACACGTGTCTTTCCCCTAGGGAAGACATG 2358 0.11851342549033798 No Hit CAGGCAAAGTGGGGGACTCGACTCGGTCCTCCGCCCGCCCCGGGAATACCTC 2350 0.11811134431819095 No Hit GGTGCAAAGTGGGGATGCAGAGATGACCTGTGACTTGTAGGCAGTTAAAATT 2346 0.11791030373211744 No Hit GTTCCAAAGTGGGCGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCAAC 2328 0.11700562109478663 No Hit AATCCAAAGTGGGAGACGCCGCCTCGGCGAGCCGGGCGCCGGGCAGGAACGC 2318 0.11650301962960283 No Hit GCTCCAAAGTGGTGTTAACGCAGAGTTATTCAAAGTGGGGCTACTTGGGAGG 2303 0.11574911743182713 No Hit GATTCAAAGTGGGAGAGTGTGTCAAAGTGGGAAGCAGTATCAACGCAGAATC 2227 0.11192934629643034 No Hit TCAGCAAAGTGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAG 2221 0.11162778541732005 No Hit TGCTCAAAGTTGGGGTTGTGGCAATAGCCCAGTATGCAGTCACTTAGAAATT 2220 0.11157752527080167 No Hit TGTTCAAAGTGGGGAGGATAACTGATGCATCACCATCATCACCATGCTCCTG 2220 0.11157752527080167 No Hit AGCTCAAAGTGGACAGCGGGTGTTGGCGGGTGTCGGGGCGCAGCCATGACCC 2160 0.10856191647969891 No Hit TCAGCAAAGTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAA 2090 0.10504370622341239 No Hit AAATCAAAGTGGGGAGTCATCCAAAGTGGGTCATGTAATTTAATGTGCCAAA 2089 0.10499344607689401 No Hit TTTTCAAAGTGGGGAAACAAACAAAGCCTCCAAGAAATATGGGACTATGTGA 2071 0.10408876343956318 No Hit CTGACAAAGTGGGGCTTCCTGTCCCGGCCGCCATCGGAGAGCATCAGCCATG 2020 0.10152549596712585 No Hit GTAACAAAGTGAGGGAGAATCGCTTGAACCCGGGAGGTGGAGGTTGCAGTGA 2014 0.10122393508801557 No Hit AGTTCAAAGTGGGGGCTGGAGAGGTGGCTCAGAGGTTTAGAGCACTGGCTGT 2006 0.10082185391586854 No Hit CAGTCAAAGTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGATTG 2004 0.10072133362283178 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.056341624247103005 0.0 0.0 0.0 0.0 12 0.11997096973937098 0.0 0.0 0.0 0.0 13 0.1741011475396653 0.0 0.0 0.0 0.0 14 0.6064891880372809 0.0 0.0 0.0 0.0 15 1.0857699452365444 0.0 0.0 0.0 0.0 16 1.2835938819328847 0.0 0.0 0.0 0.0 17 1.4076359235402442 0.0 0.0 0.0 0.0 18 1.5903315561345523 0.0 0.0 0.0 0.0 19 1.7393528905615465 0.0 0.0 0.0 0.0 20 1.919686296269491 0.0 0.0 0.0 0.0 21 2.1492243854189286 0.0 0.0 0.0 0.0 22 2.342173087902986 0.0 0.0 0.0 0.0 23 2.5164752760287246 0.0 0.0 0.0 0.0 24 2.694949056315489 0.0 0.0 0.0 0.0 25 2.9040815259784645 0.0 0.0 0.0 0.0 26 3.14020369432181 0.0 0.0 0.0 0.0 27 3.3826083809799523 0.0 0.0 0.0 0.0 28 3.6184792485907056 0.0 0.0 0.0 0.0 29 3.9416017305573647 0.0 0.0 0.0 0.0 30 4.323578844097046 0.0 0.0 0.0 0.0 31 4.6350912322179605 0.0 0.0 0.0 0.0 32 4.897449197043899 0.0 0.0 0.0 0.0 33 5.090096338648847 0.0 0.0 0.0 0.0 34 5.304003522231068 0.0 0.0 0.0 0.0 35 5.496097802224313 0.0 0.0 0.0 0.0 36 5.701008419579745 0.0 0.0 0.0 0.0 37 5.90240082667889 0.0 0.0 0.0 0.0 38 6.1006771046938955 0.0 0.0 0.0 0.0 39 6.299405724027567 0.0 0.0 0.0 0.0 40 6.505019983434256 0.0 5.026014651837913E-5 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCACTA 70 0.0 46.000004 43 CCTTAAG 35 1.0200711E-7 46.000004 41 CCGGGCC 155 0.0 46.000004 28 TACTTTG 140 0.0 46.000004 27 GTCTGTA 35 1.0200711E-7 46.000004 24 CTCCGTA 75 0.0 46.000004 35 GTACAGT 35 1.0200711E-7 46.000004 16 TGCCATT 70 0.0 46.000004 22 TTTACAC 35 1.0200711E-7 46.000004 24 CCCTAGT 35 1.0200711E-7 46.000004 23 GACGTTG 35 1.0200711E-7 46.000004 44 TTAGATA 140 0.0 46.000004 31 TAGGTGC 35 1.0200711E-7 46.000004 10 GACAATT 140 0.0 46.000004 33 ATAGCTA 155 0.0 46.000004 46 CCGTGTC 145 0.0 46.000004 33 TTCACCG 145 0.0 46.000004 25 CCAATCC 35 1.0200711E-7 46.000004 18 AGGACGT 35 1.0200711E-7 46.000004 19 GAATCAC 70 0.0 46.000004 27 >>END_MODULE