##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528143_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1881725 Sequences flagged as poor quality 0 Sequence length 52 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.751046513172753 31.0 31.0 34.0 27.0 34.0 2 31.55647132285536 31.0 31.0 34.0 28.0 34.0 3 31.855431053953154 31.0 31.0 34.0 30.0 34.0 4 35.62897182106843 37.0 35.0 37.0 33.0 37.0 5 35.24208106923169 37.0 35.0 37.0 33.0 37.0 6 35.69845646946286 37.0 35.0 37.0 33.0 37.0 7 35.540650732705366 37.0 35.0 37.0 33.0 37.0 8 35.572028325074065 37.0 35.0 37.0 33.0 37.0 9 37.50929067743693 39.0 37.0 39.0 35.0 39.0 10 37.27385032350636 39.0 37.0 39.0 33.0 39.0 11 37.76074771818411 39.0 37.0 39.0 35.0 39.0 12 37.59542759967583 39.0 37.0 39.0 35.0 39.0 13 37.453660338253464 39.0 37.0 39.0 35.0 39.0 14 37.54514129322829 40.0 37.0 40.0 32.0 40.0 15 36.73967662649962 39.0 36.0 40.0 31.0 40.0 16 36.682693804886476 38.0 35.0 40.0 31.0 40.0 17 36.49868020034808 39.0 36.0 40.0 31.0 40.0 18 36.69432196521809 39.0 36.0 40.0 31.0 40.0 19 36.85759502584065 39.0 36.0 40.0 31.0 40.0 20 36.944587014574395 39.0 36.0 40.0 31.0 40.0 21 37.020591212849915 39.0 36.0 40.0 31.0 40.0 22 37.04545563246489 39.0 36.0 40.0 31.0 40.0 23 36.97046327173206 39.0 36.0 40.0 31.0 40.0 24 36.99967689221326 39.0 36.0 40.0 31.0 40.0 25 37.09315654519125 39.0 36.0 40.0 31.0 40.0 26 36.83637300880841 39.0 36.0 40.0 31.0 40.0 27 36.4785757748874 39.0 35.0 40.0 30.0 40.0 28 36.110827033705775 38.0 35.0 40.0 30.0 40.0 29 35.993732878077296 38.0 35.0 40.0 30.0 40.0 30 35.83311323386786 38.0 35.0 40.0 30.0 40.0 31 35.75778235395714 38.0 35.0 40.0 30.0 40.0 32 35.66051149875779 38.0 35.0 40.0 30.0 40.0 33 35.50687002617279 38.0 35.0 40.0 29.0 40.0 34 35.28370192243819 38.0 35.0 40.0 27.0 40.0 35 35.11722222960316 38.0 34.0 40.0 26.0 40.0 36 34.86052531586709 37.0 34.0 40.0 25.0 40.0 37 34.63309410248575 37.0 33.0 40.0 24.0 40.0 38 34.25083952224688 37.0 33.0 40.0 22.0 40.0 39 33.68347394013472 36.0 33.0 40.0 21.0 40.0 40 33.12700899440673 35.0 33.0 40.0 18.0 40.0 41 32.52871328169632 35.0 33.0 39.0 15.0 40.0 42 31.983235594999268 35.0 31.0 39.0 12.0 40.0 43 31.389330534482987 35.0 30.0 39.0 10.0 40.0 44 30.87101090754494 35.0 29.0 39.0 9.0 40.0 45 30.487757244018123 35.0 26.0 38.0 9.0 40.0 46 30.02743705908143 35.0 25.0 38.0 8.0 40.0 47 29.47477341269314 35.0 23.0 38.0 8.0 40.0 48 29.00105754028883 35.0 23.0 37.0 8.0 40.0 49 28.696740490773095 34.0 21.0 37.0 8.0 40.0 50 28.26076552099802 34.0 20.0 36.0 8.0 40.0 51 27.82895587825001 33.0 19.0 35.0 8.0 39.0 52 27.028956409677292 33.0 15.0 35.0 8.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 5.0 14 14.0 15 31.0 16 115.0 17 354.0 18 922.0 19 2095.0 20 4057.0 21 6663.0 22 10286.0 23 14867.0 24 20472.0 25 28227.0 26 37756.0 27 49263.0 28 63321.0 29 78303.0 30 90699.0 31 93409.0 32 90493.0 33 96699.0 34 119837.0 35 160162.0 36 221902.0 37 313720.0 38 325119.0 39 52932.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.44615977361198 21.461371879525434 38.00980483333112 6.082663513531467 2 20.1392339475747 22.605534815129737 34.392432475521126 22.862798761774435 3 19.70394186185548 22.755131594680414 36.0164742457054 21.524452297758707 4 21.50494891655263 20.673796649350994 36.62357677131355 21.19767766278282 5 0.0 0.0 100.0 0.0 6 0.0 100.0 0.0 0.0 7 0.0 0.0 0.0 100.0 8 0.0 0.0 100.0 0.0 9 0.0 0.0 100.0 0.0 10 0.0 0.0 0.0 100.0 11 99.11655528836573 0.518513597895548 0.27591704420146407 0.0890140695372597 12 98.00698826874277 1.470671856939776 0.33389576053886727 0.18844411377858084 13 91.34028617359073 5.719114110722874 1.4262445362632692 1.5143551794231358 14 39.022226946020275 39.668336234040574 13.035432913948638 8.274003905990513 15 28.028325074067677 43.927088177071575 19.768297705562716 8.276289043298037 16 36.817654014268825 32.406435584370726 18.67260093796915 12.103309463391303 17 18.57896345108876 34.417781556816216 23.24882753856169 23.754427453533328 18 18.088084071795826 44.899068673690365 20.255244522977588 16.757602731536224 19 23.766703423720255 42.336473182850845 23.087911357929556 10.808912035499342 20 16.144707648567138 43.248933824017854 25.286319733223507 15.3200387941915 21 23.729078372238238 41.2304135832813 17.883962853233072 17.156545191247393 22 22.514023037372624 42.31898922531188 20.22739773346265 14.939590003852848 23 15.017869242317555 44.366259681940775 22.08330122626845 18.532569849473223 24 15.758413158139472 44.38570992041876 21.171053156013762 18.684823765428 25 18.47953340684744 39.56933133162391 23.993038302621265 17.958096958907387 26 17.006204413503568 42.196176380714505 18.734724787096944 22.062894418684984 27 20.0759409584291 44.792836360254555 17.864831471123573 17.266391210192776 28 20.875579587878143 46.28056703290863 17.21133534389988 15.632518035313343 29 22.12778168967304 45.87838286678447 14.555368079820378 17.438467363722115 30 23.88584942007998 47.5484462394877 16.72449481194117 11.841209528491145 31 18.743174480861974 51.56162563605202 16.488806812897742 13.206393070188257 32 17.945927274176622 53.98036376197373 16.369395102897606 11.704313860952052 33 18.570354329139484 53.526312293241574 16.57208146780215 11.33125190981679 34 16.34484316252375 57.70896384965922 14.942406568441191 11.003786419375839 35 16.917190343966308 53.04478603409106 17.12646640715301 12.911557214789621 36 15.290066295553281 54.11550571948611 19.575177031712922 11.019250953247685 37 14.392591903705377 55.294158285615595 18.088509213620483 12.22474059705855 38 15.302501693924459 54.58714743121338 16.659820111865443 13.450530762996719 39 17.071676254500527 54.7401453453613 17.151709202991935 11.036469197146236 40 18.348855438493935 53.83113898151962 15.660417967556365 12.159587612430084 41 18.797326920777476 54.736478497123656 15.69496074080963 10.771233841289241 42 18.876615871075742 55.80209648062283 13.199750229178015 12.121537419123412 43 18.159135899241388 53.809137892093695 14.88171757297161 13.150008635693315 44 18.091060064568413 52.86516361317408 17.66055082437657 11.383225497880932 45 18.311974385205065 53.750149463922725 15.666263667645378 12.271612483226827 46 20.16569902615951 53.775445402489744 12.17446757629303 13.884387995057725 47 21.81817215586762 54.76586642575296 12.632770463271731 10.78319095510768 48 21.539225976165486 55.22586988003029 12.823659142542082 10.41124500126214 49 20.219692037890766 55.58415815275877 12.906136656525263 11.2900131528252 50 18.07267268065206 57.516799744914906 12.684797194063957 11.725730380369075 51 17.555859650055137 57.10345560589353 13.028524359297986 12.312160384753351 52 19.75394916898059 54.27992932017165 13.449095909338507 12.517025601509255 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 2.0 4 4.0 5 87.5 6 171.0 7 270.5 8 370.0 9 3983.5 10 7597.0 11 12002.0 12 16407.0 13 19360.0 14 23643.5 15 24974.0 16 22075.0 17 19176.0 18 20926.0 19 22676.0 20 28067.0 21 33458.0 22 44501.5 23 55545.0 24 71392.5 25 87240.0 26 101722.5 27 116205.0 28 119828.0 29 123451.0 30 117608.5 31 111766.0 32 104607.0 33 97448.0 34 91106.0 35 84764.0 36 83804.5 37 82845.0 38 84833.5 39 85295.0 40 83768.0 41 88608.5 42 93449.0 43 99566.0 44 105683.0 45 115274.0 46 124865.0 47 124588.0 48 124311.0 49 118973.5 50 113636.0 51 104414.5 52 95193.0 53 80160.0 54 65127.0 55 51755.0 56 38383.0 57 28477.0 58 18571.0 59 13857.5 60 9144.0 61 7542.5 62 5941.0 63 4774.5 64 3970.0 65 4332.0 66 2447.0 67 562.0 68 933.0 69 1304.0 70 749.5 71 195.0 72 249.5 73 304.0 74 175.5 75 47.0 76 34.0 77 21.0 78 19.0 79 17.0 80 14.0 81 11.0 82 9.5 83 8.0 84 10.0 85 12.0 86 6.0 87 0.0 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1881725.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.940360691635455 #Duplication Level Percentage of deduplicated Percentage of total 1 85.55516574103646 34.17104178729649 2 5.930515225875473 4.737338344174045 3 1.8854595275690123 2.2591780080176074 4 0.9854890470335815 1.5744315198470935 5 0.6086930751685931 1.2155710486367186 6 0.4536843804073786 1.0872190676179108 7 0.3729238967821636 1.0426300463606888 8 0.3163678060155635 1.0108675426786369 9 0.2496724107659617 0.8974805526668409 >10 3.2201047624685155 27.887514892796624 >50 0.26920411216090884 7.221957750425034 >100 0.13427439979928615 10.180825605853595 >500 0.013156063580592878 3.545270034981972 >1k 0.005289551336527034 3.168673798646754 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTACTTCGGGCGGATTGCAAATCCGTCTAGTCCGGTTCGACTCCGGAAC 3113 0.16543331251909818 No Hit AACCTACTTCGGGTGGCTTATGCCTGTAATCTTAGCACATTTGGAGGCTGAG 2327 0.12366312824668854 No Hit CCGATACTTCGGGGCATATTGCATATTGAGTGCATATTGCGTATTGCATATT 2233 0.11866771180698561 No Hit CGGCTACTTCGGGCCGGATGAGTATTCAAAAGGAAACTCATCTGGCTATTTT 2221 0.11802999907000225 No Hit AGTGTACTTCGGGTTGTCACATCTCAATATCATGGCAATTATACAGATTCAG 1971 0.10474431704951574 No Hit GCGGTACTTCGGGCTGGCCAATATGGTGAAACCCCATCTCTACCAAAAGTAC 1931 0.10261860792623789 No Hit TGCATACTTCGGGATGAAAAAACAGTGCTTCGGCTGCTTGAGGAGCTTGAAG 1925 0.1022997515577462 No Hit CGAATACTTCGGGGAACTGCCTGCCACATTCGGCCCACGGGAGCTGCCTGCG 1911 0.10155575336459896 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.004835988255457094 0.0 0.0 0.0 0.0 12 0.030238212278627323 0.0 0.0 0.0 0.0 13 0.07689752753457599 0.0 0.0 0.0 0.0 14 0.36902310380103365 0.0 0.0 0.0 0.0 15 0.6109819447581342 0.0 0.0 0.0 0.0 16 0.7851306646826715 0.0 0.0 0.0 0.0 17 0.9702799293201716 0.0 0.0 0.0 0.0 18 1.1945422418259841 0.0 0.0 0.0 0.0 19 1.4040840186530976 0.0 0.0 0.0 0.0 20 1.6149543636822596 0.0 0.0 0.0 0.0 21 1.818597297692277 0.0 0.0 0.0 0.0 22 2.012674540647544 0.0 0.0 0.0 0.0 23 2.193147245213833 0.0 0.0 0.0 0.0 24 2.3908381936786727 0.0 0.0 0.0 0.0 25 2.589645139433233 0.0 0.0 0.0 0.0 26 2.823845142090369 0.0 0.0 0.0 0.0 27 3.0480011691400177 0.0 0.0 0.0 0.0 28 3.288312585526578 0.0 0.0 0.0 0.0 29 3.5875061446279344 0.0 0.0 0.0 0.0 30 3.950470977427626 0.0 0.0 0.0 0.0 31 4.277033041491185 0.0 0.0 0.0 0.0 32 4.530895853538642 0.0 0.0 0.0 0.0 33 4.737142781224674 0.0 0.0 0.0 0.0 34 4.945302847121657 0.0 0.0 0.0 0.0 35 5.1392738046207604 0.0 0.0 0.0 0.0 36 5.332394478470552 0.0 0.0 0.0 0.0 37 5.531413995137441 0.0 0.0 0.0 0.0 38 5.7322403645591145 0.0 0.0 0.0 0.0 39 5.951507260625224 0.0 0.0 0.0 0.0 40 6.168010734831072 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACAACTC 20 6.312484E-4 46.000004 24 TTAGGTG 80 0.0 46.000004 26 GAAATGC 55 1.8189894E-12 46.000004 29 AGCAATT 70 0.0 46.000004 43 AGACTAA 110 0.0 46.000004 35 TGCCCAT 35 1.0200347E-7 46.000004 21 CCCTCGA 40 5.6152203E-9 46.000004 22 ATGATCC 80 0.0 46.000004 18 GTCTGTG 40 5.6152203E-9 46.000004 24 CCCTAGT 40 5.6152203E-9 46.000004 26 TAGACCT 70 0.0 46.000004 22 TCCTGCA 35 1.0200347E-7 46.000004 28 TTTAAGG 40 5.6152203E-9 46.000004 22 GTTTACA 35 1.0200347E-7 46.000004 13 ATGTGTC 35 1.0200347E-7 46.000004 27 CATGACA 20 6.312484E-4 46.000004 26 GACGTGA 35 1.0200347E-7 46.000004 40 CTATAAT 70 0.0 46.000004 15 CTATAAC 40 5.6152203E-9 46.000004 31 TTATGAA 40 5.6152203E-9 46.000004 38 >>END_MODULE