##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528151_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3379202 Sequences flagged as poor quality 0 Sequence length 52 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.72467937696533 31.0 31.0 33.0 28.0 34.0 2 31.50943921079592 31.0 31.0 34.0 30.0 34.0 3 31.825920439204285 31.0 31.0 34.0 30.0 34.0 4 35.52313859899468 37.0 35.0 37.0 33.0 37.0 5 35.615744190492315 37.0 35.0 37.0 33.0 37.0 6 35.6073442783237 37.0 35.0 37.0 33.0 37.0 7 35.5936709317762 37.0 35.0 37.0 33.0 37.0 8 35.59687819787038 37.0 35.0 37.0 33.0 37.0 9 35.37157411720282 37.0 34.0 39.0 30.0 39.0 10 36.38982724323672 37.0 35.0 39.0 32.0 39.0 11 37.415904997688806 39.0 37.0 39.0 35.0 39.0 12 37.58912725548813 39.0 37.0 39.0 35.0 39.0 13 37.37899657966585 39.0 37.0 39.0 35.0 39.0 14 37.20877650995708 40.0 37.0 40.0 31.0 40.0 15 36.012009048290096 38.0 35.0 40.0 30.0 40.0 16 36.47787110684712 38.0 35.0 40.0 31.0 40.0 17 36.314372742440376 38.0 35.0 40.0 30.0 40.0 18 36.561046661312346 38.0 35.0 40.0 30.0 40.0 19 36.751635741219374 39.0 35.0 40.0 31.0 40.0 20 36.91176023214948 39.0 35.0 40.0 31.0 40.0 21 36.925251583066064 39.0 36.0 40.0 31.0 40.0 22 36.97417851907048 39.0 36.0 40.0 31.0 40.0 23 37.07503369138631 39.0 36.0 40.0 31.0 40.0 24 37.00685753618754 39.0 36.0 40.0 31.0 40.0 25 37.01437114442996 39.0 36.0 40.0 31.0 40.0 26 36.405638372609864 39.0 35.0 40.0 30.0 40.0 27 35.79939908889732 38.0 35.0 40.0 29.0 40.0 28 35.335409957735585 37.0 34.0 40.0 29.0 40.0 29 35.25489864175033 37.0 34.0 40.0 29.0 40.0 30 35.025488858020324 37.0 33.0 40.0 28.0 40.0 31 34.923297275510606 37.0 33.0 40.0 27.0 40.0 32 34.76970006528168 37.0 33.0 40.0 26.0 40.0 33 34.74175323049643 37.0 33.0 40.0 25.0 40.0 34 34.578547538738434 37.0 33.0 40.0 25.0 40.0 35 34.23322547749439 36.0 33.0 40.0 23.0 40.0 36 33.901252721796446 35.0 33.0 40.0 22.0 40.0 37 33.46022285734916 35.0 33.0 40.0 21.0 40.0 38 32.89368288726155 35.0 33.0 39.0 18.0 40.0 39 32.20983149276071 35.0 32.0 39.0 15.0 40.0 40 31.452779088080558 35.0 31.0 38.0 12.0 40.0 41 30.68595337005601 35.0 29.0 38.0 10.0 40.0 42 29.986132524779517 35.0 26.0 37.0 9.0 40.0 43 29.421457196107248 35.0 23.0 37.0 8.0 40.0 44 28.850628343614854 34.0 22.0 36.0 8.0 40.0 45 28.489952065606023 34.0 21.0 35.0 8.0 40.0 46 28.11442168890762 34.0 20.0 35.0 8.0 39.0 47 27.71467257654322 33.0 20.0 35.0 8.0 39.0 48 27.28001403881745 33.0 18.0 35.0 8.0 39.0 49 26.78971544169304 33.0 15.0 35.0 8.0 39.0 50 26.376149753699245 33.0 13.0 35.0 8.0 38.0 51 25.943338989501072 33.0 11.0 35.0 8.0 37.0 52 24.886018059885146 31.0 10.0 35.0 8.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 0.0 12 3.0 13 10.0 14 20.0 15 71.0 16 208.0 17 704.0 18 1894.0 19 4402.0 20 9096.0 21 15364.0 22 24747.0 23 36343.0 24 51672.0 25 70427.0 26 92470.0 27 117714.0 28 146729.0 29 175719.0 30 189598.0 31 175401.0 32 168172.0 33 191290.0 34 248722.0 35 314271.0 36 408652.0 37 535145.0 38 358911.0 39 41445.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.58491028355215 23.548251924566806 34.576832044962096 6.290005746918947 2 20.12697080553338 23.16990816174943 33.114386177564995 23.588734855152193 3 20.736966893367132 21.270317666715396 35.42519802012428 22.56751741979319 4 24.87463016416302 19.06967976463082 38.68700361801396 17.368686453192204 5 100.0 0.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 0.0 0.0 100.0 0.0 8 100.0 0.0 0.0 0.0 9 0.0 0.0 100.0 0.0 10 100.0 0.0 0.0 0.0 11 99.21806982832041 0.4657608512305568 0.22123566451487658 0.0949336559341525 12 98.3806235910135 0.8313205307051784 0.29731871607557053 0.49073716220575153 13 91.5854689953427 5.334395517048108 1.563416451576437 1.5167190360327674 14 36.30357107979931 43.15705305572144 10.22700033913332 10.312375525345924 15 21.743595085466925 51.348720792660515 18.180386967100517 8.727297154772044 16 32.2037273888924 39.83839971685622 17.34308869372118 10.614784200530185 17 19.008541069755523 38.98769591163831 23.109893992723727 18.89386902588244 18 19.96098487157619 41.24846635389065 22.981254154087267 15.809294620445893 19 22.785290728402742 39.9926077221782 24.71367500374349 12.508426545675578 20 24.047215881145902 40.336535075440885 21.83145606566284 13.784792977750367 21 24.585567835246312 37.93895718574977 18.03715788520485 19.438317093799068 22 28.6954138876575 38.317034613497505 19.552456467532867 13.435095031312127 23 24.583348376332637 39.278326658187346 16.801955017782305 19.33636994769771 24 22.622471222495726 40.82608852622601 21.84486159750142 14.70657865377684 25 29.88288359204333 37.87337957304713 18.11395116361792 14.129785671291625 26 25.71962256177642 40.05182288599497 20.340068454031453 13.888486098197147 27 33.16993183597784 41.76119095573452 14.450689837423155 10.618187370864481 28 31.654574068078794 41.880597845290104 14.660206758873839 11.804621327757262 29 30.972164434088285 44.40696353754525 11.90935019569709 12.71152183266937 30 29.48841176111993 48.81978052806551 11.891505746031164 9.800301964783403 31 21.910380024633035 54.21214831193873 12.087173243860533 11.790298419567696 32 19.975219001409208 59.188382345891135 11.6598830138003 9.176515638899362 33 19.840867755168233 60.05672345127636 10.34744297618195 9.754965817373451 34 16.0644732099472 61.38076386081684 11.025502470701664 11.529260458534294 35 18.25138005955252 59.7845881956746 11.912960515529997 10.051071229242881 36 17.356760560629404 60.31959616501174 12.84705679033097 9.476586484027887 37 17.794082744979438 59.8074930116637 13.013042724288159 9.385381519068703 38 18.000196496095825 58.98528705889734 13.656153139113908 9.35836330589293 39 18.814797102984667 58.65665917574623 12.633396878908098 9.895146842361006 40 21.219477261199536 57.83764924381555 11.525590953130354 9.417282541854556 41 23.017978800912168 55.88570911120436 10.924265551452681 10.17204653643079 42 20.57302286161052 55.59007718390318 11.851111593802324 11.985788360683971 43 21.81417387892171 53.8111660682019 13.143931614623808 11.230728438252582 44 22.798903409739932 53.126536975297725 12.744429010162756 11.330130604799594 45 21.44515184354176 53.124495073097144 13.403105230169727 12.027247853191374 46 23.20157244225116 53.327531174519905 11.53266362886859 11.93823275436035 47 22.883035698960878 53.218363388752735 11.500644234940676 12.397956677345716 48 22.153810278284634 53.332502762486534 11.354396688922415 13.15929027030642 49 21.856491562209065 54.2270334830531 11.914854453802999 12.001620500934836 50 20.26697427380784 54.8390122875164 11.825129128119597 13.068884310556161 51 19.533635455944925 54.38011696252547 12.103686018178255 13.982561563351348 52 22.347998136838225 50.85603050661073 13.53414208443295 13.261829272118092 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 1.0 8 2.0 9 19.0 10 36.0 11 530.0 12 1024.0 13 5685.0 14 23309.5 15 36273.0 16 42968.5 17 49664.0 18 44864.5 19 40065.0 20 34515.5 21 28966.0 22 32948.5 23 36931.0 24 44021.5 25 51112.0 26 63683.5 27 76255.0 28 93611.0 29 110967.0 30 133646.5 31 156326.0 32 174672.5 33 193019.0 34 207572.5 35 222126.0 36 225276.5 37 228427.0 38 221413.0 39 197203.0 40 180007.0 41 167868.5 42 155730.0 43 146493.5 44 137257.0 45 138534.5 46 139812.0 47 136117.5 48 132423.0 49 141587.0 50 150751.0 51 150693.5 52 150636.0 53 154116.5 54 157597.0 55 148894.0 56 140191.0 57 135410.5 58 130630.0 59 128845.0 60 127060.0 61 117304.5 62 107549.0 63 95734.5 64 66501.0 65 49082.0 66 39029.5 67 28977.0 68 24455.0 69 19933.0 70 15667.0 71 11401.0 72 10124.0 73 8847.0 74 7965.0 75 7083.0 76 4860.0 77 2637.0 78 1719.5 79 802.0 80 433.0 81 64.0 82 337.0 83 610.0 84 389.0 85 168.0 86 112.5 87 57.0 88 40.5 89 19.5 90 15.0 91 8.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 3379202.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.4240346526618 #Duplication Level Percentage of deduplicated Percentage of total 1 86.94372573222104 36.015599075630476 2 5.811569331209815 4.814772987247639 3 1.6953869398920716 2.106893020432783 4 0.8301606674804859 1.3755441702795401 5 0.5032310174672742 1.042292955292931 6 0.3628830065665089 0.90192469433239 7 0.3014730582009074 0.8741761286830824 8 0.24230416746978822 0.8029772983802301 9 0.21722584655473764 0.8098533895623523 >10 2.76584200857793 24.506276970753 >50 0.21017971836810476 5.775173636867728 >100 0.08165946598204503 7.233891698236306 >500 0.022589241197752484 6.626717406847214 >1k 0.011769798811732627 7.113906567454322 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTGTGCTGTGGGGGCTTTCTGCGCTCTCGCTGGACAAGTGAGCAGACCTGCG 3820 0.11304444066972023 No Hit GGAAGCTGTGGAGGGGCTGGTGAGATGGCTCAGTGAGTAAGAGCACCCGACT 3435 0.10165121824620132 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.02766925445711739 0.0 0.0 0.0 0.0 12 0.06075398866359572 0.0 0.0 0.0 0.0 13 0.19537156997421284 0.0 0.0 0.0 0.0 14 0.5987804221233297 0.0 0.0 0.0 0.0 15 0.9202764439651728 0.0 0.0 0.0 0.0 16 1.1343802471707818 0.0 0.0 0.0 0.0 17 1.2706550244702743 0.0 0.0 0.0 0.0 18 1.4427962578147149 0.0 0.0 0.0 0.0 19 1.6004074334709792 0.0 0.0 0.0 0.0 20 1.744820226787271 0.0 0.0 0.0 0.0 21 1.8991466032513002 0.0 0.0 0.0 0.0 22 2.07732476484093 0.0 0.0 0.0 0.0 23 2.272933077099268 0.0 0.0 0.0 0.0 24 2.492333988912175 0.0 0.0 0.0 0.0 25 2.736740804485793 0.0 0.0 0.0 0.0 26 2.9927183991960233 0.0 0.0 0.0 0.0 27 3.243961148223752 0.0 0.0 0.0 0.0 28 3.5001162996470763 0.0 0.0 0.0 0.0 29 3.7834968137447835 0.0 0.0 0.0 0.0 30 4.090226035614325 0.0 0.0 0.0 0.0 31 4.387781493974021 0.0 0.0 0.0 0.0 32 4.650920542779035 0.0 0.0 0.0 0.0 33 4.893522198436199 0.0 0.0 0.0 0.0 34 5.133016611614221 0.0 0.0 0.0 0.0 35 5.360141240446709 0.0 0.0 0.0 0.0 36 5.593421168666448 0.0 0.0 0.0 0.0 37 5.830962458000439 0.0 0.0 0.0 0.0 38 6.074540675579619 0.0 0.0 0.0 0.0 39 6.331287682713256 0.0 0.0 0.0 0.0 40 6.606175067367976 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCCTTA 140 0.0 46.000004 24 ATGATTA 35 1.0203621E-7 46.000004 30 GCGACGA 35 1.0203621E-7 46.000004 17 ATAGGTA 35 1.0203621E-7 46.000004 33 TACTTAT 70 0.0 46.000004 23 TCCTGTA 70 0.0 46.000004 18 TCATTCA 70 0.0 46.000004 18 TTTGTCC 70 0.0 46.000004 15 TAGGTAA 35 1.0203621E-7 46.000004 34 CACATAA 70 0.0 46.000004 46 CGGTTAT 35 1.0203621E-7 46.000004 24 CCTACAT 70 0.0 46.000004 24 CGATTAA 70 0.0 46.000004 35 CATTCGT 145 0.0 46.000004 35 CCCACTA 35 1.0203621E-7 46.000004 15 ACCTCCG 145 0.0 46.000004 46 CGTTAAT 35 1.0203621E-7 46.000004 24 ACGATTA 70 0.0 46.000004 34 GTAGCCA 35 1.0203621E-7 46.000004 44 CCATCTA 70 0.0 46.000004 16 >>END_MODULE