SRR1528123_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1528123_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2275599
Sequences flagged as poor quality	0
Sequence length	59
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACGTTCTACCGGGACATGATCTCACAAAATATCATTTCAAAACCAATTATTACACAGTT	3170	0.1393039810616897	No Hit
AGACTCTACCGGGATACTACCTTCTGAAGAACCCTGCTTTCTTCTGAAAAATCTGAGGA	3161	0.13890848080000034	No Hit
TAACTCTACCGGGGGAGAGATAGCTCAGAAGTTAAGAGCACTGACTGTTCTTCATAAGG	2866	0.12594486111129422	No Hit
TCTTTCTACCGGGGAGCATCCACAGCGCTCACTACCCTGGCCTGGCCCCTGTGAAAGAG	2765	0.1215064692856694	No Hit
TTCTTCTACCGGGCAGGAGGCTGAGAATCACTTAAACCCGGGAGACAGAGGTCGCAGTT	2604	0.11443140904878232	No Hit
AAAATCTACCGGGTGGCTCAGGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGTA	2565	0.11271757458146184	No Hit
TACTTCTACCGGGGGACCATCTTCGACAGTGACCTTATAGACAGCACCATGCTGGGGGG	2411	0.10595012565922203	No Hit
GTTATCTACCGGGGCAGAGTTCTATCTACGGGGGAGAGATGGCTCAGTGGCTAAAAGCA	2383	0.10471968040063298	No Hit
TATGTCTACCGGGGGAGAGATGGCTCAGTGGCTAAAAGCACTGACTGCTCTTCCAGAGG	2329	0.10234667883049695	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGACGTA	215	0.0	53.000004	18
AACGTTA	50	3.6379788E-12	53.0	29
CTTAACA	15	0.006697106	53.0	52
TTAGGTG	20	3.1388993E-4	53.0	36
TACTTTA	35	3.34403E-8	53.0	48
ATTAGGC	15	0.006697106	53.0	41
ATAGGTA	35	3.34403E-8	53.0	52
GATAACG	50	3.6379788E-12	53.0	18
CAACGTC	80	0.0	53.0	23
CGACGAA	15	0.006697106	53.0	32
TCCGATA	70	0.0	53.0	25
ACGTTCC	55	0.0	53.0	43
ACGTTAT	50	3.6379788E-12	53.0	30
ACGTTAG	45	7.6397555E-11	53.0	36
CGTGCGA	55	0.0	53.0	49
TTAGCCA	190	0.0	53.0	31
CGTGCAC	25	1.4791944E-5	53.0	47
TCCGAAC	105	0.0	53.0	30
CGCATTA	15	0.006697106	53.0	21
AACTTAT	210	0.0	53.0	38