SRR1528132_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1528132_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2164062
Sequences flagged as poor quality	0
Sequence length	59
%GC	38

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CACTGATCTTGGGTTCTCGAGCGGCGGCCCCAGGGTGCGGTTTCTCACGAGTTGCTACG	4630	0.21394950791613182	No Hit
CTAGGATCTTGGGGCCTGGGAAATCCCATGGACAGAGGAGCCTGGTGGGCTACAGTCCA	2662	0.12300941470253625	No Hit
ATGAGATCTTGGGGGAGGCCAAGGTGGGCGGATCACCTGAGGTCAGGAGTTTGAGACCA	2385	0.11020941174513484	No Hit
TGCGGATCTTGGGGTCCACCATGGTGTTAACCAGCTGAAATTTGCCCGAAGCCTTCAGT	2336	0.10794515129418658	No Hit
GCATGATCTTGGGCTTTCGCCGCCGGACGCCGCCGAGGTCGCACGCGTGAGGTCTGTCC	2294	0.10600435662194521	No Hit
TGCGGATCTTGGGGGGAGAAGGAAAGGAAAATGGGGAAAAGGGAGAGGTGGGCTCTGGG	2201	0.10170688270483932	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCGCAC	350	0.0	53.000004	38
TAGTTCC	150	0.0	53.000004	43
CGTTTAG	75	0.0	53.000004	19
ATCCTTA	35	3.3438482E-8	53.0	36
AACGTTT	80	0.0	53.0	22
CTAGATT	165	0.0	53.0	36
CTAGATA	35	3.3438482E-8	53.0	23
ACTATCC	55	0.0	53.0	49
TCCATAG	65	0.0	53.0	23
TACCCGA	15	0.0066970624	53.0	27
TACTTTG	55	0.0	53.0	50
CTACTAA	120	0.0	53.0	35
TACTTAG	30	7.0133865E-7	53.0	24
TGAAGTA	35	3.3438482E-8	53.0	15
ACGTTTA	80	0.0	53.0	23
ACCATTC	40	1.6025297E-9	53.0	53
TTTACAC	15	0.0066970624	53.0	25
ACTTGCT	80	0.0	53.0	14
CTATCCA	95	0.0	53.0	20
CCAGGTC	45	7.6397555E-11	53.0	16