##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528132_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2164062 Sequences flagged as poor quality 0 Sequence length 59 %GC 38 >>END_MODULE >>Per base sequence quality warn #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.117579810559956 31.0 30.0 31.0 27.0 34.0 2 31.136481764385678 31.0 31.0 34.0 28.0 34.0 3 31.44365364763117 31.0 31.0 34.0 30.0 34.0 4 35.22713073839844 35.0 35.0 37.0 33.0 37.0 5 35.04884656724253 37.0 35.0 37.0 32.0 37.0 6 34.4723871127537 35.0 35.0 37.0 30.0 37.0 7 34.76710694980088 35.0 35.0 37.0 32.0 37.0 8 34.8754374874657 35.0 35.0 37.0 32.0 37.0 9 37.081119210078086 39.0 37.0 39.0 33.0 39.0 10 37.4635398616121 39.0 37.0 39.0 35.0 39.0 11 37.134212420901065 39.0 37.0 39.0 34.0 39.0 12 37.19264882429432 39.0 37.0 39.0 34.0 39.0 13 37.12807304042121 39.0 37.0 39.0 34.0 39.0 14 36.91972919445006 40.0 36.0 40.0 31.0 40.0 15 36.150866749658746 38.0 35.0 40.0 30.0 40.0 16 35.60127205227946 38.0 34.0 40.0 30.0 40.0 17 35.47456449953837 38.0 34.0 40.0 27.0 40.0 18 35.68553581182055 38.0 34.0 40.0 27.0 40.0 19 36.051706928914236 38.0 34.0 40.0 30.0 40.0 20 36.092829595455214 38.0 34.0 40.0 30.0 40.0 21 36.08479193294831 38.0 35.0 40.0 30.0 40.0 22 36.02151786778752 38.0 35.0 40.0 30.0 40.0 23 35.90407391285462 38.0 34.0 40.0 29.0 40.0 24 35.99435690844347 38.0 35.0 40.0 30.0 40.0 25 36.01874992490973 38.0 35.0 40.0 30.0 40.0 26 35.63716011833302 38.0 34.0 40.0 27.0 40.0 27 35.35570746124649 38.0 34.0 40.0 26.0 40.0 28 34.958995167421264 37.0 34.0 40.0 25.0 40.0 29 34.67190496390584 37.0 33.0 40.0 25.0 40.0 30 34.36696222196961 36.0 33.0 40.0 25.0 40.0 31 34.269957145405264 36.0 33.0 40.0 25.0 40.0 32 34.19324122876332 35.0 33.0 40.0 25.0 40.0 33 33.84430205788929 35.0 33.0 40.0 23.0 40.0 34 33.53407157465914 35.0 33.0 39.0 21.0 40.0 35 33.38600049351636 35.0 33.0 39.0 21.0 40.0 36 33.00164921337743 35.0 32.0 39.0 20.0 40.0 37 32.93633084449521 35.0 32.0 39.0 20.0 40.0 38 32.71237099491604 35.0 31.0 39.0 18.0 40.0 39 32.15654634663887 35.0 31.0 39.0 15.0 40.0 40 31.65408107531115 35.0 30.0 39.0 15.0 40.0 41 30.97916325872364 35.0 28.0 38.0 11.0 40.0 42 30.440680535030882 35.0 26.0 38.0 10.0 40.0 43 29.859831649925002 35.0 24.0 38.0 9.0 40.0 44 29.26682692085532 34.0 23.0 38.0 8.0 40.0 45 28.89075821302717 34.0 22.0 38.0 8.0 40.0 46 28.41307966222779 33.0 20.0 38.0 8.0 40.0 47 27.874294729078926 33.0 18.0 37.0 8.0 40.0 48 27.422810437039235 33.0 17.0 37.0 8.0 40.0 49 26.99434997703393 33.0 15.0 36.0 8.0 40.0 50 26.425445758947756 33.0 13.0 35.0 8.0 39.0 51 26.015154371732418 32.0 11.0 35.0 8.0 39.0 52 25.28343226765222 31.0 10.0 35.0 8.0 39.0 53 25.04155888324826 31.0 10.0 35.0 8.0 39.0 54 24.747728114998555 30.0 10.0 35.0 8.0 39.0 55 24.457515080436696 30.0 10.0 35.0 8.0 38.0 56 23.961058879089418 29.0 9.0 35.0 8.0 38.0 57 23.4242054987334 27.0 9.0 35.0 8.0 38.0 58 22.95938979567129 26.0 9.0 35.0 8.0 37.0 59 22.186495118901398 25.0 8.0 34.0 8.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 4.0 13 13.0 14 54.0 15 221.0 16 847.0 17 2304.0 18 5421.0 19 10107.0 20 16751.0 21 24927.0 22 35717.0 23 48336.0 24 63078.0 25 79993.0 26 98810.0 27 116641.0 28 120061.0 29 105298.0 30 97631.0 31 105869.0 32 122629.0 33 140540.0 34 163380.0 35 184475.0 36 216771.0 37 217666.0 38 174401.0 39 12117.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.91228439850614 24.365383246875552 37.98962321781909 6.7327091367992224 2 25.100066449112823 22.09765709115543 34.10424470278578 18.698031756945966 3 18.456680076633663 23.362500704693304 36.332415614709745 21.848403603963288 4 20.929853211229624 21.099626535653783 34.442266441534485 23.528253811582108 5 100.0 0.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 0.0 0.0 100.0 0.0 8 0.0 0.0 0.0 100.0 9 0.0 0.0 100.0 0.0 10 0.0 0.0 100.0 0.0 11 99.41665257280059 0.40502536433799036 0.11792638103714219 0.06039568182427305 12 98.77850080080884 0.9004825185230368 0.14874804880821343 0.1722686318599005 13 94.28357413050088 3.6847835228380705 0.9156854101222608 1.115956936538787 14 45.17754112405282 35.05421748545097 10.960499283292254 8.807742107203953 15 29.34412230333512 41.396179961572265 18.922378379177676 10.337319355914941 16 35.20518358531318 32.86786607777411 18.504321964897493 13.422628372015218 17 20.225991676763417 36.264302963593465 21.55867068503583 21.95103467460729 18 17.44307695435713 46.415952962530646 20.497841559068085 15.643128524044137 19 22.81260888089158 44.73813596837798 21.49069666211042 10.958558488620012 20 19.020850604095447 43.26641288465857 23.0901425190221 14.622593992223884 21 24.021492914713164 44.05358996184028 14.989450394674458 16.9354667287721 22 25.32459790893237 45.43959461420236 17.18513610053686 12.050671376328404 23 16.428226178362728 47.31957772004684 20.870520345535386 15.38167575605505 24 17.71876221660932 48.177455174574476 18.83758413575951 15.266198473056686 25 19.3443625921993 44.97255623914656 19.492094034274434 16.1909871343797 26 18.751080144653894 46.33906052599232 17.87028282923502 17.03957650011876 27 19.809737428964606 49.56479989944835 16.14879795495693 14.476664716630113 28 20.719554245673184 48.52499604909656 15.713736482596156 15.041713222634101 29 22.614370567941215 48.226252297762265 14.07741552691189 15.081961607384631 30 24.213308121486353 49.03117378337589 13.914111518061867 12.841406577075887 31 19.14958998402079 52.509955814574624 14.341640858718465 13.998813342686114 32 19.377864404993943 55.38182362612532 15.476405019819211 9.763906949061534 33 21.621654093089752 54.460546878971115 13.24490703131426 10.672891996624866 34 18.17836087875486 56.9952709303153 13.920257367857298 10.906110823072538 35 19.641720061624852 53.954138097706995 15.731388472234158 10.672753368433991 36 17.31544659995878 53.27171772342937 17.295114465297203 12.117721211314649 37 17.134675439058586 54.732812645848405 17.51590296396314 10.616608951129866 38 16.604838493536693 53.981725107691005 17.96954061390108 11.443895784871229 39 19.37097920484718 53.19293070161576 15.779492454467569 11.65659763906949 40 20.714101536832125 52.288936268923905 14.877577444638831 12.11938474960514 41 22.159023170315823 52.73702879122687 15.032794809021183 10.071153229436124 42 19.091550981441383 53.20508377301575 15.189721921090985 12.513643324451888 43 20.03815047812863 49.081172350884586 17.248442974369496 13.632234196617288 44 19.65410418000963 48.995084244351595 15.523353767128667 15.827457808510106 45 20.143184437414455 47.90643706141506 19.742040662420948 12.208337838749536 46 22.334295412978 47.466800858755434 16.961944713229105 13.236959015037462 47 24.889767483556387 47.54457127383596 14.629340564179769 12.936320678427881 48 25.2715957306214 47.724325828003074 14.216921696328477 12.787156745047046 49 23.981198320565678 48.511780161566534 13.608390147786894 13.898631370080894 50 21.869890973548817 50.39107012645664 14.149779442548319 13.589259457446229 51 21.631773951023582 50.395413809770695 14.125103624572679 13.847708614633037 52 20.249789516196856 50.48339650157897 15.488927766394864 13.777886215829307 53 19.806271724192744 50.21154661927431 14.63299110653946 15.349190549993486 54 18.959900409507675 50.791566969892735 15.1622273299009 15.086305290698695 55 20.552784532051298 48.798879144867385 14.79541713684728 15.852919186234034 56 20.0971136686472 48.020112177932056 15.952870111854466 15.929904041566276 57 21.067002701401346 45.89170735404069 15.998293949064307 17.04299599549366 58 21.321200594068006 43.91084913463663 17.271917348024225 17.496032923271144 59 21.300313946642934 42.338528193739364 18.145968091487212 18.21518976813049 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 6.0 4 14.0 5 16.0 6 254.5 7 493.0 8 2690.5 9 12880.5 10 20873.0 11 23059.5 12 25246.0 13 25905.5 14 21589.0 15 16613.0 16 16599.5 17 16586.0 18 16321.0 19 18278.5 20 20501.0 21 26370.5 22 32240.0 23 40738.5 24 49237.0 25 61452.5 26 83162.0 27 92656.0 28 101357.0 29 110058.0 30 114876.0 31 118338.5 32 116983.0 33 117164.5 34 117346.0 35 111803.5 36 103676.0 37 101091.0 38 101089.0 39 101087.0 40 96681.0 41 92275.0 42 90568.5 43 96177.0 44 103492.0 45 102837.5 46 102183.0 47 100311.0 48 98722.5 49 99006.0 50 92361.5 51 85717.0 52 79565.5 53 65295.0 54 57176.0 55 52694.5 56 48213.0 57 41909.0 58 34779.0 59 33953.0 60 30830.5 61 27708.0 62 24606.0 63 21504.0 64 14145.5 65 7242.0 66 7697.0 67 6110.5 68 4524.0 69 5734.5 70 3937.0 71 929.0 72 1067.5 73 1206.0 74 700.5 75 116.5 76 38.0 77 23.5 78 9.0 79 9.5 80 10.0 81 6.0 82 2.5 83 3.0 84 1.5 85 0.0 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 2164062.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.586198123783646 #Duplication Level Percentage of deduplicated Percentage of total 1 91.65494267029251 50.03094859624618 2 3.911574464385433 4.270359573777523 3 1.23785651066717 2.0270964222028094 4 0.6364830889299822 1.3897276797907923 5 0.3779363384481823 1.0315053924354916 6 0.2596841347414386 0.8505101777159695 7 0.18781832999122508 0.7176602000525432 8 0.14547410007438374 0.6352702438831551 9 0.1195320489679706 0.5872320096396706 >10 1.272179839706279 14.648451584671454 >50 0.1024235101917024 3.7713301883350114 >100 0.07159901612143409 8.555773468350006 >500 0.01606853391582274 6.341481413871741 >1k 0.006427413566329096 5.142653049027709 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CACTGATCTTGGGTTCTCGAGCGGCGGCCCCAGGGTGCGGTTTCTCACGAGTTGCTACG 4630 0.21394950791613182 No Hit CTAGGATCTTGGGGCCTGGGAAATCCCATGGACAGAGGAGCCTGGTGGGCTACAGTCCA 2662 0.12300941470253625 No Hit ATGAGATCTTGGGGGAGGCCAAGGTGGGCGGATCACCTGAGGTCAGGAGTTTGAGACCA 2385 0.11020941174513484 No Hit TGCGGATCTTGGGGTCCACCATGGTGTTAACCAGCTGAAATTTGCCCGAAGCCTTCAGT 2336 0.10794515129418658 No Hit GCATGATCTTGGGCTTTCGCCGCCGGACGCCGCCGAGGTCGCACGCGTGAGGTCTGTCC 2294 0.10600435662194521 No Hit TGCGGATCTTGGGGGGAGAAGGAAAGGAAAATGGGGAAAAGGGAGAGGTGGGCTCTGGG 2201 0.10170688270483932 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0237516300364777 0.0 0.0 0.0 0.0 12 0.03230036847373134 0.0 0.0 0.0 0.0 13 0.0747668042782508 0.0 0.0 0.0 0.0 14 0.4243871016634459 0.0 0.0 0.0 0.0 15 0.8174904415862392 0.0 0.0 0.0 0.0 16 1.041513598039243 0.0 0.0 0.0 0.0 17 1.2108710378907812 0.0 0.0 0.0 0.0 18 1.4308739768084278 0.0 0.0 0.0 0.0 19 1.6468104887937591 0.0 0.0 0.0 0.0 20 1.8642257014817505 0.0 0.0 0.0 0.0 21 2.0578892841332643 0.0 0.0 0.0 0.0 22 2.238475607445628 0.0 0.0 0.0 0.0 23 2.415087922619592 0.0 0.0 0.0 0.0 24 2.6046388689418327 0.0 0.0 0.0 0.0 25 2.804817976564442 0.0 0.0 0.0 0.0 26 3.033970376079798 0.0 0.0 0.0 0.0 27 3.2567920882118906 0.0 0.0 0.0 0.0 28 3.496942324203281 0.0 0.0 0.0 0.0 29 3.766019642690459 0.0 0.0 0.0 0.0 30 4.059726569756319 0.0 0.0 0.0 0.0 31 4.326585837189508 0.0 0.0 0.0 0.0 32 4.555599608513989 0.0 0.0 0.0 0.0 33 4.754300015433938 0.0 0.0 0.0 0.0 34 4.943758542962263 0.0 0.0 0.0 0.0 35 5.120278439342311 0.0 0.0 0.0 0.0 36 5.283397610604502 0.0 0.0 0.0 0.0 37 5.450583208799008 0.0 0.0 0.0 0.0 38 5.609728371922801 0.0 0.0 0.0 0.0 39 5.779825162125669 0.0 0.0 0.0 0.0 40 5.950060580519412 0.0 0.0 0.0 0.0 41 6.1068490643983395 0.0 0.0 0.0 0.0 42 6.267380509430875 0.0 0.0 0.0 0.0 43 6.425462856424631 0.0 0.0 0.0 0.0 44 6.588535818289865 0.0 0.0 0.0 0.0 45 6.749252100910232 0.0 0.0 0.0 0.0 46 6.911862968805885 0.0 0.0 0.0 0.0 47 7.06426155997379 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGCAC 350 0.0 53.000004 38 TAGTTCC 150 0.0 53.000004 43 CGTTTAG 75 0.0 53.000004 19 ATCCTTA 35 3.3438482E-8 53.0 36 AACGTTT 80 0.0 53.0 22 CTAGATT 165 0.0 53.0 36 CTAGATA 35 3.3438482E-8 53.0 23 ACTATCC 55 0.0 53.0 49 TCCATAG 65 0.0 53.0 23 TACCCGA 15 0.0066970624 53.0 27 TACTTTG 55 0.0 53.0 50 CTACTAA 120 0.0 53.0 35 TACTTAG 30 7.0133865E-7 53.0 24 TGAAGTA 35 3.3438482E-8 53.0 15 ACGTTTA 80 0.0 53.0 23 ACCATTC 40 1.6025297E-9 53.0 53 TTTACAC 15 0.0066970624 53.0 25 ACTTGCT 80 0.0 53.0 14 CTATCCA 95 0.0 53.0 20 CCAGGTC 45 7.6397555E-11 53.0 16 >>END_MODULE