Basic Statistics
Measure | Value |
---|---|
Filename | SRR1528150_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3068150 |
Sequences flagged as poor quality | 0 |
Sequence length | 59 |
%GC | 42 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TACCCTA | 50 | 3.6379788E-12 | 53.000004 | 47 |
CGTATAA | 25 | 1.47931605E-5 | 53.000004 | 50 |
CCAGGTA | 25 | 1.47931605E-5 | 53.000004 | 47 |
CTATAAT | 25 | 1.47931605E-5 | 53.000004 | 20 |
ACTTACG | 50 | 3.6379788E-12 | 53.000004 | 20 |
GCATTTA | 50 | 3.6379788E-12 | 53.000004 | 48 |
CCACTGA | 100 | 0.0 | 53.000004 | 52 |
ACGTGCC | 100 | 0.0 | 53.000004 | 52 |
GTACTTC | 65 | 0.0 | 53.000004 | 18 |
ATAAGGT | 50 | 3.6379788E-12 | 53.000004 | 35 |
CATACTT | 310 | 0.0 | 53.000004 | 45 |
ACGTCCC | 25 | 1.47931605E-5 | 53.000004 | 37 |
ACCACCG | 155 | 0.0 | 53.000004 | 25 |
CTATTGA | 100 | 0.0 | 53.000004 | 34 |
CGTCACA | 65 | 0.0 | 53.000004 | 44 |
CTTAATA | 45 | 7.6397555E-11 | 53.0 | 29 |
ATTTACA | 15 | 0.0066973264 | 53.0 | 51 |
TTTAGAC | 85 | 0.0 | 53.0 | 30 |
TGATATA | 60 | 0.0 | 53.0 | 40 |
GATACGT | 30 | 7.0143506E-7 | 53.0 | 20 |