##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528159_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1891052 Sequences flagged as poor quality 0 Sequence length 59 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.959162413302227 31.0 30.0 31.0 27.0 33.0 2 30.932159982908985 31.0 31.0 33.0 28.0 34.0 3 31.3976331692624 31.0 31.0 34.0 30.0 34.0 4 35.36313755518093 37.0 35.0 37.0 33.0 37.0 5 35.36009586198581 37.0 35.0 37.0 33.0 37.0 6 35.581692623999764 37.0 35.0 37.0 33.0 37.0 7 35.382050837311716 37.0 35.0 37.0 33.0 37.0 8 35.08119871901989 37.0 35.0 37.0 32.0 37.0 9 36.698124641733806 39.0 35.0 39.0 32.0 39.0 10 33.24394516914395 35.0 32.0 37.0 27.0 39.0 11 36.007437130232276 37.0 35.0 39.0 32.0 39.0 12 37.02978024930039 39.0 37.0 39.0 34.0 39.0 13 37.13389637090889 39.0 37.0 39.0 34.0 39.0 14 36.94127871682006 39.0 36.0 40.0 31.0 40.0 15 36.11736324543164 38.0 35.0 40.0 30.0 40.0 16 35.860604044732774 38.0 34.0 40.0 30.0 40.0 17 35.96582801530577 38.0 35.0 40.0 30.0 40.0 18 36.0387297652312 38.0 35.0 40.0 30.0 40.0 19 36.3498941330011 38.0 35.0 40.0 30.0 40.0 20 36.3158199774517 38.0 35.0 40.0 30.0 40.0 21 36.29364184591434 38.0 35.0 40.0 30.0 40.0 22 36.29567722093311 38.0 35.0 40.0 30.0 40.0 23 36.26081567296933 38.0 35.0 40.0 30.0 40.0 24 36.35379883789552 38.0 35.0 40.0 30.0 40.0 25 36.39976425820125 38.0 35.0 40.0 30.0 40.0 26 36.04990449760239 38.0 35.0 40.0 30.0 40.0 27 35.76840827222097 38.0 35.0 40.0 28.0 40.0 28 35.61366001569497 38.0 34.0 40.0 27.0 40.0 29 35.49832368438308 38.0 34.0 40.0 27.0 40.0 30 35.37436622578332 38.0 34.0 40.0 27.0 40.0 31 35.32337714668872 38.0 34.0 40.0 27.0 40.0 32 35.31553230688527 38.0 34.0 40.0 27.0 40.0 33 35.04926041166504 38.0 34.0 40.0 26.0 40.0 34 34.78351256337742 37.0 33.0 40.0 25.0 40.0 35 34.68052332775619 37.0 33.0 40.0 25.0 40.0 36 34.315118780446014 37.0 33.0 40.0 24.0 40.0 37 34.22968273743927 37.0 33.0 40.0 24.0 40.0 38 33.959190968836396 36.0 33.0 39.0 23.0 40.0 39 33.640747055078336 36.0 33.0 39.0 23.0 40.0 40 33.39006912554493 35.0 33.0 39.0 22.0 40.0 41 32.95467126234498 35.0 32.0 39.0 20.0 40.0 42 32.689171952965864 35.0 31.0 39.0 18.0 40.0 43 32.33964534026563 35.0 31.0 39.0 17.0 40.0 44 31.956160909377427 35.0 31.0 39.0 15.0 40.0 45 31.66514617260657 35.0 30.0 38.0 13.0 40.0 46 31.124689326364372 35.0 29.0 38.0 10.0 40.0 47 30.63925529282114 35.0 27.0 38.0 10.0 40.0 48 30.237910961729238 35.0 26.0 38.0 9.0 40.0 49 29.814271632932357 34.0 24.0 38.0 9.0 40.0 50 29.20513238134118 34.0 23.0 37.0 9.0 40.0 51 28.775634937590294 33.0 22.0 37.0 8.0 40.0 52 27.9737913076954 33.0 20.0 37.0 8.0 40.0 53 27.617684230787944 33.0 19.0 36.0 8.0 39.0 54 27.252070805033387 33.0 18.0 36.0 8.0 39.0 55 26.897821424265434 33.0 15.0 36.0 8.0 39.0 56 26.348780995974728 32.0 13.0 36.0 8.0 39.0 57 25.81928365798508 32.0 10.0 35.0 8.0 39.0 58 25.292533996949846 31.0 10.0 35.0 8.0 38.0 59 24.52522881443768 30.0 10.0 35.0 8.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 1.0 14 20.0 15 89.0 16 318.0 17 960.0 18 2169.0 19 4338.0 20 7659.0 21 12123.0 22 18198.0 23 25313.0 24 34274.0 25 44679.0 26 57133.0 27 69286.0 28 77827.0 29 81986.0 30 91445.0 31 106496.0 32 124133.0 33 143040.0 34 165945.0 35 180938.0 36 202374.0 37 225907.0 38 201784.0 39 12616.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.74021444148548 21.677457838282606 36.74013194772011 7.842195772511808 2 25.887019500257004 21.442773651914386 36.19715375357209 16.473053094256528 3 21.833191260737408 20.95970919890093 41.53021704321193 15.676882497149736 4 25.327331030558653 18.360097977210568 40.02142722674998 16.2911437654808 5 0.0 0.0 0.0 100.0 6 0.0 100.0 0.0 0.0 7 0.0 100.0 0.0 0.0 8 0.0 100.0 0.0 0.0 9 100.0 0.0 0.0 0.0 10 0.0 0.0 100.0 0.0 11 98.0640934252469 0.4957029209138617 1.3237605311752398 0.11644312266399866 12 98.71939005379016 0.8751213610202152 0.22738666096966134 0.178101924219958 13 94.29095551047777 3.6894278951610002 1.1585085973310094 0.8611079970302243 14 47.03434913476732 32.71327282380389 11.833889284905966 8.418488756522823 15 27.93334080712746 37.758982830720676 21.63383132774773 12.67384503440413 16 38.5059215716966 23.47598056531497 22.200394277894 15.817703585094433 17 27.634142265786448 23.17630609840449 21.82938385618164 27.360167779627425 18 19.905322540046495 36.26674464795257 25.77062925821183 18.057303553789108 19 25.581475284656367 32.211277109249245 29.50479415690314 12.702453449191244 20 20.599645065286413 34.56806052927154 28.431793520220488 16.400500885221557 21 26.37151172997887 34.430200755981325 18.321283602989237 20.87700391105057 22 25.904575865708612 34.16384107893384 18.84268650465455 21.088896550702994 23 19.218879227012266 36.96254783051973 26.869329875645935 16.949243066822063 24 22.51720206530545 39.626303242851066 17.025285396699825 20.831209295143655 25 22.106319656995154 40.050934612057205 20.328155968212403 17.514589762735238 26 21.339286280863774 36.41158466292836 21.95783087932008 20.291298176887786 27 24.526612700232462 39.700230347975626 17.028458233829635 18.744698717962276 28 21.38978727184657 39.31679298083818 14.711070874835805 24.582348872479447 29 22.55871335108712 43.18178453051529 15.004346786867838 19.255155331529753 30 23.6594763126556 42.51538297201769 18.50139499072474 15.323745724601967 31 18.931790347383362 45.35909113022804 14.8092701840034 20.899848338385198 32 20.404462701184315 51.60260003426664 14.646768042338337 13.346169222210705 33 22.422704399455963 45.41646660165876 14.599915814054823 17.560913184830454 34 20.721482011071085 47.74305518832904 15.18324192037025 16.35222088022963 35 21.117980891059577 49.01335341386699 16.03974930356225 13.828916391511182 36 20.275169588144585 46.21147382515129 21.18328845531482 12.3300681313893 37 20.707891692031737 47.71666775953279 16.494998551071046 15.08044199736443 38 16.522655114719214 51.96848103595247 20.06248373920971 11.4463801101186 39 17.42850011527975 49.414029862743064 20.68864314677756 12.468826875199625 40 18.579076619786235 48.018404570577644 15.96767302009675 17.43484578953937 41 19.823093177765603 50.77020621326119 13.610519435742646 15.796181173230561 42 18.176919513582916 50.98543033189992 13.692854559261194 17.144795595255975 43 18.517206295754956 49.24735015219042 15.477311041684736 16.75813251036989 44 19.39222189553751 49.12810435672842 16.380935056254405 15.098738691479664 45 21.58925296607391 44.101642895065815 20.075069326491285 14.234034812368987 46 23.63811254264822 44.17710353813645 17.36377423783164 14.821009681383696 47 22.39753322489281 43.5065772913701 16.666701920412553 17.42918756332454 48 22.487324515666412 43.1400617222583 17.616543595839776 16.756070166235514 49 21.662915668104315 45.79842331146896 15.384505555637814 17.15415546478891 50 19.0281388348919 47.248832924742416 16.24249359615706 17.48053464420862 51 18.517417818230275 46.71405122651308 19.499728193619212 15.268802761637437 52 22.99503133705472 44.05500218925762 17.6321962590135 15.317770214674159 53 22.10161328191927 45.587746926049626 16.308911653407733 16.00172813862337 54 18.510860621495336 45.73872109280971 19.001063958050864 16.749354327644085 55 20.40874603130956 44.600095608158846 17.72716985043246 17.26398851009914 56 20.737240435482473 41.729259692488625 20.406736567794013 17.126763304234892 57 22.733325154464286 40.092868942789515 18.585739577758833 18.588066324987363 58 21.604059539346355 41.211188269809604 19.159600053303663 18.025152137540374 59 22.19394284239672 38.725693423554716 19.33072173583804 19.74964199821052 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 2.5 4 15.0 5 25.0 6 45.5 7 66.0 8 621.5 9 2210.0 10 3243.0 11 5577.0 12 7911.0 13 8721.0 14 8217.0 15 6903.0 16 7524.0 17 8145.0 18 9357.0 19 13117.5 20 15666.0 21 21368.0 22 27070.0 23 36997.0 24 46924.0 25 56019.5 26 70893.0 27 76671.0 28 80439.5 29 84208.0 30 83608.5 31 81474.5 32 79940.0 33 77991.0 34 76042.0 35 73227.5 36 69453.0 37 68493.0 38 66027.0 39 63561.0 40 65144.0 41 66727.0 42 71446.5 43 85855.5 44 95545.0 45 102227.0 46 108909.0 47 115496.0 48 116141.0 49 110199.0 50 104138.5 51 98078.0 52 90462.5 53 78878.5 54 74910.0 55 68985.0 56 63060.0 57 58866.5 58 48347.0 59 42021.0 60 34868.5 61 27716.0 62 26482.5 63 25249.0 64 20073.0 65 14233.0 66 13569.0 67 8877.0 68 4185.0 69 2603.0 70 1742.0 71 2463.0 72 1996.0 73 1529.0 74 926.0 75 209.0 76 95.0 77 60.0 78 25.0 79 18.5 80 12.0 81 10.0 82 10.0 83 12.0 84 16.5 85 21.0 86 16.5 87 10.5 88 9.0 89 5.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 1891052.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.37545173181644 #Duplication Level Percentage of deduplicated Percentage of total 1 89.20750983174916 41.37038566317825 2 5.092682959764851 4.723509455720379 3 1.658620652421099 2.3075784602324574 4 0.8668511686629126 1.6080245812398228 5 0.5273585252860542 1.2228244917382656 6 0.3493801346139675 0.9721596941307349 7 0.26501664009115283 0.8603186480472801 8 0.19882308171364532 0.7376408183345724 9 0.1563826030463578 0.6527082473344958 >10 1.3897157152067126 13.815016109969344 >50 0.15079694547114336 4.741352609294388 >100 0.09712395724607205 10.039312361781201 >500 0.027612357967338838 9.011685589651448 >1k 0.012125426759570531 7.937483269347389 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTGGCAAAGTGGGCTGATGAGCCAGTCCTGCTTGAAGAACCAGTAGTCTTGGCACTAGC 3165 0.16736715859743675 No Hit TACGCAAAGTGGGGGGGCTGGTGAGATGGCTCAGTGGTTTAGAGCACCCGACTGCTCTT 3088 0.16329535094751493 No Hit TCGTCAAAGTAGGCATCAAAAAAAATGAAGAAGAACTCTAGATAATGTAGCCATATTCC 2547 0.13468693616040173 No Hit TCATCAAAGTGGGCGGGTGCAGTGGCTCACACTTGTTATCCCAGCTCTTTGGGAGGCCG 2395 0.12664908209821835 No Hit GCTCCAAAGTGGTGTTAACGCAGAGTTATTCAAAGTGGGGCTACTTGGGAGGCTGAGGC 2382 0.12596163405342634 No Hit GGACCAAAGTGGGTGTATGACAGACACGTGTCTTTCCCCTAGGGAAGACATGACGTTAC 2271 0.12009188536327928 No Hit GGTTCAAAGTGGGGAGGATAACTGATGCATCACCATCATCACCATGCTCCTGGTATGAA 2252 0.11908715360550634 No Hit GGTGCAAAGTGGGGATGCAGAGATGACCTGTGACTTGTAGGCAGTTAAAATTACTTAGG 2233 0.11808242184773343 No Hit TCAGCAAAGTGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGAGGCAG 2137 0.11300588244003867 No Hit GTTCCAAAGTGGGCGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCAACTGCTCTT 2036 0.10766493993819312 No Hit CAGGCAAAGTGGGGGACTCGACTCGGTCCTCCGCCCGCCCCGGGAATACCTCTAGCTCT 2025 0.10708325313106146 No Hit TCAGCAAAGTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAA 1940 0.10258840053049836 No Hit TGTACAAAGTGGGACGCGCGGCGACATGGAAGACATCCGCGGCGTGACGATCAACTCGT 1937 0.1024297586740079 No Hit GATTCAAAGTGGGAGAGTGTGTCAAAGTGGGAAGCAGTATCAACGCAGAATCGCCCAAA 1937 0.1024297586740079 No Hit CAGTCAAAGTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGATTGCTCTTCT 1928 0.10195383310453651 No Hit AAATCAAAGTGGGGAGTCATCCAAAGTGGGTCATGTAATTTAATGTGCCAAATAAGCCT 1907 0.1008433401091033 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.04854440808608119 0.0 0.0 0.0 0.0 12 0.10491514775902513 0.0 0.0 0.0 0.0 13 0.154041242652238 0.0 0.0 0.0 0.0 14 0.5326664734761392 0.0 0.0 0.0 0.0 15 0.9400058803248139 0.0 0.0 0.0 0.0 16 1.1127668620429263 0.0 0.0 0.0 0.0 17 1.2258256251017952 0.0 0.0 0.0 0.0 18 1.3851549296370487 0.0 0.0 0.0 0.0 19 1.5116453698787764 0.0 0.0 0.0 0.0 20 1.668965210898484 0.0 0.0 0.0 0.0 21 1.860498812301301 0.0 0.0 0.0 0.0 22 2.019299310648253 0.0 0.0 0.0 0.0 23 2.1666775953278914 0.0 0.0 0.0 0.0 24 2.3274875571903895 0.0 0.0 0.0 0.0 25 2.49950821024488 0.0 0.0 0.0 0.0 26 2.6977576502391263 0.0 0.0 0.0 0.0 27 2.899444330457333 0.0 0.0 0.0 0.0 28 3.0939921271334687 0.0 0.0 0.0 0.0 29 3.3694472706197396 0.0 0.0 0.0 0.0 30 3.6947159570440156 0.0 0.0 0.0 0.0 31 3.9599651410960672 0.0 0.0 0.0 0.0 32 4.173232676838078 0.0 0.0 0.0 0.0 33 4.333936877462915 0.0 0.0 0.0 0.0 34 4.50780835217646 0.0 0.0 0.0 0.0 35 4.671791151168767 0.0 0.0 0.0 0.0 36 4.8445521328868795 0.0 0.0 0.0 0.0 37 5.023605908245781 0.0 0.0 0.0 0.0 38 5.196472651201553 0.0 0.0 0.0 0.0 39 5.363205242373028 0.0 0.0 0.0 0.0 40 5.53929770307744 0.0 0.0 0.0 0.0 41 5.716500656777286 0.0 0.0 0.0 0.0 42 5.906712242709349 0.0 0.0 0.0 0.0 43 6.088568690866248 0.0 0.0 0.0 0.0 44 6.258738522261683 0.0 0.0 0.0 0.0 45 6.4267931289039115 0.0 0.0 0.0 0.0 46 6.582738073834035 0.0 0.0 0.0 0.0 47 6.7295875523253725 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTTAAC 20 3.1387628E-4 53.000004 16 AGGTACT 45 7.6397555E-11 53.000004 39 GTTTCTT 20 3.1387628E-4 53.000004 33 TACTTAC 45 7.6397555E-11 53.000004 31 TAGACTT 20 3.1387628E-4 53.000004 36 TTTAACG 155 0.0 53.000004 49 CATGACT 90 0.0 53.000004 45 ATTACTC 20 3.1387628E-4 53.000004 44 TTCACGA 80 0.0 53.000004 20 ACATTAG 150 0.0 53.000004 35 CCTACAC 160 0.0 53.000004 32 TAAGTTA 20 3.1387628E-4 53.000004 37 ATTCGGC 20 3.1387628E-4 53.000004 28 TAAGTGT 90 0.0 53.000004 14 TAACGTT 160 0.0 53.000004 51 CTAAGCT 20 3.1387628E-4 53.000004 31 CACTGAA 20 3.1387628E-4 53.000004 46 CGACACC 20 3.1387628E-4 53.000004 16 TACATGT 20 3.1387628E-4 53.000004 31 TATTGGC 90 0.0 53.000004 25 >>END_MODULE