##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528134_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2317690 Sequences flagged as poor quality 0 Sequence length 52 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.517774163067536 31.0 31.0 33.0 27.0 34.0 2 31.481874625165574 31.0 31.0 34.0 28.0 34.0 3 31.75582584383589 31.0 31.0 34.0 30.0 34.0 4 35.47312841665624 37.0 35.0 37.0 33.0 37.0 5 35.39256716817176 37.0 35.0 37.0 33.0 37.0 6 34.94846636090245 35.0 35.0 37.0 32.0 37.0 7 35.323098861366276 37.0 35.0 37.0 33.0 37.0 8 35.3318152988536 37.0 35.0 37.0 32.0 37.0 9 37.48182198654695 39.0 37.0 39.0 35.0 39.0 10 37.79879276348433 39.0 37.0 39.0 35.0 39.0 11 37.64281547575388 39.0 37.0 39.0 35.0 39.0 12 37.57825723025944 39.0 37.0 39.0 35.0 39.0 13 37.50557063282837 39.0 37.0 39.0 35.0 39.0 14 37.711407910462576 40.0 37.0 40.0 33.0 40.0 15 36.97180727362158 39.0 36.0 40.0 31.0 40.0 16 36.59417394043207 38.0 35.0 40.0 31.0 40.0 17 36.2793043935988 38.0 35.0 40.0 30.0 40.0 18 36.44172171429311 39.0 35.0 40.0 31.0 40.0 19 36.65760433880286 39.0 35.0 40.0 31.0 40.0 20 36.80741557326476 39.0 35.0 40.0 31.0 40.0 21 36.83116680833071 39.0 35.0 40.0 31.0 40.0 22 36.873866220245155 39.0 35.0 40.0 31.0 40.0 23 36.77831159473441 39.0 35.0 40.0 31.0 40.0 24 36.7985131747559 39.0 35.0 40.0 31.0 40.0 25 36.88428348916378 39.0 35.0 40.0 31.0 40.0 26 36.673176309169904 39.0 35.0 40.0 31.0 40.0 27 36.43703601430735 39.0 35.0 40.0 30.0 40.0 28 36.05051452092385 38.0 35.0 40.0 30.0 40.0 29 35.81471551415418 38.0 35.0 40.0 30.0 40.0 30 35.58756865672286 37.0 35.0 40.0 30.0 40.0 31 35.45826189007158 37.0 35.0 40.0 29.0 40.0 32 35.38020270182811 37.0 34.0 40.0 29.0 40.0 33 35.165409524138255 37.0 34.0 40.0 27.0 40.0 34 34.88851313160949 37.0 34.0 40.0 25.0 40.0 35 34.75658824087777 37.0 34.0 40.0 25.0 40.0 36 34.51319503471129 36.0 33.0 40.0 24.0 40.0 37 34.30366097277893 36.0 33.0 40.0 23.0 40.0 38 33.93496714400977 35.0 33.0 40.0 21.0 40.0 39 33.460650043793606 35.0 33.0 40.0 20.0 40.0 40 32.94927578752983 35.0 33.0 40.0 17.0 40.0 41 32.3148686839051 35.0 32.0 40.0 15.0 40.0 42 31.662249481164434 35.0 31.0 39.0 10.0 40.0 43 31.022449939379296 35.0 29.0 39.0 9.0 40.0 44 30.42691127803977 35.0 26.0 39.0 9.0 40.0 45 30.02282962777593 35.0 24.0 39.0 8.0 40.0 46 29.571433194258077 35.0 23.0 39.0 8.0 40.0 47 29.053212034396317 35.0 20.0 38.0 8.0 40.0 48 28.6184938451648 35.0 20.0 38.0 8.0 40.0 49 28.295405338936614 34.0 18.0 38.0 8.0 40.0 50 27.923534208630144 34.0 17.0 37.0 8.0 40.0 51 27.524458836168773 34.0 15.0 37.0 8.0 40.0 52 26.69075243022147 33.0 10.0 36.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 2.0 13 7.0 14 11.0 15 43.0 16 189.0 17 575.0 18 1539.0 19 3137.0 20 5751.0 21 9612.0 22 14312.0 23 20206.0 24 28186.0 25 37865.0 26 50123.0 27 65165.0 28 83164.0 29 104387.0 30 124507.0 31 128157.0 32 115485.0 33 116929.0 34 142494.0 35 188803.0 36 264390.0 37 327825.0 38 404121.0 39 80703.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.615742398681444 23.558068594160563 38.992315624608985 6.833873382549004 2 25.85475192972313 21.56625778253347 34.247418766099 18.331571521644396 3 18.489401084700717 23.053169319451698 36.45957828700128 21.997851308846307 4 20.85196898636142 20.833372884207982 34.51475391445793 23.799904214972667 5 100.0 0.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 0.0 0.0 100.0 0.0 8 0.0 0.0 0.0 100.0 9 0.0 0.0 100.0 0.0 10 0.0 0.0 100.0 0.0 11 99.44336818124944 0.38767048224741013 0.11149032010320621 0.05747101639994995 12 98.73589651765336 0.9339903093166041 0.15847675918694906 0.17163641384309378 13 94.28853729359837 3.6787059529100095 0.9171200635115137 1.1156366899801096 14 45.53283657434773 34.69989515422684 10.820170083143129 8.947098188282299 15 29.329504808667252 41.178155836198975 18.87819337357455 10.614145981559226 16 35.034064089675496 33.19982396265247 18.397801259012205 13.368310688659829 17 20.197049648572502 36.74123804305149 21.62044967187156 21.44126263650445 18 17.46609770935716 46.40935586726439 20.63023959200756 15.49430683137089 19 22.581061315361417 44.933317225340744 21.445361545331775 11.04025991396606 20 19.129995814798356 43.527866108064494 22.70454633708563 14.637591740051517 21 23.815221190064246 44.391743503229506 14.837014441102994 16.956020865603254 22 25.13964335178561 45.791887612234596 17.01841057259599 12.0500584633838 23 16.646143358257575 47.511185706457724 20.494328404575246 15.348342530709456 24 18.038132796016722 48.12882654712235 18.6326471616135 15.200393495247422 25 19.46369013975122 45.205916235562135 19.174134590907325 16.156259033779325 26 19.101389745824505 46.26567832626451 17.59601154597897 17.03692038193201 27 19.954394245994937 49.34892069258615 15.942209700175605 14.754475361243308 28 20.862280978042794 48.19919833972619 15.707795261661396 15.230725420569618 29 22.721934339795226 48.02562033749121 14.14882922219969 15.103616100513872 30 24.262217984286078 48.74072891542872 13.938835651014589 13.05821744927061 31 19.404752145455173 52.009543985606356 14.474886632811119 14.110817236127351 32 19.540490747252655 54.564846894968696 15.727858341710926 10.166804016067722 33 21.783111632703253 53.76581855209282 13.424961923294315 11.026107891909618 34 18.52340045476315 56.09904689583163 13.993674736483309 11.383877912921918 35 19.838718724246988 53.31364418882595 15.673148695468333 11.174488391458738 36 17.651929291665407 52.65708528750609 17.19802907205019 12.49295634877831 37 17.553253454948678 53.822167761866346 17.631175869076536 10.993402914108444 38 16.887374929347757 53.076295794519545 18.23794381474658 11.798385461386122 39 19.800534152539814 52.11943788858734 16.095552036726225 11.98447592214662 40 21.09773093036601 51.044747140471756 15.317104530804379 12.540417398357848 41 22.553490760196578 51.50576651752391 15.416341270834321 10.52440145144519 42 19.77913353382031 51.55288239583379 15.637725493918515 13.030258576427393 43 20.955175195992563 47.54867993562556 17.50984816778775 13.986296700594124 44 20.58868960042111 47.50492947719497 15.899149584284352 16.007231338099572 45 21.10748201873417 46.3472250387239 20.063813538480126 12.481479404061803 46 23.23843999844673 45.89323852629126 17.326087613097524 13.542233862164482 47 25.557128002450717 46.14560187082828 15.079756136497979 13.217513990223024 48 26.178349995038165 46.23366369100268 14.67387786977551 12.914108444183647 49 24.647687999689346 47.24225414097658 13.916442664894788 14.19361519443929 50 22.92955485850135 49.0352031548654 14.346482920494113 13.68875906613913 51 22.53088204203323 49.090473704421214 14.333021240977006 14.045623012568548 52 22.631887784820233 48.14543791447519 15.475710729217454 13.746963571487129 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 7.5 4 15.0 5 27.0 6 39.0 7 376.5 8 714.0 9 3768.5 10 6823.0 11 17767.0 12 28711.0 13 31755.5 14 36216.5 15 37633.0 16 32828.0 17 28023.0 18 30846.0 19 33669.0 20 38212.0 21 42755.0 22 53089.0 23 63423.0 24 78982.0 25 94541.0 26 107546.5 27 120552.0 28 125878.5 29 131205.0 30 122819.0 31 114433.0 32 108957.0 33 103481.0 34 99820.5 35 96160.0 36 91919.0 37 87678.0 38 87479.5 39 90631.0 40 93981.0 41 100878.0 42 107775.0 43 113514.5 44 119254.0 45 126154.0 46 133054.0 47 133733.0 48 134412.0 49 136952.0 50 139492.0 51 126937.5 52 114383.0 53 110204.0 54 106025.0 55 90091.0 56 74157.0 57 62301.5 58 50446.0 59 44296.5 60 38147.0 61 37692.5 62 37238.0 63 31850.5 64 18719.0 65 10975.0 66 9777.0 67 8579.0 68 7908.5 69 7238.0 70 5419.5 71 3601.0 72 2012.0 73 423.0 74 239.0 75 55.0 76 45.0 77 35.0 78 23.0 79 11.0 80 8.0 81 5.0 82 4.0 83 3.0 84 2.0 85 1.0 86 1.0 87 1.0 88 0.5 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2317690.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.66278295074795 #Duplication Level Percentage of deduplicated Percentage of total 1 86.50138313533414 35.173869673715814 2 5.967798960078285 4.853346276147253 3 2.0210418660071117 2.4654356019546535 4 0.9755337669036906 1.5867167129892126 5 0.6187376644351491 1.2579797676189592 6 0.4148695911022048 1.0121851281512704 7 0.3457453938672229 0.9841278934930621 8 0.25824030821934146 0.8400615681805865 9 0.21843789543066983 0.7994063457103953 >10 2.3184889456289564 20.22386799257767 >50 0.20361242329071 5.582993029180588 >100 0.12021150419122288 10.312092736817254 >500 0.02132156036430268 6.1171291160787336 >1k 0.01446820167577682 8.513350083379828 >5k 1.0878347124644225E-4 0.27743807400477133 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CACTGATCTTGGGTTCTCGAGCGGCGGCCCCAGGGTGCGGTTTCTCACGAGT 6272 0.27061427542078537 No Hit TGCGGATCTTGGGGTCCACCATGGTGTTAACCAGCTGAAATTTGCCCGAAGC 3145 0.13569545538877073 No Hit CTAGGATCTTGGGGCCTGGGAAATCCCATGGACAGAGGAGCCTGGTGGGCTA 2950 0.12728190569057984 No Hit ATGAGATCTTGGGGGAGGCCAAGGTGGGCGGATCACCTGAGGTCAGGAGTTT 2829 0.12206119023683062 No Hit TGCGGATCTTGGGGGGAGAAGGAAAGGAAAATGGGGAAAAGGGAGAGGTGGG 2713 0.11705620682662479 No Hit GCATGATCTTGGGCTTTCGCCGCCGGACGCCGCCGAGGTCGCACGCGTGAGG 2454 0.10588128697107896 No Hit AGTAGATCTTGGGCGTCCACCACCACAGCTGGCTAGGTTTTGTATTTTTAAT 2435 0.10506150520561422 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.02472289219006856 0.0 0.0 0.0 0.0 12 0.035423201549819004 0.0 0.0 0.0 0.0 13 0.0830999831729006 0.0 0.0 0.0 0.0 14 0.5045541034392003 0.0 0.0 0.0 0.0 15 0.9776544749297792 0.0 0.0 0.0 0.0 16 1.2388628332520744 0.0 0.0 0.0 0.0 17 1.4375088989467961 0.0 0.0 0.0 0.0 18 1.6938848594937201 0.0 0.0 0.0 0.0 19 1.9373600438367513 0.0 0.0 0.0 0.0 20 2.1962816424974867 0.0 0.0 0.0 0.0 21 2.4237926556183096 0.0 0.0 0.0 0.0 22 2.6384460389439486 0.0 0.0 0.0 0.0 23 2.837955032812844 0.0 0.0 0.0 0.0 24 3.0589509382186573 0.0 0.0 0.0 0.0 25 3.3082077413286504 0.0 0.0 0.0 0.0 26 3.593189770849423 0.0 0.0 0.0 0.0 27 3.8649689993053427 0.0 0.0 0.0 0.0 28 4.16116909509037 0.0 0.0 0.0 0.0 29 4.478252052690395 0.0 0.0 0.0 0.0 30 4.825235471525527 0.0 0.0 0.0 0.0 31 5.13425005069703 0.0 0.0 0.0 0.0 32 5.397788315089594 0.0 0.0 0.0 0.0 33 5.629225651402906 0.0 0.0 0.0 0.0 34 5.850696167304514 0.0 0.0 0.0 0.0 35 6.044509835223865 0.0 0.0 0.0 0.0 36 6.238970699273846 0.0 0.0 0.0 0.0 37 6.4300661434445505 0.0 0.0 0.0 0.0 38 6.6198671953539945 0.0 0.0 0.0 0.0 39 6.8204979958493155 0.0 0.0 0.0 0.0 40 7.017547644421817 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTTT 110 0.0 46.000004 26 CTATGTG 140 0.0 46.000004 23 AATCCCC 55 1.8189894E-12 46.000004 36 TACCCGT 35 1.0201802E-7 46.000004 38 CTGTATA 35 1.0201802E-7 46.000004 36 CTCAAGT 35 1.0201802E-7 46.000004 45 CATGCGT 145 0.0 46.000004 17 CATGCAA 145 0.0 46.000004 30 GACACAA 70 0.0 46.000004 27 TTTCGCA 110 0.0 46.000004 18 CGTGACG 280 0.0 46.000004 23 CTATACA 55 1.8189894E-12 46.000004 40 ATCAGGC 70 0.0 46.000004 20 TAGAAGC 55 1.8189894E-12 46.000004 36 GACAAGT 140 0.0 46.000004 33 CCGTGCA 35 1.0201802E-7 46.000004 38 TATATTA 70 0.0 46.000004 34 GTTAGCT 70 0.0 46.000004 13 CAATTAG 70 0.0 46.000004 20 CTAAGGT 290 0.0 46.000004 15 >>END_MODULE