##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528124_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2439834 Sequences flagged as poor quality 0 Sequence length 52 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.148800287232657 31.0 31.0 34.0 30.0 34.0 2 31.81960084169661 31.0 31.0 34.0 30.0 34.0 3 32.028759743490745 33.0 31.0 34.0 30.0 34.0 4 35.79311830231073 37.0 35.0 37.0 35.0 37.0 5 35.69215118733488 37.0 35.0 37.0 33.0 37.0 6 35.702810519076294 37.0 35.0 37.0 33.0 37.0 7 35.70165962110537 37.0 35.0 37.0 33.0 37.0 8 35.68369364473157 37.0 35.0 37.0 33.0 37.0 9 37.30464900480934 39.0 37.0 39.0 33.0 39.0 10 37.28763514239083 39.0 37.0 39.0 33.0 39.0 11 37.40385452452913 39.0 37.0 39.0 35.0 39.0 12 37.28685476143049 39.0 37.0 39.0 35.0 39.0 13 37.226579759114756 39.0 37.0 39.0 35.0 39.0 14 37.66205528736791 40.0 38.0 40.0 32.0 40.0 15 37.12180500804563 39.0 37.0 40.0 31.0 40.0 16 36.58081492429403 38.0 35.0 40.0 31.0 40.0 17 36.40842696675266 39.0 35.0 40.0 31.0 40.0 18 36.46665797755093 39.0 35.0 40.0 30.0 40.0 19 36.580303823948675 39.0 35.0 40.0 31.0 40.0 20 36.60877994158619 39.0 35.0 40.0 31.0 40.0 21 36.62069673592548 39.0 35.0 40.0 30.0 40.0 22 36.68312106479375 39.0 35.0 40.0 31.0 40.0 23 36.75701912507162 39.0 35.0 40.0 31.0 40.0 24 36.78264627839435 39.0 35.0 40.0 31.0 40.0 25 36.77576630213367 39.0 35.0 40.0 31.0 40.0 26 36.40404142249022 39.0 35.0 40.0 30.0 40.0 27 36.06593932210142 38.0 35.0 40.0 30.0 40.0 28 35.914503609671804 38.0 35.0 40.0 30.0 40.0 29 35.93584071703239 38.0 35.0 40.0 30.0 40.0 30 35.73319455339995 38.0 35.0 40.0 30.0 40.0 31 35.72562067747232 38.0 35.0 40.0 30.0 40.0 32 35.7325854955706 38.0 35.0 40.0 30.0 40.0 33 35.701664129608815 38.0 35.0 40.0 30.0 40.0 34 35.59068649752401 38.0 35.0 40.0 29.0 40.0 35 35.286364974010525 37.0 34.0 40.0 28.0 40.0 36 35.11075753514378 37.0 34.0 40.0 27.0 40.0 37 34.9144302440248 37.0 34.0 40.0 26.0 40.0 38 34.58600503148985 37.0 33.0 40.0 25.0 40.0 39 34.23703128983365 36.0 33.0 40.0 24.0 40.0 40 33.82899451356117 35.0 33.0 40.0 23.0 40.0 41 33.471721026922324 35.0 33.0 39.0 21.0 40.0 42 33.11223919332217 35.0 33.0 39.0 19.0 40.0 43 32.76128785810838 35.0 33.0 39.0 17.0 40.0 44 32.335142472807576 35.0 32.0 39.0 15.0 40.0 45 32.121866897502045 35.0 32.0 39.0 12.0 40.0 46 31.80550766978409 35.0 31.0 38.0 10.0 40.0 47 31.545887548087286 35.0 31.0 38.0 10.0 40.0 48 31.258271259438143 35.0 31.0 38.0 10.0 40.0 49 30.890881510791306 35.0 30.0 37.0 10.0 40.0 50 30.669950496632147 35.0 29.0 37.0 9.0 40.0 51 30.375381685803216 35.0 29.0 37.0 9.0 40.0 52 29.37350327932146 34.0 26.0 36.0 8.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 1.0 13 4.0 14 14.0 15 34.0 16 154.0 17 448.0 18 1129.0 19 2385.0 20 4439.0 21 7351.0 22 11207.0 23 16193.0 24 22414.0 25 30412.0 26 40102.0 27 52437.0 28 67399.0 29 83309.0 30 96741.0 31 101376.0 32 105593.0 33 121580.0 34 165569.0 35 258181.0 36 273525.0 37 407433.0 38 477057.0 39 93345.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.016728187245526 22.427386453340677 35.728004446204125 12.827880913209668 2 24.4489174263495 23.1745684337541 33.94054677490354 18.435967364992862 3 17.449096946759493 24.294275758104856 37.403897150379905 20.85273014475575 4 20.120959048853322 23.38786163320947 35.09062501793155 21.400554300005656 5 0.0 0.0 100.0 0.0 6 0.0 0.0 0.0 100.0 7 0.0 0.0 100.0 0.0 8 0.0 100.0 0.0 0.0 9 0.0 0.0 0.0 100.0 10 0.0 0.0 0.0 100.0 11 98.48538876005499 0.9921576631852823 0.25038588690869956 0.27206768985103086 12 97.1326327938704 2.471848494610699 0.21214558039604334 0.18337313112285508 13 92.95333207095237 5.234577434366437 1.0774913375254218 0.7345991571557737 14 48.26676732925273 34.845526375974764 6.748901769546617 10.138804525225895 15 34.13625681091418 32.48589863080849 16.75048384439269 16.627360713884634 16 35.4482313140976 26.218832920600338 21.685163826719357 16.647771938582707 17 23.473605171499372 25.43791913712162 25.40463818440107 25.683837506977937 18 22.398654990462465 31.595141308793963 27.360836843818063 18.645366856925513 19 26.947366091299653 29.92174877471172 26.138622545632202 16.99226258835642 20 23.35798255127193 32.626031115231605 25.615759104922713 18.400227228573748 21 26.12567084481977 30.90681579156615 20.09308830026961 22.87442506334447 22 26.493646698914763 32.288426179813875 22.11990651823034 19.09802060304103 23 22.242537811998687 35.374455803140705 21.12643729040582 21.256569094454786 24 22.597766897256125 37.056127589008106 21.60261722723759 18.74348828649818 25 23.60836843818063 34.11240272903812 21.98432352364956 20.294905309131686 26 22.053713490344016 33.20541479461308 19.191469583586425 25.549402131456482 27 24.272675927952474 36.625811428154535 17.573449669116833 21.52806297477615 28 25.062442772746014 33.779470242647655 17.45897466794872 23.699112316657608 29 25.454190735927117 32.94031479190798 15.234315121438591 26.37117935072632 30 27.39399483735369 34.45394235837356 17.798628923115263 20.35343388115749 31 22.524483223038942 38.03541552417091 15.285261210393822 24.154840042396327 32 21.91464665219027 41.88280842057288 16.88885391383184 19.31369101340501 33 25.81134618174843 39.226439175779994 17.173545413335496 17.78866922913608 34 21.038562459577168 42.67614108172933 16.5832593528904 19.7020371058031 35 24.991823214202277 40.42402065058525 17.713459194355025 16.870696940857453 36 23.51287013788643 39.19635516186757 20.191455648212134 17.099319052033866 37 23.058085099232162 40.5392743932579 18.302761581320695 18.09987892618924 38 20.854656505319625 41.53241572992261 21.73340481360617 15.879522951151595 39 21.335549877573637 42.7292594496183 19.42414934786547 16.5110413249426 40 22.2158146824743 43.094530201644865 18.339239472849382 16.35041564303145 41 23.980319972588298 41.70025501734954 16.698554081958033 17.620870928104125 42 22.22339716554487 41.76542338536146 15.966946931635512 20.044232517458155 43 25.06916454152209 38.63250532618203 18.32641073122188 17.971919401074008 44 22.085150055290647 40.88679803625984 16.564733502361225 20.463318406088284 45 21.74639750081358 36.53428880817302 18.250872805281016 23.468440885732388 46 22.13650600819564 36.44219237866182 16.364105098953456 25.05719651418908 47 24.051595313451653 37.33950752387253 17.679440486524904 20.929456676150917 48 26.358719486653598 35.47802842324519 18.046678585510325 20.11657350459089 49 23.844368100452737 38.20952573002918 19.384720435898508 18.56138573361958 50 22.91131281882292 39.86799921634013 16.214586730080818 21.006101234756137 51 20.762068239068725 40.21654751921647 19.889139998868778 19.13224424284603 52 23.896133917307488 36.60216227825336 20.15805173630665 19.343652068132506 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 5.5 6 11.0 7 722.0 8 1433.0 9 2102.5 10 2772.0 11 4468.5 12 6165.0 13 7691.5 14 11956.5 15 14695.0 16 15506.0 17 16317.0 18 16718.0 19 17119.0 20 17516.5 21 17914.0 22 20636.0 23 23358.0 24 29630.0 25 35902.0 26 44968.5 27 54035.0 28 63735.5 29 73436.0 30 76919.0 31 80402.0 32 84351.0 33 88300.0 34 84712.0 35 81124.0 36 77112.5 37 73101.0 38 68987.0 39 65008.5 40 65144.0 41 71940.5 42 78737.0 43 86723.0 44 94709.0 45 100260.5 46 105812.0 47 115261.5 48 124711.0 49 123929.0 50 123147.0 51 139376.5 52 155606.0 53 160399.0 54 165192.0 55 163831.0 56 162470.0 57 167452.5 58 172435.0 59 158450.0 60 144465.0 61 133611.0 62 122757.0 63 105632.5 64 74542.5 65 60577.0 66 51352.0 67 42127.0 68 38832.0 69 35537.0 70 27279.5 71 19022.0 72 15053.0 73 11084.0 74 6279.5 75 1475.0 76 3509.0 77 5543.0 78 3025.0 79 507.0 80 281.0 81 55.0 82 44.5 83 34.0 84 18.5 85 3.0 86 2.0 87 1.0 88 0.5 89 0.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2439834.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.1742234031316 #Duplication Level Percentage of deduplicated Percentage of total 1 86.24758393095405 20.849683619272263 2 5.409772704151732 2.6155410782065465 3 1.8048393971669938 1.308917723816648 4 0.9676107584383747 0.9356495456705151 5 0.6446376381230013 0.7791807139026268 6 0.492646352890972 0.7145605796114618 7 0.37443746127491395 0.6336214387552843 8 0.3113128621878478 0.6020597343037882 9 0.2547768649475792 0.5543129566073041 >10 2.8264382593167 14.425100669518237 >50 0.2590156346655657 4.188379869165817 >100 0.24384493449415928 15.324034074888202 >500 0.11143729914197192 19.419824404122913 >1k 0.05164590224620161 17.6491335921584 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACGTTCTACCGGGACATGATCTCACAAAATATCATTTCAAAACCAATTATTA 3584 0.1468952395941691 No Hit TCTTTCTACCGGGGAGCATCCACAGCGCTCACTACCCTGGCCTGGCCCCTGT 3349 0.137263436774797 No Hit AGACTCTACCGGGATACTACCTTCTGAAGAACCCTGCTTTCTTCTGAAAAAT 3331 0.13652568166522805 No Hit TACTTCTACCGGGGGACCATCTTCGACAGTGACCTTATAGACAGCACCATGC 3127 0.1281644570901135 No Hit TTCTTCTACCGGGCAGGAGGCTGAGAATCACTTAAACCCGGGAGACAGAGGT 3107 0.12734472919059248 No Hit AAAATCTACCGGGTGGCTCAGGCCTGTAATCCCAGCACTTTGGGAGGCCGAG 3079 0.12619711013126303 No Hit TAACTCTACCGGGGGAGAGATAGCTCAGAAGTTAAGAGCACTGACTGTTCTT 3064 0.12558231420662225 No Hit TATGTCTACCGGGGGAGAGATGGCTCAGTGGCTAAAAGCACTGACTGCTCTT 2682 0.10992551132577053 No Hit CGGCTCTACCGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2677 0.10972057935089026 No Hit ATGCTCTACCGGGGGCCCCGCAGCGTCGCGCCCGCGCACGAGTGGTCGGCAC 2612 0.10705646367744691 No Hit GTTATCTACCGGGGCAGAGTTCTATCTACGGGGGAGAGATGGCTCAGTGGCT 2599 0.10652364054275823 No Hit CTGCTCTACCGGATGAAGCAGACTGTTTACTTATTAAAACTTATTTATTGTA 2505 0.10267091941500937 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.018812755294007708 0.0 0.0 0.0 0.0 12 0.04947057873609434 0.0 0.0 0.0 0.0 13 0.06111071490929301 0.0 0.0 0.0 0.0 14 0.10685153170256664 0.0 0.0 0.0 0.0 15 0.1902998318738078 0.0 0.0 0.0 0.0 16 0.28128962872064245 0.0 0.0 0.0 0.0 17 0.3560488131569607 0.0 0.0 0.0 0.0 18 0.45388333796479596 0.0 0.0 0.0 0.0 19 0.5524146314872241 0.0 0.0 0.0 0.0 20 0.6499212651352511 0.0 0.0 0.0 0.0 21 0.7564858920729853 0.0 0.0 0.0 0.0 22 0.8666573217686121 0.0 0.0 0.0 0.0 23 0.9614178669532435 0.0 0.0 0.0 0.0 24 1.0673676979663371 0.0 0.0 0.0 0.0 25 1.1837280733033477 0.0 0.0 0.0 0.0 26 1.3073020541561433 0.0 0.0 0.0 0.0 27 1.4222688920639683 0.0 0.0 0.0 0.0 28 1.541867192604087 0.0 0.0 0.0 0.0 29 1.6776551191597462 0.0 0.0 0.0 0.0 30 1.8437729779976835 0.0 0.0 0.0 0.0 31 1.9946029115095536 0.0 0.0 0.0 0.0 32 2.1122748514857976 0.0 0.0 0.0 0.0 33 2.205477913661339 0.0 0.0 0.0 0.0 34 2.2914263839261197 0.0 0.0 0.0 0.0 35 2.372456486793774 0.0 0.0 0.0 0.0 36 2.4577491747389373 0.0 0.0 0.0 0.0 37 2.542386080364484 0.0 0.0 0.0 0.0 38 2.6323922037318934 0.0 0.0 0.0 0.0 39 2.7340794496674774 0.0 0.0 0.0 0.0 40 2.831995947265265 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACAACGT 70 0.0 46.000004 45 GTACCGC 110 0.0 46.000004 16 AATCATC 150 0.0 46.000004 28 ATCTATG 220 0.0 46.000004 14 ATCTATA 35 1.0201984E-7 46.000004 17 CTACTAA 35 1.0201984E-7 46.000004 19 GATAAAC 35 1.0201984E-7 46.000004 42 TACTTAT 280 0.0 46.000004 28 TACTTAG 70 0.0 46.000004 37 GATCGCG 110 0.0 46.000004 23 CAAGTAC 75 0.0 46.000004 34 CGACGTT 70 0.0 46.000004 34 TGCCACG 70 0.0 46.000004 35 CAACGAC 35 1.0201984E-7 46.000004 28 ACGTTAG 70 0.0 46.000004 36 GCGGTAC 70 0.0 46.000004 44 TTTGTCG 55 1.8189894E-12 46.000004 25 CTTCACA 55 1.8189894E-12 46.000004 26 CACATTA 35 1.0201984E-7 46.000004 41 ATAATAG 70 0.0 46.000004 14 >>END_MODULE