##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528148_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1507395 Sequences flagged as poor quality 0 Sequence length 52 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.476512791935757 31.0 31.0 33.0 28.0 33.0 2 31.26175023799336 31.0 31.0 33.0 30.0 34.0 3 31.748692280391005 31.0 31.0 34.0 30.0 34.0 4 35.532149834648514 37.0 35.0 37.0 33.0 37.0 5 35.75274961108402 37.0 35.0 37.0 35.0 37.0 6 35.52918445397523 37.0 35.0 37.0 33.0 37.0 7 35.39845694061609 37.0 35.0 37.0 32.0 37.0 8 31.44417488448615 33.0 31.0 35.0 25.0 35.0 9 35.91900464045589 37.0 35.0 39.0 32.0 39.0 10 37.31653216310257 39.0 37.0 39.0 34.0 39.0 11 37.33071358204054 39.0 37.0 39.0 35.0 39.0 12 37.4770720348681 39.0 37.0 39.0 35.0 39.0 13 37.38261106080357 39.0 37.0 39.0 35.0 39.0 14 37.51421027666935 40.0 37.0 40.0 32.0 40.0 15 36.81392070426133 39.0 36.0 40.0 31.0 40.0 16 36.67433817944202 38.0 35.0 40.0 31.0 40.0 17 36.611100607339154 39.0 36.0 40.0 31.0 40.0 18 36.62324606357325 39.0 35.0 40.0 31.0 40.0 19 36.87540293022068 39.0 36.0 40.0 31.0 40.0 20 37.074543168844265 39.0 36.0 40.0 32.0 40.0 21 37.17474782654845 39.0 36.0 40.0 32.0 40.0 22 36.96398820481692 39.0 36.0 40.0 31.0 40.0 23 37.01142500804368 39.0 36.0 40.0 31.0 40.0 24 37.093656937962514 39.0 36.0 40.0 32.0 40.0 25 36.94327764122874 39.0 35.0 40.0 31.0 40.0 26 36.533300826923266 39.0 35.0 40.0 30.0 40.0 27 36.16234497261833 38.0 35.0 40.0 30.0 40.0 28 35.99856441078815 38.0 35.0 40.0 30.0 40.0 29 36.01540936516308 38.0 35.0 40.0 30.0 40.0 30 35.79023348226576 38.0 35.0 40.0 30.0 40.0 31 35.746522975066256 38.0 35.0 40.0 30.0 40.0 32 35.7158409043416 38.0 35.0 40.0 30.0 40.0 33 35.64115775891521 38.0 35.0 40.0 30.0 40.0 34 35.48005997100959 38.0 35.0 40.0 29.0 40.0 35 35.16864590900195 37.0 34.0 40.0 27.0 40.0 36 34.95866312413136 37.0 34.0 40.0 27.0 40.0 37 34.7190776140295 36.0 34.0 40.0 26.0 40.0 38 34.287965662616635 35.0 33.0 40.0 24.0 40.0 39 33.87745813141214 35.0 33.0 39.0 23.0 40.0 40 33.39106073723211 35.0 33.0 39.0 21.0 40.0 41 32.90407358389805 35.0 33.0 39.0 19.0 40.0 42 32.41645089707741 35.0 32.0 39.0 16.0 40.0 43 31.9337313710076 35.0 31.0 39.0 14.0 40.0 44 31.375465621154376 35.0 31.0 38.0 10.0 40.0 45 31.10063918216526 35.0 30.0 38.0 10.0 40.0 46 30.746629118446062 35.0 29.0 38.0 9.0 40.0 47 30.356453351643065 35.0 27.0 37.0 9.0 40.0 48 29.94011324171833 35.0 25.0 37.0 9.0 40.0 49 29.420523485881272 35.0 24.0 37.0 8.0 40.0 50 29.023424517130547 34.0 23.0 36.0 8.0 40.0 51 28.564699365461607 34.0 22.0 36.0 8.0 39.0 52 27.535166296823327 33.0 20.0 35.0 8.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 2.0 13 7.0 14 6.0 15 23.0 16 77.0 17 246.0 18 587.0 19 1239.0 20 2503.0 21 4279.0 22 6717.0 23 10081.0 24 14692.0 25 20618.0 26 27769.0 27 36125.0 28 46413.0 29 58358.0 30 68349.0 31 72554.0 32 76409.0 33 88516.0 34 116020.0 35 151195.0 36 204747.0 37 248566.0 38 224337.0 39 26957.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.083883122870912 21.694114681287918 40.63593152425211 8.586070671589066 2 15.977364924256749 24.734591795780137 35.37194962169836 23.916093658264757 3 16.60427426122549 25.85831848984506 38.872889985703814 18.66451726322563 4 19.68966329329738 24.65936267534389 34.19627901114174 21.454695020216995 5 100.0 0.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 100.0 0.0 0.0 0.0 8 0.0 0.0 100.0 0.0 9 0.0 0.0 100.0 0.0 10 0.0 0.0 100.0 0.0 11 98.81318433456393 0.4136274831746158 0.5715821002457883 0.2016060820156628 12 98.68912925941774 0.6865486484962469 0.15264744808096087 0.47167464400505504 13 94.79811197463172 2.5896331087737456 1.304303118956876 1.3079517976376465 14 44.14324049104581 31.72426603511356 13.810779523615244 10.321713950225389 15 28.538438829901917 39.1453467737388 21.55208157118738 10.764132825171902 16 32.13703110332726 33.54840635666166 19.7171942324341 14.59736830757698 17 23.36998596917198 32.56167096215657 22.762049761343246 21.306293307328204 18 18.613767459756733 38.763495964893075 24.203941236371357 18.418795338978835 19 22.14807664878814 36.77443536697415 27.72989163424318 13.347596349994529 20 20.424772538054057 37.15024927109351 25.28925729486963 17.135720895982807 21 27.54891717167697 35.64759071112748 16.52805004660358 20.275442070591982 22 27.83331508993993 37.22932608904766 20.383243940705654 14.554114880306754 23 22.627446687829003 37.62895591401059 24.492783908663622 15.250813489496782 24 25.230812096364918 38.55187260140839 18.771921095665036 17.44539420656165 25 28.347579765091435 36.67485960879531 20.71660049290332 14.26096013320994 26 22.7227103712033 38.24458751687514 21.617890466666005 17.414811645255558 27 21.914826571668343 40.85989405563903 22.082864809820915 15.142414562871709 28 20.820156627824822 41.10030881089562 19.305755956467944 18.77377860481161 29 23.401099247377097 43.963526481114776 16.732973109238124 15.902401162270008 30 24.6296425289987 46.13502101307222 15.703913042036097 13.531423415892982 31 20.326589911735145 49.43727423800663 16.33725732140547 13.898878528852757 32 20.676133329352954 50.61135269786619 17.343363882724834 11.369150090056024 33 21.182967967918167 50.00288577313843 15.867307507322234 12.946838751621174 34 18.68621031647312 52.221614109108764 15.933978817761767 13.158196756656352 35 19.89571412934234 51.617790957247436 15.423031123229148 13.063463790181073 36 19.49489019135661 51.38248435214393 17.453752997721235 11.668872458778223 37 19.194504426510637 51.983123202611125 17.513657667698247 11.308714703179989 38 16.342431811170925 53.54031292395158 18.724156574753135 11.393098690124354 39 16.86910199383705 54.268655528245745 17.998998271853097 10.863244206064104 40 20.20193778007755 51.90789408217488 16.07952792731832 11.81064021042925 41 22.486541351138886 51.3297443603037 15.261427827477203 10.922286461080208 42 20.980764829391102 50.67994785706467 14.647919092208744 13.691368221335482 43 19.287512563064094 49.23016196816362 17.8592207085734 13.623104760198887 44 18.11044882064754 49.00673015367571 19.172612354426015 13.710208671250735 45 18.508619174138165 48.59124516135452 20.44646559130155 12.453670073205762 46 22.09208601594141 47.93302352734353 17.12205493583301 12.852835520882053 47 22.109865032058618 47.392488365690475 16.348402376284916 14.149244225965987 48 22.86945359378265 48.51402585254694 14.431519276632867 14.185001277037538 49 21.0603060246319 49.00931739855844 15.463365607554755 14.467010969254906 50 19.047230487032266 49.166807638342966 16.465956169418103 15.320005705206666 51 18.445795561216535 49.3367697252545 16.207099001920533 16.010335711608437 52 21.513936294070234 46.72166220532773 16.11926535513253 15.645136145469502 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 3.5 6 7.0 7 18.0 8 29.0 9 826.5 10 1624.0 11 4881.5 12 8139.0 13 12450.5 14 19136.0 15 21510.0 16 21273.0 17 21036.0 18 18509.5 19 15983.0 20 16529.5 21 17076.0 22 21967.0 23 26858.0 24 37546.5 25 48235.0 26 59567.5 27 70900.0 28 78926.0 29 86952.0 30 85080.0 31 83208.0 32 74632.0 33 66056.0 34 61633.5 35 57211.0 36 56877.5 37 56544.0 38 53490.0 39 49869.0 40 49302.0 41 54370.5 42 59439.0 43 55781.0 44 52123.0 45 58674.5 46 65226.0 47 71050.5 48 76875.0 49 82696.5 50 88518.0 51 92818.0 52 97118.0 53 97149.5 54 97181.0 55 89439.0 56 81697.0 57 64022.0 58 46347.0 59 48790.5 60 51234.0 61 43608.0 62 35982.0 63 29708.5 64 18821.0 65 14207.0 66 11996.5 67 9786.0 68 8335.5 69 6885.0 70 4825.5 71 2766.0 72 1554.5 73 343.0 74 258.5 75 174.0 76 120.5 77 67.0 78 58.5 79 50.0 80 41.0 81 32.0 82 28.0 83 24.0 84 13.5 85 3.0 86 6.5 87 10.0 88 7.5 89 2.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1507395.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.06917056742451 #Duplication Level Percentage of deduplicated Percentage of total 1 85.51341584243092 29.1337115013888 2 6.555887941632703 4.4670732900881225 3 2.0983045427919085 2.1446248611233765 4 1.0409618376164809 1.4185882559974214 5 0.6456745917785721 1.0998798899178182 6 0.43524743466248816 0.8897111454330158 7 0.3218681046994918 0.7676045551454445 8 0.2657638869314873 0.7243484155624449 9 0.2155997103128975 0.6610772974443675 >10 2.326813806335602 17.729139152881718 >50 0.3128393593789234 7.259981867166244 >100 0.20723015405427467 14.869368183569835 >500 0.04361701310363027 10.299360563233527 >1k 0.016775774270627025 8.535531021047897 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTTGGGGTTTGGTGTGCAGCGTTGCTCCCCGTTAACTCGCGTAAAGGCGCAG 3914 0.25965324284610203 No Hit ATAGGGGTTTGGGACAAGCCCCTAGACCTGCGACCCAAGAAGACTAGAGCCA 3675 0.24379807548784493 No Hit CCAGGGGTTTGGGGGGAGGCCGAGGTGGGCGGATCATGAAGTCAGGAGATCG 2859 0.18966495178768672 No Hit TCTTGGGTTTAGGAGGCCTCTGTACCTTCCAAGGGGCTCCCCCCTCTGCTCT 2564 0.17009476613628147 No Hit CATAGGGTTTGGGCGAGGTCAGGAGATCGAGGCCATCCCGGCTAAAACGGTG 2491 0.1652519744327134 No Hit GATAGGGTTTGGGAACATTACAGGGCTTGCCTCAAATCTCTGAAAAGCCACA 2472 0.16399152179753812 No Hit CTCAGGGTTTGGGCTGGACGCTTTGCGTGAAAATCTGCATTTGATCGGTACC 2415 0.16021016389201237 No Hit GATGGGGTTTCCCAGGACTGGGCTAGGGAGTGTTGGTCTAGATGCAAACCTA 2116 0.14037461979109656 No Hit GGCAGGGTTTGGGGCCGGTACTGGTGGCGCAGGCCGGTAGGATTTGCTGAAG 2107 0.13977756327969776 No Hit TATGGGGTTTGGGGTTGCTGGGTTTGGGAAAACCCTCACTAGTGACTGAAGA 1926 0.12777009343934403 No Hit TCAAGGGTTTGGGGCCGGCGTTGTGGCGCACGCCTTTAATCCCAGCATTGGG 1829 0.12133515103871248 No Hit GACTGGGTTTGGGGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTA 1776 0.1178191515826973 No Hit GGATGGGTTTGGGCAAGGTTCGCTGCAGCAGGTACCTTTACACCCTGGTTAT 1770 0.11742111390843142 No Hit CCAGGGGTTTGGGAAATAAAACGGGATAGCTGAATAAGTACCACGGTGAGCG 1761 0.11682405739703262 No Hit TTCCGGGTTTGGTGACGTCACCATTGCCGAAGTCCGCATGGAAACCCGCAGC 1735 0.11509922747521385 No Hit ATGTGGGTTTGGGGCTTTCTGCGCTCTCGCTGGACAAGTGAGCAGGGACGGC 1725 0.11443583135143742 No Hit TCTTGGGTTTGGGTACAAAGATGGCGGCTGCCGCTGCTAGCCGAGCGGTCGG 1720 0.1141041332895492 No Hit TCTCGGGTTTGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCCTCCC 1684 0.11171590724395397 No Hit ACCTGGGTTTGGGCAATTCTCCTCCCTCAGCCTCCCAAGTAGCTAGGATTGC 1679 0.11138420918206575 No Hit ACTAGGGTTTGGGGTTTCTCTCTTGCTCTGCGCGCCCGGCGCTCTGGCTCCT 1672 0.11091983189542225 No Hit TTTGGGGTTTGGGGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTA 1645 0.10912866236122583 No Hit GCCGGGGTTTGCCCAGGGGTGTTACCAAACGTGGCAAAACAGCCTGTGATAA 1623 0.10766919088891765 No Hit TACGGGGTTTGGGCTCTTCTGGGATCACAGGCCTGCACACTACAGCTGGTTT 1605 0.10647507786612004 No Hit TCTCGGGTTTGGGAGAGTTTGAGGGTTTGGGTGGCTGGCCGCTGTATGAATC 1594 0.10574534212996593 No Hit TTAAGGGTTTGGGAGATTGGGACCATCCTGGCTAACACGGTGAAACCCCATC 1562 0.10362247453388129 No Hit AAAGGGGTTTGGGCATGTGCGTCCCATGGTGTGGCCCCAAGCTTCGGGCATG 1559 0.10342345569674836 No Hit ATGTGGGTTTGGGGTGGGTGATTGCATGAGCCCCGGGGTTCGAGACCAGCTT 1554 0.10309175763486013 No Hit TCGAGGGTTTGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCCTCCC 1552 0.10295907841010486 No Hit TGTGGGGTTTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 1518 0.10070353158926491 No Hit CATGGGGTTTGGGGAGTATTATGGGTTTGGGGGCTGGTGAGATGGCTCAGTG 1508 0.10004013546548848 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.011609432166087853 0.0 0.0 0.0 0.0 12 0.033766862700221244 0.0 0.0 0.0 0.0 13 0.09393689112674515 0.0 0.0 0.0 0.0 14 0.5506187827344525 0.0 0.0 0.0 0.0 15 1.0068362970555162 0.0 0.0 0.0 0.0 16 1.2451281847160167 0.0 0.0 0.0 0.0 17 1.3857018233442462 0.0 0.0 0.0 0.0 18 1.540604818246047 0.0 0.0 0.0 0.0 19 1.6995545295028842 0.0 0.0 0.0 0.0 20 1.8725018989714044 0.0 0.0 0.0 0.0 21 2.0475057964236316 0.0 0.0 0.0 0.0 22 2.2241018445729224 0.0 0.0 0.0 0.0 23 2.3729015951359798 0.0 0.0 0.0 0.0 24 2.5447875308064574 0.0 0.0 0.0 0.0 25 2.735248557942676 0.0 0.0 0.0 0.0 26 2.9635895037465296 0.0 0.0 0.0 0.0 27 3.2209871997717916 0.0 0.0 0.0 0.0 28 3.4707558403736245 0.0 0.0 0.0 0.0 29 3.788124545988278 0.0 0.0 0.0 0.0 30 4.161218526000153 0.0 0.0 0.0 0.0 31 4.463196441543192 0.0 0.0 0.0 0.0 32 4.681785464327532 0.0 0.0 0.0 0.0 33 4.878150716965361 0.0 0.0 0.0 0.0 34 5.081614308127597 0.0 0.0 0.0 0.0 35 5.260266884260595 0.0 0.0 0.0 0.0 36 5.442966176748629 0.0 0.0 0.0 0.0 37 5.632830147373449 0.0 0.0 0.0 0.0 38 5.833242116366314 0.0 0.0 0.0 0.0 39 6.031929255437361 0.0 0.0 0.0 0.0 40 6.233734356290157 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTAATG 40 5.6134013E-9 46.000004 19 TATTTAG 35 1.0198528E-7 46.000004 33 CTGCTAC 40 5.6134013E-9 46.000004 43 GAAATCT 20 6.312082E-4 46.000004 13 GATACTC 70 0.0 46.000004 38 TGGAGAC 20 6.312082E-4 46.000004 20 CCTTAGT 20 6.312082E-4 46.000004 35 CTGTCCC 20 6.312082E-4 46.000004 32 TCCATCC 20 6.312082E-4 46.000004 29 ACAGTAC 80 0.0 46.000004 28 CAAACAT 215 0.0 46.000004 45 CTACTTG 35 1.0198528E-7 46.000004 43 CTACTTA 20 6.312082E-4 46.000004 18 ATGATCT 20 6.312082E-4 46.000004 29 CATATAC 35 1.0198528E-7 46.000004 32 CCCTCAA 70 0.0 46.000004 44 CTCCGTA 40 5.6134013E-9 46.000004 31 CTGTAGG 40 5.6134013E-9 46.000004 19 AATCAAG 35 1.0198528E-7 46.000004 41 TACTTCA 20 6.312082E-4 46.000004 17 >>END_MODULE