##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528152_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3394910 Sequences flagged as poor quality 0 Sequence length 52 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.700453325714083 31.0 31.0 33.0 28.0 34.0 2 31.488805594257286 31.0 31.0 34.0 30.0 34.0 3 31.809266225025112 31.0 31.0 34.0 30.0 34.0 4 35.489236533516355 37.0 35.0 37.0 33.0 37.0 5 35.409896580468995 37.0 35.0 37.0 33.0 37.0 6 35.538782471405725 37.0 35.0 37.0 33.0 37.0 7 35.59601550556569 37.0 35.0 37.0 33.0 37.0 8 35.594711494560975 37.0 35.0 37.0 33.0 37.0 9 35.388574365741654 37.0 34.0 39.0 30.0 39.0 10 36.44551843789673 37.0 35.0 39.0 32.0 39.0 11 37.44170007452333 39.0 37.0 39.0 35.0 39.0 12 37.57532335172361 39.0 37.0 39.0 35.0 39.0 13 37.38131290667499 39.0 37.0 39.0 35.0 39.0 14 37.238784827874674 40.0 37.0 40.0 31.0 40.0 15 35.97063957512865 38.0 35.0 40.0 30.0 40.0 16 36.4767219160449 38.0 35.0 40.0 31.0 40.0 17 36.29359158269291 38.0 35.0 40.0 30.0 40.0 18 36.624489603553556 38.0 35.0 40.0 31.0 40.0 19 36.747603029240835 39.0 35.0 40.0 31.0 40.0 20 36.89677075386387 39.0 35.0 40.0 31.0 40.0 21 36.86457549684675 39.0 35.0 40.0 31.0 40.0 22 37.032371697629685 39.0 36.0 40.0 31.0 40.0 23 37.05512311077466 39.0 36.0 40.0 31.0 40.0 24 36.86406296485032 39.0 35.0 40.0 31.0 40.0 25 36.95597762532733 39.0 36.0 40.0 31.0 40.0 26 36.47184225796855 39.0 35.0 40.0 30.0 40.0 27 35.88972991920257 38.0 35.0 40.0 30.0 40.0 28 35.37639201039203 37.0 34.0 40.0 29.0 40.0 29 35.30033756417696 37.0 34.0 40.0 29.0 40.0 30 35.20451558362372 37.0 34.0 40.0 28.0 40.0 31 35.03632732531938 37.0 33.0 40.0 28.0 40.0 32 34.79200833011774 37.0 33.0 40.0 26.0 40.0 33 34.6718478545823 37.0 33.0 40.0 25.0 40.0 34 34.45529248198038 36.0 33.0 40.0 24.0 40.0 35 34.28803267244198 36.0 33.0 40.0 23.0 40.0 36 33.92038581287869 35.0 33.0 40.0 22.0 40.0 37 33.47882830472678 35.0 33.0 40.0 21.0 40.0 38 32.858911134610345 35.0 33.0 39.0 18.0 40.0 39 32.17452450874986 35.0 32.0 39.0 15.0 40.0 40 31.484699447113474 35.0 31.0 38.0 12.0 40.0 41 30.738108815844896 35.0 29.0 38.0 10.0 40.0 42 30.033948175356638 35.0 26.0 37.0 9.0 40.0 43 29.428405465829726 35.0 23.0 37.0 8.0 40.0 44 28.938314123202087 35.0 22.0 36.0 8.0 40.0 45 28.580209490089576 34.0 22.0 35.0 8.0 40.0 46 28.216806631103623 34.0 20.0 35.0 8.0 39.0 47 27.69950720343102 33.0 20.0 35.0 8.0 39.0 48 27.26627480551767 33.0 18.0 35.0 8.0 39.0 49 26.939133879837758 33.0 15.0 35.0 8.0 39.0 50 26.52613648079036 33.0 15.0 35.0 8.0 38.0 51 26.074093274932178 33.0 12.0 35.0 8.0 37.0 52 25.15825898182868 32.0 10.0 35.0 8.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 4.0 13 6.0 14 14.0 15 73.0 16 252.0 17 675.0 18 1930.0 19 4445.0 20 8753.0 21 15676.0 22 24647.0 23 36545.0 24 51602.0 25 70322.0 26 91851.0 27 117385.0 28 147031.0 29 175864.0 30 189539.0 31 176860.0 32 167742.0 33 190476.0 34 249363.0 35 317581.0 36 411762.0 37 537841.0 38 360312.0 39 46358.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.507274125087264 23.554144292484928 34.65977006754229 6.27881151488552 2 20.0941998462404 23.193309984653496 33.11215908521876 23.600331083887347 3 20.80714952679158 21.25947374157194 35.37006872052573 22.56330801111075 4 24.855828284107677 19.102803903490813 38.643115723244506 17.398252089157 5 100.0 0.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 0.0 0.0 100.0 0.0 8 100.0 0.0 0.0 0.0 9 0.0 0.0 100.0 0.0 10 100.0 0.0 0.0 0.0 11 99.2172693826935 0.4664924843368455 0.22162590466315749 0.09461222830649414 12 98.36390360863764 0.8466792934127856 0.30133346686657375 0.4880836310830037 13 91.5807488269203 5.333131069748536 1.5651372201324927 1.5209828831986711 14 36.40429348642527 43.02635415960953 10.235529071462866 10.333823282502335 15 21.753301265718385 51.249105278195884 18.28675870641637 8.710834749669358 16 32.1890712861313 39.791305218695044 17.36723506661443 10.652388428559226 17 19.05429009900115 38.93522950534771 23.112924937627213 18.897555458023923 18 19.988777316629896 41.15499379954108 23.032451523015336 15.82377736081369 19 22.779396213743517 39.92126448123809 24.763631436474014 12.53570786854438 20 24.09639725353544 40.24963842929562 21.86449714425419 13.789467172914746 21 24.559031019968128 37.899001740841435 18.107284140080296 19.43468309911014 22 28.747036003899957 38.27709718372505 19.504228388970546 13.47163842340445 23 24.704307330680344 39.18239364224678 16.7241252345423 19.38917379253058 24 22.594118842620276 40.7420520720726 21.94346830991101 14.720360775396108 25 29.921411760547407 37.86536314659299 18.101510791154993 14.11171430170461 26 25.811641545725806 39.98159008633513 20.368551743639742 13.838216624299319 27 33.217581614829264 41.758603320853865 14.443740776633254 10.58007428768362 28 31.70646644535496 41.81621898665944 14.663540417860856 11.813774150124745 29 31.038672601040968 44.35675761654948 11.85454106294423 12.750028719465318 30 29.516923865433842 48.85195778385878 11.802728201925824 9.828390148781558 31 21.933512228601053 54.19313030389613 12.095931850917992 11.777425616584829 32 19.988011464221437 59.142952243211155 11.697217304729728 9.171818987837675 33 19.896285910377596 59.94671434588841 10.429584289421516 9.727415454312485 34 16.06027847571806 61.24645425062815 11.1503397733666 11.542927500287195 35 18.346760297032912 59.79425080488142 11.76608510976727 10.092903788318393 36 17.35056304879953 60.277709865651815 12.85115069324371 9.520576392304951 37 17.834257756464826 59.726325587423524 13.026236336162079 9.413180319949571 38 17.993231042943698 58.9254796150708 13.687432067418575 9.393857274566924 39 18.768244224441887 58.64709226459611 12.685196367503115 9.899467143458885 40 21.20521604401884 57.836525857828335 11.503574468837172 9.454683629315653 41 22.953097431154287 55.94274958688153 10.934192659010106 10.169960322954068 42 20.528231970803347 55.61708557811548 11.895072328868807 11.95961012221237 43 21.741253818216094 53.900073934213275 13.120171079645704 11.238501167924923 44 22.8038151232286 53.16942128068196 12.631675066496609 11.395088529592831 45 21.448433095428154 53.14847816289681 13.353962255258608 12.04912648641643 46 23.171365367564974 53.292517327410735 11.601633032981729 11.934484272042557 47 22.78269527027226 53.17095298549888 11.602516708837642 12.443835035391219 48 22.128568945863073 53.243826787749896 11.49959792748556 13.128006338901473 49 21.920021443867437 54.31166069203602 11.72941256174685 12.038905302349693 50 20.252790206515048 54.83576884217843 11.808943388779083 13.102497562527432 51 19.552653825874618 54.36238368616546 12.072426073150687 14.01253641480923 52 22.147567976765217 51.0496301816543 13.471284953062085 13.331516888518399 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 2.0 8 4.0 9 27.5 10 51.0 11 591.5 12 1132.0 13 5847.0 14 23440.0 15 36318.0 16 43237.0 17 50156.0 18 45200.0 19 40244.0 20 34772.5 21 29301.0 22 33330.0 23 37359.0 24 44388.5 25 51418.0 26 64182.0 27 76946.0 28 94293.5 29 111641.0 30 133768.5 31 155896.0 32 174439.0 33 192982.0 34 207868.5 35 222755.0 36 226050.5 37 229346.0 38 221586.5 39 196756.0 40 179685.0 41 168275.0 42 156865.0 43 147602.0 44 138339.0 45 139446.0 46 140553.0 47 137077.5 48 133602.0 49 142358.5 50 151115.0 51 151346.0 52 151577.0 53 155418.0 54 159259.0 55 150261.0 56 141263.0 57 135888.0 58 130513.0 59 129296.0 60 128079.0 61 118253.0 62 108427.0 63 96610.0 64 67221.0 65 49649.0 66 39360.5 67 29072.0 68 24652.0 69 20232.0 70 15742.0 71 11252.0 72 10091.5 73 8931.0 74 8126.5 75 7322.0 76 4984.5 77 2647.0 78 1746.5 79 846.0 80 453.0 81 60.0 82 350.5 83 641.0 84 401.5 85 162.0 86 100.0 87 38.0 88 28.0 89 22.5 90 27.0 91 15.5 92 4.0 93 2.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 3394910.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.17124865597776 #Duplication Level Percentage of deduplicated Percentage of total 1 86.93661201110973 35.79288870417662 2 5.787776489127577 4.765799699981868 3 1.7121615445994645 2.1147548607572255 4 0.8379666800430788 1.3800053819791103 5 0.5160868762369444 1.0623970554819029 6 0.37469148643451783 0.9255909814364073 7 0.2853113017088022 0.8222635782909653 8 0.23132052665785657 0.7619003937809876 9 0.19922893691797916 0.7382253691184606 >10 2.789706685034006 24.61829788967961 >50 0.21234115043675064 5.824204873840143 >100 0.0820581210597197 7.266773914834723 >500 0.02274173920722365 6.687586900720656 >1k 0.011996451426427631 7.239310395921299 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTGTGCTGTGGGGGCTTTCTGCGCTCTCGCTGGACAAGTGAGCAGACCTGCG 3847 0.1133167005900009 No Hit GGAAGCTGTGGAGGGGCTGGTGAGATGGCTCAGTGAGTAAGAGCACCCGACT 3546 0.10445048616900005 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.027040481190959406 0.0 0.0 0.0 0.0 12 0.05820478304284944 0.0 0.0 0.0 0.0 13 0.1887826186850314 0.0 0.0 0.0 0.0 14 0.5988671275527186 0.0 0.0 0.0 0.0 15 0.9183454053273872 0.0 0.0 0.0 0.0 16 1.1340801376177867 0.0 0.0 0.0 0.0 17 1.2724932325157368 0.0 0.0 0.0 0.0 18 1.4472254050917404 0.0 0.0 0.0 0.0 19 1.6065816177748453 0.0 0.0 0.0 0.0 20 1.7540671181268428 0.0 0.0 0.0 0.0 21 1.910742847380343 0.0 0.0 0.0 0.0 22 2.0923087799087456 0.0 0.0 0.0 0.0 23 2.2948178302223035 0.0 0.0 0.0 0.0 24 2.5191536741769296 0.0 0.0 0.0 0.0 25 2.768055706925957 0.0 0.0 0.0 0.0 26 3.033364654733115 0.0 0.0 0.0 0.0 27 3.279350557157627 0.0 0.0 0.0 0.0 28 3.536588598814107 0.0 0.0 0.0 0.0 29 3.8226344733733737 0.0 0.0 0.0 0.0 30 4.129299451237293 0.0 0.0 0.0 0.0 31 4.433696327737701 0.0 0.0 0.0 0.0 32 4.69729683555676 0.0 0.0 0.0 0.0 33 4.94466716348887 0.0 0.0 0.0 0.0 34 5.186352510081269 0.0 0.0 0.0 0.0 35 5.413162646432453 0.0 0.0 0.0 0.0 36 5.6480731447961805 0.0 0.0 0.0 0.0 37 5.8899352265597615 0.0 0.0 0.0 0.0 38 6.136775348978324 0.0 0.0 0.0 0.0 39 6.403940016082901 0.0 0.0 0.0 0.0 40 6.679470147956794 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGCC 40 5.6170393E-9 46.000004 24 ACAACTA 20 6.3132046E-4 46.000004 19 GTCATTC 55 1.8189894E-12 46.000004 17 TTTAGTG 80 0.0 46.000004 43 CTTAACC 35 1.0203621E-7 46.000004 33 ATCCTAC 20 6.3132046E-4 46.000004 22 CATATTA 55 1.8189894E-12 46.000004 32 ATGATTT 20 6.3132046E-4 46.000004 37 TTAATTG 70 0.0 46.000004 20 TCACCGA 20 6.3132046E-4 46.000004 39 CTCAATA 110 0.0 46.000004 16 TTAATCT 35 1.0203621E-7 46.000004 29 CGTATAT 220 0.0 46.000004 40 ATAGGTA 40 5.6170393E-9 46.000004 33 TACCATA 35 1.0203621E-7 46.000004 34 GATAAAC 70 0.0 46.000004 22 ATCTAAC 20 6.3132046E-4 46.000004 34 CATGCAC 20 6.3132046E-4 46.000004 34 GACACGT 55 1.8189894E-12 46.000004 20 ACACCTA 70 0.0 46.000004 20 >>END_MODULE