##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528158_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 574408 Sequences flagged as poor quality 0 Sequence length 52 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.19333818470495 31.0 30.0 31.0 28.0 33.0 2 30.827296973579756 31.0 31.0 33.0 28.0 33.0 3 31.44884994637958 31.0 31.0 34.0 30.0 34.0 4 35.34961038147101 37.0 35.0 37.0 33.0 37.0 5 35.489362961518644 37.0 35.0 37.0 33.0 37.0 6 31.745036629016308 33.0 32.0 35.0 27.0 35.0 7 34.09913336861604 35.0 33.0 35.0 32.0 37.0 8 34.889799584963995 35.0 35.0 37.0 32.0 37.0 9 36.65337181933399 39.0 35.0 39.0 32.0 39.0 10 32.82881679920892 34.0 31.0 37.0 27.0 37.0 11 36.35978781632568 37.0 35.0 39.0 34.0 39.0 12 37.34774237127617 39.0 37.0 39.0 35.0 39.0 13 37.46577693903985 39.0 37.0 39.0 35.0 39.0 14 37.46538523140346 40.0 37.0 40.0 32.0 40.0 15 36.56362028384006 38.0 36.0 40.0 31.0 40.0 16 36.6704363448977 38.0 36.0 40.0 31.0 40.0 17 36.5184015542959 38.0 36.0 40.0 31.0 40.0 18 36.699882313616804 38.0 36.0 40.0 31.0 40.0 19 36.82276361053467 39.0 36.0 40.0 31.0 40.0 20 37.03911157226222 39.0 36.0 40.0 32.0 40.0 21 36.95636551022966 39.0 36.0 40.0 31.0 40.0 22 37.100783763457336 39.0 36.0 40.0 31.0 40.0 23 36.88970383420844 39.0 35.0 40.0 31.0 40.0 24 36.97052965836131 39.0 36.0 40.0 31.0 40.0 25 36.920955139900556 39.0 35.0 40.0 31.0 40.0 26 36.72955286138076 39.0 35.0 40.0 31.0 40.0 27 36.22578724530299 38.0 35.0 40.0 30.0 40.0 28 35.958992562777674 38.0 35.0 40.0 30.0 40.0 29 35.8862655116224 38.0 35.0 40.0 30.0 40.0 30 35.878138883859556 38.0 35.0 40.0 30.0 40.0 31 35.76831102630882 38.0 35.0 40.0 30.0 40.0 32 35.59938406150332 38.0 35.0 40.0 30.0 40.0 33 35.43059462960126 38.0 35.0 40.0 29.0 40.0 34 35.191771354159414 37.0 34.0 40.0 27.0 40.0 35 35.093745212462224 37.0 34.0 40.0 27.0 40.0 36 34.830054595339895 37.0 34.0 40.0 26.0 40.0 37 34.44497117031796 36.0 33.0 40.0 25.0 40.0 38 33.93866728875643 35.0 33.0 39.0 24.0 40.0 39 33.41052004846729 35.0 33.0 39.0 22.0 40.0 40 32.890812802050114 35.0 33.0 39.0 20.0 40.0 41 32.30101774348547 35.0 32.0 38.0 17.0 40.0 42 31.669733012075042 35.0 31.0 38.0 14.0 40.0 43 31.179795546023037 35.0 31.0 38.0 10.0 40.0 44 30.668133103995768 35.0 29.0 37.0 10.0 40.0 45 30.306658333449395 35.0 27.0 37.0 9.0 40.0 46 29.871603459561843 35.0 26.0 36.0 9.0 40.0 47 29.34826290720185 34.0 24.0 36.0 8.0 39.0 48 28.936858469937743 34.0 23.0 35.0 8.0 39.0 49 28.612413127950862 34.0 23.0 35.0 8.0 39.0 50 28.178784069859752 34.0 20.0 35.0 8.0 39.0 51 27.704252029916017 33.0 20.0 35.0 8.0 38.0 52 26.727503795211767 33.0 15.0 35.0 8.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 0.0 15 5.0 16 29.0 17 76.0 18 227.0 19 462.0 20 958.0 21 1682.0 22 2866.0 23 4282.0 24 5995.0 25 8661.0 26 11674.0 27 15219.0 28 19907.0 29 25128.0 30 28613.0 31 29783.0 32 30802.0 33 36825.0 34 48180.0 35 64797.0 36 89161.0 37 86907.0 38 59268.0 39 2900.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.941045389339976 22.374166097965208 38.50120471859723 6.183583794097576 2 18.301103048704057 26.589288450021588 34.130966142532834 20.978642358741524 3 20.862870990654724 29.826708541663766 33.957570228826896 15.352850238854613 4 22.575939053773624 30.29484269021323 27.490390105987384 19.638828150025766 5 100.0 0.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 0.0 0.0 0.0 100.0 8 100.0 0.0 0.0 0.0 9 100.0 0.0 0.0 0.0 10 0.0 0.0 100.0 0.0 11 99.3743123354828 0.3713388392919319 0.110026322753165 0.1443225024721104 12 97.95197838470216 1.037590005710227 0.25469700979095 0.7557345997966601 13 93.82337989721591 3.3728638876895864 1.303951198451275 1.4998050166432222 14 41.39653347446414 32.718903636439606 13.99928273979471 11.885280149301542 15 26.41171432152756 41.57497806437237 23.214161362655116 8.799146251444965 16 31.605931672260834 32.35104664280441 23.39173549114915 12.651286193785602 17 21.548620492750796 34.91037729279537 22.294431832425733 21.246570382028104 18 19.354535452152476 38.803080737037085 23.310956671912646 18.531427138897786 19 17.916881380482167 38.27401428949457 29.346562025598526 14.46254230442473 20 21.244655366916895 34.784334480021165 28.35266918288046 15.618340970181475 21 25.131265581259317 34.89679809473405 18.751653876686955 21.220282447319676 22 29.591161682984918 37.0508419102798 17.540145680422278 15.817850726313004 23 23.270219077728722 36.680025347836384 23.50768095151878 16.542074622916115 24 25.579379117282492 36.02195651871144 17.626321360426736 20.772343003579337 25 27.788610186487656 34.1616063843122 20.57126641690227 17.47851701229788 26 26.63524881269063 37.73189092073926 16.2684015542959 19.364458712274203 27 24.668702385760643 41.789633849110736 15.791910976170248 17.74975278895837 28 24.789348337766885 43.1957772175875 15.425968997646272 16.588905446999345 29 24.904771521288005 45.43216668291528 15.124441163772092 14.538620632024625 30 27.24787955599504 49.941156808401 12.504526399353768 10.306437236250192 31 21.432152755532652 50.981706382919455 13.592254982521135 13.993885879026754 32 20.78452946337795 55.26507290984806 15.69633431289258 8.254063313881423 33 20.76886115792259 55.4711981727274 14.096078049052242 9.663862620297767 34 17.291367808247795 56.068160610576456 15.351631592874751 11.288839988300998 35 18.657992228520495 56.06833470285929 14.046461748443614 11.227211320176599 36 17.26873581147895 56.30074790044707 14.280789961142604 12.14972632693138 37 17.44195763290205 57.56291695101739 13.104622498293898 11.89050291778666 38 16.34865809668389 59.12852885057311 13.626899346805754 10.895913705937243 39 17.064873748276487 55.4067840280776 15.385405495745186 12.142936727900725 40 20.520083285748107 54.71650812662776 13.84085876241278 10.922549825211348 41 20.673458586927758 53.406115513711505 15.09362682970989 10.826799069650841 42 19.118640408907954 52.42127546970098 14.66657845991003 13.793505661481037 43 20.89664489352516 52.4237127616607 13.853219314494227 12.826423030319912 44 20.568306848094036 50.89257113410677 13.985355357167728 14.553766660631467 45 20.09529811562513 52.17615353546607 15.556712302057074 12.171836046851716 46 19.37177058815337 53.892877536524566 13.94984053146892 12.785511343853152 47 22.464345900474925 52.04349521594407 13.09330649990947 12.398852383671537 48 21.490995947131655 54.49262545089901 12.856366902967926 11.160011699001407 49 19.255825127783734 53.4602582136739 13.197761869611844 14.086154788930516 50 18.464923886853942 53.66342390774502 15.841875461344548 12.02977674405649 51 18.55423322794947 53.810705979025364 14.463935042687428 13.171125750337739 52 19.72587429144441 50.0985362320859 15.666042255678892 14.509547220790797 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 3.0 8 6.0 9 13.5 10 21.0 11 87.0 12 153.0 13 1641.5 14 4153.5 15 5177.0 16 5147.5 17 5118.0 18 5397.5 19 5677.0 20 5411.5 21 5146.0 22 5362.0 23 5578.0 24 8140.5 25 10703.0 26 13305.5 27 15908.0 28 20334.5 29 24761.0 30 29405.5 31 34050.0 32 34157.0 33 34264.0 34 32538.5 35 30813.0 36 28882.0 37 26951.0 38 25107.0 39 22535.5 40 21808.0 41 23671.5 42 25535.0 43 23589.0 44 21643.0 45 23795.0 46 25947.0 47 28585.0 48 31223.0 49 30789.0 50 30355.0 51 29836.0 52 29317.0 53 31509.5 54 33702.0 55 32856.0 56 32010.0 57 29955.0 58 27900.0 59 27566.5 60 27233.0 61 20261.0 62 13289.0 63 11494.0 64 9499.0 65 9299.0 66 5747.5 67 2196.0 68 1744.0 69 1292.0 70 949.0 71 606.0 72 436.0 73 266.0 74 220.5 75 175.0 76 117.5 77 60.0 78 48.5 79 37.0 80 45.0 81 53.0 82 33.5 83 14.0 84 9.0 85 4.0 86 3.0 87 2.0 88 2.0 89 12.0 90 22.0 91 11.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 574408.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.49461491451419 #Duplication Level Percentage of deduplicated Percentage of total 1 86.48497730188905 35.88660829032386 2 5.760350768092951 4.780470737890861 3 1.8087761254813255 2.251634063802438 4 0.8852636437536197 1.4693469598150448 5 0.6017430740006284 1.2484548566566045 6 0.4165294505225278 1.037023748999189 7 0.35833466468128145 1.0408271245029939 8 0.29665781173876266 0.9847761327585922 9 0.25317007809192704 0.9454675408471799 >10 2.8068293468380503 23.715777048631363 >50 0.19264332092858083 5.461986311162568 >100 0.10702406718141107 8.798599381765507 >500 0.017627493418114766 5.205980193165676 >1k 0.010072853381779866 7.173047609678114 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTTGGTCGGTGGGGATTCTGCATGGGGCAAATCTTGAACATTCTTAGAAAGC 3565 0.620638988314926 No Hit TATCGTCGGTGGGTGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTAT 3388 0.5898246542527263 No Hit ACGCGTCGGTGGGCCTGCCAAAGAGGCTGCCTGGGCAGTGGGGAAAAGCACA 3289 0.5725895182518349 No Hit GCAAGTCGGTGGGGTTGGACGCCTCGAACGTTGAGCAGGCTTTCCAAAACAT 2706 0.47109371735769695 No Hit CGACGTCGGTGCCCGTTACGGCCTTTCCGTCGGCCACCTTACAGTCCTTGCA 2589 0.45072492026573446 No Hit TAAGGTCGGTGGGGTTACAGTGAGCTATGATGGCAACACTGCACTCCAGCCT 2111 0.3675088090695116 No Hit CTTTGTCGGTGGGAGAGGCCAAGGTGGGCAGATCACCTGAGGTCAGGACTTC 2043 0.3556705338365761 No Hit TTGCGTCGGTGGGTGAGGCAAAGGTTGCAGTGAGCCGAGCCCGCACCACTGC 1882 0.327641676299773 No Hit GTGGGTCGGTGGGTTGAAATAACCGCCGGGCGTGGTGGCTGATGCCTGTAAT 1807 0.3145847550869765 No Hit GGATGTCGGTGGGAAAGAGGATGGTTCAGAAAATTTTGTCGGATAAGGTTAT 1479 0.25748248631634657 No Hit TTAAGTCGGTGGGGAGTTCAAGACCAGCATGGTCAACATGGCAAAACCCTGT 1377 0.23972507346694336 No Hit GTTCGTCGGTGGAGGGATTAAAGGCGTGAGCCATCGTGCCCTGCCTGAAACA 1328 0.2311945516079163 No Hit GTAGGTCGGTGGGGGTACAAAGTGCAAAGTGGCTGGTCTGGTGTTGTGCTTA 1284 0.22353449116307572 No Hit GAATGTCGGTGGGGTGTGTGCTTGAGCTTTCTTTAAACTGCTCCAAATAGTA 1251 0.2177894458294453 No Hit GTGAGTCGGTGGGAGCCCAATACAGCCAAATACTTATAGTCAACTGATCTTC 1206 0.20995529310176736 No Hit CTTAGTCGGTGGGCTGCGACACCGCATAAATCGCCGCAAGTTTTCAACCTGA 1168 0.20333978635395047 No Hit GCTCGTCGGTGGGGGGAAATTAGGAAACCATAGCTACCTGAGTACTGAAATC 1166 0.2029916017882759 No Hit TAAAGTCGGTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1121 0.19515744906059806 No Hit AAGGGTCGGTGGGGGAGCTGGGATTAACAGTCCCACCTTTTGGCTTGGTCCT 1112 0.19359061851506246 No Hit AGAGGTCGGTGGGGTCATTTTAAATAGCAATGAAAGAAAGACAGGGGAGAAA 1110 0.1932424339493879 No Hit GTTAGTCGGTGGGAGTCTTGCTCTGTCACCCAGCCTGGAGTGCAGTGGCGTG 1089 0.18958649600980487 No Hit TTGTGTCGGTGGGCAACTCAGGACAATTAGGTGATTGGCGTTTGGGTAGAAT 1085 0.18889012687845572 No Hit CACTGTCGGTGGGGGGAATTCACACCGGCGCACGCCACAGGCGTCATACTTC 1017 0.17705185164552026 No Hit CACGGTCGGTGGGGTAGCCTTGTATTATAGTTTGAAGTCAGGTAGCATGATG 1015 0.17670366707984567 No Hit ATTTGTCGGTGGGTTCCTTTCCATTCCATTCCATTCCATTCCGTTCCATTCC 992 0.1726995445745881 No Hit GATGGTCGGTGGGTTGCTCAAAGCTCCACTCAGACCACTGTTGAATGTTTCC 972 0.16921769891784239 No Hit GGTGGTCGGTGGATAACATCTTCAGTCATTGTAGTCTGACAGGCAAAATTAT 964 0.16782496065514407 No Hit TTGGGTCGGTGGGGATCCTCGGCGTGATTGCGATTATCCTCGGCGTGCTGTT 959 0.16695449924095765 No Hit AAAAGTCGGTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 925 0.1610353616244899 No Hit TGCCGTCGGTGGGGCTTTTCCATGCAAAGACTAGAAGTATTAAGGGTACTAT 916 0.15946853107895434 No Hit GGCCGTCGGTGGGATAGCTTGCAGGCTAACATCCTGGGTCCAACCCCACATT 911 0.15859806966476792 No Hit AAGCGTCGGTGGGAGAGTATTTGTCGGTGGGAGGGAACAGAGTTTGTGGCAA 910 0.1584239773819306 No Hit CGTAGTCGGTGGGGGAATTCAGATAAAACGAATAGCTCGTAACCAAACATGC 899 0.15650896227072045 No Hit GCTAGTCGGTGGGTACGCAGAGACACCAGGAAACAGAGGAACGACACCAGCC 877 0.15267893204830016 No Hit TCGTGTCGGTGGGATTTGAGGAAAACTGCGACTGTTCTTTAACCAAACATCC 877 0.15267893204830016 No Hit CAAGGTCGGTGGTAAGGTATACTGCAAATATTTCCTCCCGACTCAAGCATCC 876 0.1525048397654629 No Hit AGGGGTCGGTGGGTCATGCGGGAGATGTATTGTTAGCCATTTCCACCCGTGG 855 0.14884890182587987 No Hit TTGAGTCGGTGGGTTGGACTATTTCAATATTTATAATTTCCCACTACATACT 843 0.14675979443183243 No Hit ACACGTCGGTGGGCAGATGCTTTCATTTTAGATTTAGTTTTATTACAGATAG 831 0.144670687037785 No Hit TTTTGTCGGTGGGGGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAA 817 0.14223339507806299 No Hit TTTTGTCGGTGGGTCAATGTCATTGAGCCTTCTCATTATTTCAACTATTATT 752 0.13091739669363936 No Hit ATTAGTCGGTGGGTACTACTCTTTTAAATAACATTTGTTTTTTTTCTAATTT 732 0.12743555103689364 No Hit TCTAGTCGGTGGGGGGAATTCACACCGGCGCACGCCACAGGCGTCATACTTC 722 0.1256946282085208 No Hit TCATGTCGGTGGGACTTTGGGAGGCCGAGGTGGTTCAATCGCCTGAGGTCAG 680 0.11838275232935475 No Hit GCTTGTCGGTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 658 0.11455272210693444 No Hit GACTGTCGGTGGGGGGAATTCGAGCTCGCATTTTGAAAATTCTATGGAAGAG 652 0.11350816840991072 No Hit GTTCGTCGGTGGGGGTATTTCTCTTCAATGCGTGCCAGCGTACCGTCTTCAT 640 0.1114190610158633 No Hit TAAAGTCGGTGGGGGTTCTGACAGGCAGAGCAGAGGGAGCAGTTCCCCCTTT 629 0.10950404590465312 No Hit GGGGGTCGGTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 625 0.108807676773304 No Hit CTGAGTCGGTGGGCAGAGTAGGAGTCGGTGGGGGAATTCCTGGAGATTGTCT 617 0.1074149385106057 No Hit TCAGGTCGGTGGGACAACGGTTTTAGCACAGGTGTCATTAACTGCTGCGCGG 610 0.10619629253074471 No Hit GATCGTCGGTGGGGGGAATTCCTGGAGATTGTCTCGTACGGTTAAGAGCCTC 603 0.10497764655088368 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.02228381220317266 0.0 0.0 0.0 0.0 12 0.05675408420495536 0.0 0.0 0.0 0.0 13 0.09522847871199565 0.0 0.0 0.0 0.0 14 0.4059832035765519 0.0 0.0 0.0 0.0 15 0.7952535480007242 0.0 0.0 0.0 0.0 16 1.147790420746229 0.0 0.0 0.0 0.0 17 1.324494087826075 0.0 0.0 0.0 0.0 18 1.482047603793819 0.0 0.0 0.0 0.0 19 1.6286333059428142 0.0 0.0 0.0 0.0 20 1.7912354981128396 0.0 0.0 0.0 0.0 21 1.9867411317391124 0.0 0.0 0.0 0.0 22 2.201919193325998 0.0 0.0 0.0 0.0 23 2.3761855684461217 0.0 0.0 0.0 0.0 24 2.5741284940321165 0.0 0.0 0.0 0.0 25 2.8183799668528295 0.0 0.0 0.0 0.0 26 3.1134663862620298 0.0 0.0 0.0 0.0 27 3.3777384716090304 0.0 0.0 0.0 0.0 28 3.6390509881477975 0.0 0.0 0.0 0.0 29 4.0093452737427056 0.0 0.0 0.0 0.0 30 4.489491789807942 0.0 0.0 0.0 0.0 31 4.8794585033634625 0.0 0.0 0.0 0.0 32 5.138333727942507 0.0 0.0 0.0 0.0 33 5.3851965850057795 0.0 0.0 0.0 0.0 34 5.62126572053314 0.0 0.0 0.0 0.0 35 5.845496580827565 0.0 0.0 0.0 0.0 36 6.068682887424966 0.0 0.0 0.0 0.0 37 6.3005738081642315 0.0 0.0 0.0 0.0 38 6.533857467166196 0.0 0.0 0.0 0.0 39 6.787858107825796 0.0 0.0 0.0 0.0 40 7.048822439798888 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTTGTA 55 1.8189894E-12 46.000004 21 CGTTTGG 90 0.0 46.000004 39 CAGCCAC 55 1.8189894E-12 46.000004 38 CTCTGGT 35 1.0183794E-7 46.000004 41 ACAGCAA 35 1.0183794E-7 46.000004 36 CTTCAGA 35 1.0183794E-7 46.000004 24 CTTCAAT 90 0.0 46.000004 23 TTGTTAG 70 0.0 46.000004 30 AAGTAGC 45 3.092282E-10 46.000004 36 TCCTTCG 45 3.092282E-10 46.000004 20 CAATGAA 90 0.0 46.000004 28 GTTTGAA 110 0.0 46.000004 30 GTGTTGC 35 1.0183794E-7 46.000004 18 CCAATAC 110 0.0 46.000004 17 GCCTTGT 110 0.0 46.000004 17 AATCCAC 75 0.0 46.000004 46 TATACTG 70 0.0 46.000004 18 TAAACAG 35 1.0183794E-7 46.000004 33 GCCCAAT 110 0.0 46.000004 15 TTGTATT 110 0.0 46.000004 20 >>END_MODULE