##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528138_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1675372 Sequences flagged as poor quality 0 Sequence length 59 %GC 38 >>END_MODULE >>Per base sequence quality warn #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.694914323505465 31.0 31.0 33.0 27.0 34.0 2 31.3693985574547 31.0 31.0 34.0 28.0 34.0 3 31.529489570077573 31.0 31.0 34.0 30.0 34.0 4 35.275636097535354 37.0 35.0 37.0 33.0 37.0 5 34.99514197443911 37.0 35.0 37.0 32.0 37.0 6 35.19846159539493 37.0 35.0 37.0 32.0 37.0 7 35.33213817587974 37.0 35.0 37.0 33.0 37.0 8 35.26786886733215 37.0 35.0 37.0 32.0 37.0 9 37.24824397208501 39.0 37.0 39.0 34.0 39.0 10 36.72053012704044 39.0 35.0 39.0 32.0 39.0 11 37.13448535608808 39.0 37.0 39.0 34.0 39.0 12 37.223550351802466 39.0 37.0 39.0 35.0 39.0 13 36.876530107940205 39.0 37.0 39.0 32.0 39.0 14 36.513188712715746 39.0 36.0 40.0 30.0 40.0 15 35.201948582165635 38.0 33.0 40.0 27.0 40.0 16 35.47633540491306 38.0 34.0 40.0 27.0 40.0 17 35.42814312284078 38.0 34.0 40.0 27.0 40.0 18 35.81406994983801 38.0 34.0 40.0 29.0 40.0 19 36.176484983633486 38.0 35.0 40.0 30.0 40.0 20 36.21601709948597 38.0 35.0 40.0 30.0 40.0 21 36.22353901103755 38.0 35.0 40.0 30.0 40.0 22 36.263904374670226 38.0 35.0 40.0 30.0 40.0 23 36.289858610505604 38.0 35.0 40.0 30.0 40.0 24 36.33778945810244 39.0 35.0 40.0 30.0 40.0 25 36.36261916756398 39.0 35.0 40.0 30.0 40.0 26 35.9741239557543 39.0 35.0 40.0 29.0 40.0 27 35.4725971306671 38.0 34.0 40.0 27.0 40.0 28 34.87583175557428 37.0 33.0 40.0 26.0 40.0 29 34.48398982434946 36.0 33.0 40.0 25.0 40.0 30 34.161527111590736 35.0 33.0 40.0 25.0 40.0 31 33.94709771919311 35.0 33.0 40.0 24.0 40.0 32 33.79103029058621 35.0 33.0 39.0 23.0 40.0 33 33.4914228004288 35.0 33.0 39.0 21.0 40.0 34 33.32333714542203 35.0 32.0 39.0 21.0 40.0 35 33.22992266792092 35.0 32.0 39.0 21.0 40.0 36 32.87415153171952 35.0 31.0 39.0 19.0 40.0 37 32.72634674567797 35.0 31.0 39.0 18.0 40.0 38 32.42333165410428 35.0 31.0 39.0 16.0 40.0 39 31.680854162538232 35.0 30.0 39.0 14.0 40.0 40 31.051312186189097 35.0 28.0 38.0 10.0 40.0 41 30.21363374820637 35.0 25.0 38.0 9.0 40.0 42 29.588799383062387 34.0 24.0 38.0 9.0 40.0 43 29.008143862974908 34.0 22.0 37.0 8.0 40.0 44 28.505136769624894 33.0 21.0 37.0 8.0 40.0 45 28.17824518972503 33.0 20.0 37.0 8.0 40.0 46 27.763355839777674 33.0 19.0 36.0 8.0 40.0 47 27.267101873494365 33.0 17.0 36.0 8.0 40.0 48 26.89094601079641 33.0 15.0 35.0 8.0 39.0 49 26.515048001279716 33.0 14.0 35.0 8.0 39.0 50 25.87915101840069 32.0 12.0 35.0 8.0 39.0 51 25.533994838161316 31.0 10.0 35.0 8.0 38.0 52 24.94633788794369 31.0 10.0 35.0 8.0 38.0 53 24.73153066900963 31.0 10.0 35.0 8.0 38.0 54 24.321292226442843 29.0 10.0 35.0 8.0 38.0 55 23.900871567627966 28.0 10.0 35.0 8.0 38.0 56 23.245809288922104 27.0 9.0 35.0 8.0 37.0 57 22.579183608177765 25.0 9.0 35.0 8.0 37.0 58 21.94353970342109 23.0 8.0 34.0 8.0 37.0 59 21.141844915636646 20.0 8.0 34.0 8.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 5.0 13 5.0 14 39.0 15 151.0 16 627.0 17 1925.0 18 4377.0 19 8487.0 20 14294.0 21 21561.0 22 30663.0 23 41410.0 24 54006.0 25 67687.0 26 82823.0 27 94243.0 28 88580.0 29 74775.0 30 73490.0 31 83709.0 32 97538.0 33 113410.0 34 134233.0 35 144688.0 36 158492.0 37 151548.0 38 122489.0 39 10116.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.349190508137895 24.993553670468412 35.9320198737952 5.725235947598503 2 24.012279063992953 21.494211434833577 34.16441244093849 20.32909706023498 3 21.702941197537022 20.85310008762233 36.80054340170422 20.643415313136426 4 30.580671039028946 20.909326406314538 38.23879114608577 10.271211408570753 5 0.0 0.0 0.0 100.0 6 0.0 0.0 100.0 0.0 7 0.0 0.0 100.0 0.0 8 0.0 0.0 0.0 100.0 9 0.0 0.0 100.0 0.0 10 100.0 0.0 0.0 0.0 11 98.66728105758004 0.7472967197732802 0.20079122726176635 0.3846309953849056 12 97.87092060748299 1.2615705646268411 0.3700670657024231 0.497441762187741 13 90.07724851555356 6.663296270917743 1.9367042065881488 1.3227510069405481 14 38.601635935183346 43.365115329610376 11.125827577397736 6.907421157808534 15 24.349040093782158 53.21641999508169 14.228481793894133 8.206058117242021 16 33.288368195242604 39.85735705264264 16.092784169724695 10.76149058239006 17 17.06283738775627 39.228720546839746 27.35147776135688 16.3569643040471 18 16.684234904248132 44.403332513614885 26.013267501187798 12.899165080949187 19 20.885212358807475 44.06340800729629 23.652657439661162 11.398722194235072 20 17.183586690000787 44.665065430244745 25.471358002879363 12.679989876875105 21 19.546226151565143 45.1808314810084 18.307814622662907 16.96512774476355 22 16.125075505619048 43.60774801059108 19.388112013331966 20.8790644704579 23 11.591634574291561 41.8322020422927 31.26368352819553 15.312479855220214 24 12.50725212072304 42.65536251053497 27.58330687154853 17.254078497193458 25 16.319957597476858 38.92860809420236 21.83986601184692 22.91156829647386 26 17.84081386104101 40.98355469710608 23.952650515825738 17.222980926027176 27 26.82437094567654 44.93067808224084 15.208383570932307 13.036567401150311 28 28.376324780406982 44.375935613105625 12.961181158572543 14.286558447914851 29 30.454430419035294 45.60700548893022 11.062140229155078 12.876423862879408 30 30.60317350415311 48.51746358420697 11.31945621629107 9.559906695348854 31 21.365822038329398 54.89574852629744 12.969119694014225 10.769309741358935 32 17.613461368579635 60.337226598033155 11.934006298302705 10.115305735084506 33 16.05458369842638 59.38758675685162 13.800278385934586 10.757551158787422 34 13.23640361662962 60.5096659130032 15.578689389580344 10.675241080786835 35 14.773733833441169 59.38328920383055 13.913924788047073 11.929052174681205 36 14.255460876748566 59.18202047067756 14.640629066261104 11.921889586312771 37 16.18595750675074 58.721824168005675 15.642555802532213 9.449662522711375 38 16.57679607872162 59.96584639112985 13.523444345494612 9.933913184653916 39 15.174898470309877 60.424371423182436 13.107477025997808 11.293253080509881 40 19.165892709201298 57.75099500290085 12.599768887148647 10.483343400749206 41 19.572548663819138 56.60336928156852 12.072483006759096 11.751599047853253 42 17.64969212807663 58.02884374335968 13.011080524205967 11.310383604357718 43 18.839039926655097 55.789579866441606 13.745484584916065 11.625895621987237 44 18.84208402671168 53.70514727475451 13.200471298314643 14.252297400219174 45 20.00343804241685 52.83214712911521 12.852787321263575 14.311627507204369 46 21.24787808319585 54.95191515675325 10.692073163452655 13.108133596598249 47 21.146646834255318 54.70576086982473 12.225463956661565 11.922128339258386 48 21.153331916732522 55.61391738670576 12.228328992008938 11.00442170455278 49 21.701866809281757 54.63801472150662 11.18265077845398 12.477467690757635 50 19.555179387025685 54.477632430290114 13.799681503570552 12.167506679113654 51 19.857082486755182 53.34427219745823 13.34282774213727 13.455817573649314 52 19.176755968226757 52.416000744909184 12.86114367436008 15.54609961250397 53 17.061404870082587 53.40551232800834 14.17052451634622 15.362558285562846 54 17.76835234204702 52.516814176194906 14.48937907521434 15.22545440654374 55 19.012673006353214 50.112989831512046 14.662057143130003 16.212280019004734 56 18.36463782371915 48.243673643823584 16.284681849762322 17.107006682694948 57 18.929646669515783 45.69158371991414 17.003925098425903 18.37484451214417 58 21.353526261630254 43.16295127291133 17.48214724849168 18.00137521696674 59 23.437839476844545 40.25386600707186 17.99063133441409 18.317663181669506 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 1.0 5 2.0 6 12.5 7 23.0 8 266.5 9 3640.0 10 6770.0 11 11058.0 12 15346.0 13 17868.0 14 19104.5 15 17819.0 16 14734.0 17 11649.0 18 10869.0 19 10384.0 20 10679.0 21 12648.0 22 14617.0 23 19106.0 24 23595.0 25 33280.0 26 55416.5 27 67868.0 28 81019.5 29 94171.0 30 102069.5 31 109955.5 32 109943.0 33 108371.0 34 106799.0 35 102603.0 36 92262.5 37 86118.0 38 81564.5 39 77011.0 40 75103.0 41 73195.0 42 71225.5 43 71282.0 44 73308.0 45 69540.0 46 65772.0 47 67647.0 48 73041.5 49 76561.0 50 78017.5 51 79474.0 52 75492.5 53 62100.0 54 52689.0 55 46829.0 56 40969.0 57 35845.0 58 23186.5 59 15652.0 60 11675.0 61 7698.0 62 9425.0 63 11152.0 64 10125.0 65 5552.5 66 2007.0 67 1371.0 68 735.0 69 537.0 70 517.5 71 696.0 72 417.5 73 139.0 74 99.0 75 40.0 76 21.0 77 19.5 78 18.0 79 16.5 80 15.0 81 10.0 82 6.5 83 8.0 84 7.5 85 7.0 86 4.0 87 3.0 88 5.0 89 2.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 1675372.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.928908064795095 #Duplication Level Percentage of deduplicated Percentage of total 1 92.2167077876952 52.497964796837735 2 3.620415353748535 4.122125856598459 3 1.1262435979267313 1.9234745473480481 4 0.570131855660989 1.2982793598294189 5 0.3850095413782939 1.0959086392596906 6 0.26680488794579865 0.9113346562262598 7 0.19696671604142618 0.7849170048542866 8 0.15415547893313541 0.7020722470295138 9 0.14195792864279422 0.7273358881896936 >10 1.1662206736118201 13.578947480386605 >50 0.07848807104642906 2.9397157439546904 >100 0.05206766641912177 7.113825371502724 >500 0.01979872163824337 7.758132367810303 >1k 0.005031719311376768 4.545966040172474 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGTCTTCTGAGCTACTGCGCTTGGCCCCCTCCCCCCACCACAGCCCTCAGATGATGGA 3277 0.1955983506946517 No Hit TTCACTTCTGGGTGGAGGCTGAGGTGGGCACATTGCTTAAGCCCAGGAGTTCAATACCA 2856 0.17046960316872908 No Hit GGCGCTTCTGGAAAGTTCCTTTCAGCTCTGACACTCTGCGTGGCCTGATTTCCAAAGTC 2812 0.16784332076696995 No Hit ATTACTTCTGGGGAGTGGCCTCAGAGAGAGGGGACCCACAGCTGGAGGCTGGGACCCCA 2323 0.13865577316560143 No Hit TTGGCTTCTGCCGATTTCACCCCCGCGGTGCATGCCTCTCTGGACAAATTCCTTGCCTC 2301 0.13734263196472188 No Hit CTAGCTTCTGGGGACTTCTGATTCTGACAGACTCAGGAAGAAACCATGGTGCTCTCTGG 2285 0.136387620182264 No Hit ATATCTTCTGGGGCGGTGCCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAG 2172 0.12964284946865534 No Hit CTATCTTCTGGGGGTGAAATCCTTGCCCAGGTGGTGGCTGGAGTGGCCGCTGCCCTGGC 2137 0.12755376119452874 No Hit GCTGCTTCTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2005 0.11967491398925134 No Hit CCTGCTTCTGGGGACAGAATACAAAGATCATGAAGAAACGGAAAAGCATTCCAATAGTT 1993 0.11895865515240796 No Hit CTTTCTTCTGGGGAGGAGTTCGAGACCAGCCTGACCAACATGGTGCAACCCTGTCTCTA 1818 0.10851321378177504 No Hit ACTGCTTCTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1798 0.10731944905370269 No Hit ACAACTTCTGGGGAGATTACTGTCATCCAAAAGCAGGGAACTAGGCCCGGCGTGGTGGC 1768 0.1055288019615942 No Hit TAAACTTCTGGGGCGCGGTGCATGCCTCTCTGGATAAATTCCTTGCCTCTGTGAGCACC 1747 0.10427534899711825 No Hit AGTACTTCTGGGGTTCACCGCGTGCGCCGGTAAGGCCAAGCTGTTGGTACAACCGTTGA 1725 0.10296220779623867 No Hit ACACCTTCTGGGGCAGCCTGGCCAACGTGGTGAAACCCCGTCTCTACTAAAAATATAAA 1709 0.10200719601378082 No Hit GTTGCTTCTGGGGCCAACACTTTGGGAGGCCAAGGTGGACAGATCATGAAGTCAAGAGA 1708 0.1019475077773772 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.028590665237332367 0.0 0.0 0.0 0.0 12 0.04769090088648969 0.0 0.0 0.0 0.0 13 0.12821033179496852 0.0 0.0 0.0 0.0 14 0.4253383726121721 0.0 0.0 0.0 0.0 15 0.742820102043009 0.0 0.0 0.0 0.0 16 0.9412237998486306 0.0 0.0 0.0 0.0 17 1.072239478754569 0.0 0.0 0.0 0.0 18 1.2487375938000636 0.0 0.0 0.0 0.0 19 1.4073889261608765 0.0 0.0 0.0 0.0 20 1.556907958351936 0.0 0.0 0.0 0.0 21 1.7015325551578993 0.0 0.0 0.0 0.0 22 1.857438228644146 0.0 0.0 0.0 0.0 23 2.0117920079838987 0.0 0.0 0.0 0.0 24 2.183156934698682 0.0 0.0 0.0 0.0 25 2.3592969203257543 0.0 0.0 0.0 0.0 26 2.555193712202424 0.0 0.0 0.0 0.0 27 2.7466138863488228 0.0 0.0 0.0 0.0 28 2.9369596722399565 0.0 0.0 0.0 0.0 29 3.1515985703473617 0.0 0.0 0.0 0.0 30 3.399424127895178 0.0 0.0 0.0 0.0 31 3.631850120450861 0.0 0.0 0.0 0.0 32 3.8257772005262116 0.0 0.0 0.0 0.0 33 4.008542580394086 0.0 0.0 0.0 0.0 34 4.1798478188724655 0.0 0.0 0.0 0.0 35 4.3454826748925015 0.0 0.0 0.0 0.0 36 4.504850266090158 0.0 0.0 0.0 0.0 37 4.668515410308875 0.0 0.0 0.0 0.0 38 4.835821536948212 0.0 0.0 0.0 0.0 39 5.011543704920459 0.0 0.0 0.0 0.0 40 5.197472561317725 0.0 0.0 0.0 0.0 41 5.386982711899208 0.0 0.0 0.0 0.0 42 5.5963093569666915 0.0 0.0 0.0 0.0 43 5.801696578431536 0.0 0.0 0.0 0.0 44 6.011142599971827 0.0 0.0 0.0 0.0 45 6.222080827422208 0.0 0.0 0.0 0.0 46 6.4195892016817755 0.0 0.0 0.0 0.0 47 6.615127864140024 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATCAG 75 0.0 53.000004 37 TTTAGTC 75 0.0 53.000004 28 ATCTCAG 45 7.6397555E-11 53.000004 44 CCGGCGT 195 0.0 53.000004 47 CCGGCCC 45 7.6397555E-11 53.000004 37 ATTCGAT 75 0.0 53.000004 18 TAAGTAC 75 0.0 53.000004 39 TGACGCG 130 0.0 53.000004 38 CATTCAA 180 0.0 53.000004 43 ACGATCT 45 7.6397555E-11 53.000004 41 GGGACTA 45 7.6397555E-11 53.000004 11 TATCTTT 75 0.0 53.000004 31 CTACGTT 65 0.0 53.000004 53 TAACATT 180 0.0 53.000004 40 ATCCCTA 65 0.0 53.000004 50 TACTGCA 75 0.0 53.000004 16 TATTCAA 75 0.0 53.000004 31 TCCACTA 150 0.0 53.000004 26 TTAACGG 75 0.0 53.000004 32 TTAGTCA 75 0.0 53.000004 29 >>END_MODULE