##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528123_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2275599 Sequences flagged as poor quality 0 Sequence length 59 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.63178442247514 31.0 31.0 33.0 28.0 34.0 2 31.4050735652459 31.0 31.0 34.0 30.0 34.0 3 31.66720059201995 31.0 31.0 34.0 30.0 34.0 4 35.50399301458649 37.0 35.0 37.0 33.0 37.0 5 35.22184180956311 37.0 35.0 37.0 33.0 37.0 6 35.32533763637618 37.0 35.0 37.0 33.0 37.0 7 35.247675007767185 37.0 35.0 37.0 33.0 37.0 8 35.30664541511927 37.0 35.0 37.0 33.0 37.0 9 36.93332217143706 39.0 37.0 39.0 33.0 39.0 10 36.99253031839089 39.0 37.0 39.0 33.0 39.0 11 36.72352949706868 37.0 37.0 39.0 34.0 39.0 12 36.658814228693196 39.0 37.0 39.0 32.0 39.0 13 36.69364813396385 39.0 37.0 39.0 32.0 39.0 14 36.84765329919727 39.0 36.0 40.0 31.0 40.0 15 36.27511393703372 38.0 36.0 40.0 30.0 40.0 16 35.53335934846166 38.0 34.0 40.0 28.0 40.0 17 35.55133879035805 38.0 34.0 40.0 27.0 40.0 18 35.74232279061469 38.0 34.0 40.0 27.0 40.0 19 35.91495118428159 38.0 35.0 40.0 29.0 40.0 20 35.84271965315506 38.0 34.0 40.0 29.0 40.0 21 35.81966418512225 38.0 34.0 40.0 29.0 40.0 22 35.82516075987026 38.0 34.0 40.0 29.0 40.0 23 35.7779498936324 38.0 34.0 40.0 29.0 40.0 24 35.77673570782902 38.0 34.0 40.0 29.0 40.0 25 35.78741113878148 38.0 34.0 40.0 29.0 40.0 26 35.36330434316415 38.0 34.0 40.0 27.0 40.0 27 35.03028609170597 37.0 34.0 40.0 26.0 40.0 28 34.819405352173206 37.0 33.0 40.0 26.0 40.0 29 34.722048568311024 37.0 33.0 40.0 26.0 40.0 30 34.55143019486298 37.0 33.0 40.0 25.0 40.0 31 34.52260130189897 37.0 33.0 40.0 25.0 40.0 32 34.43567254160333 36.0 33.0 40.0 25.0 40.0 33 34.19668491680652 36.0 33.0 40.0 24.0 40.0 34 34.035954928790176 36.0 33.0 40.0 23.0 40.0 35 33.88274911353011 36.0 33.0 39.0 23.0 40.0 36 33.51796735716618 35.0 32.0 39.0 22.0 40.0 37 33.40942846257183 35.0 32.0 39.0 22.0 40.0 38 33.17930707475263 35.0 32.0 39.0 21.0 40.0 39 32.77160738776911 35.0 31.0 39.0 20.0 40.0 40 32.444029462132825 35.0 31.0 39.0 18.0 40.0 41 32.08530105699642 35.0 31.0 38.0 17.0 40.0 42 31.829250672020862 35.0 31.0 38.0 15.0 40.0 43 31.494261510925256 35.0 30.0 38.0 13.0 40.0 44 31.193581558086464 35.0 29.0 38.0 11.0 40.0 45 31.03161760925365 35.0 29.0 38.0 10.0 40.0 46 30.70328339922807 35.0 28.0 37.0 10.0 40.0 47 30.302054096525794 34.0 27.0 37.0 10.0 40.0 48 30.004063984911227 34.0 26.0 37.0 9.0 40.0 49 29.696406968011498 34.0 26.0 36.0 9.0 39.0 50 29.286211674376723 34.0 25.0 36.0 9.0 39.0 51 28.998193882138285 33.0 24.0 36.0 9.0 39.0 52 28.422873274245593 33.0 23.0 35.0 8.0 39.0 53 28.29126572827638 33.0 23.0 35.0 8.0 38.0 54 28.10868698747011 33.0 23.0 35.0 8.0 38.0 55 27.885385342496637 33.0 22.0 35.0 8.0 38.0 56 27.56304296143565 33.0 20.0 35.0 8.0 38.0 57 27.12688087839729 33.0 20.0 35.0 8.0 37.0 58 26.846971720412956 33.0 18.0 35.0 8.0 37.0 59 26.10683297013226 31.0 15.0 35.0 8.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 3.0 13 12.0 14 37.0 15 183.0 16 643.0 17 1884.0 18 4133.0 19 7675.0 20 12849.0 21 19048.0 22 26914.0 23 35991.0 24 47265.0 25 60326.0 26 74870.0 27 86640.0 28 90442.0 29 88851.0 30 94581.0 31 109041.0 32 130120.0 33 158285.0 34 205750.0 35 246329.0 36 265073.0 37 284878.0 38 210222.0 39 13552.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.231072785670936 22.966744140773486 34.958180241773704 12.844002831781873 2 23.920075549338875 23.856356062733372 33.662653217899994 18.56091517002776 3 17.42657647502921 24.627889184342234 37.21358640076745 20.731947939861108 4 20.090842015662687 23.735816371865166 34.90083270382875 21.272508908643395 5 0.0 0.0 100.0 0.0 6 0.0 0.0 0.0 100.0 7 0.0 0.0 100.0 0.0 8 0.0 100.0 0.0 0.0 9 0.0 0.0 0.0 100.0 10 0.0 0.0 0.0 100.0 11 98.41206644931731 1.0633244257885506 0.25281255616653026 0.27179656872761854 12 97.08054890162985 2.517798610387858 0.20117779977931088 0.20047468820297426 13 92.92744459810362 5.301329452157432 1.0596770344863045 0.7115489152526433 14 48.148421580427836 34.86778645974093 6.817589566527318 10.166202393303916 15 34.35772295558224 32.60618412998072 16.671961975725953 16.36413093871108 16 35.80195807785115 26.17750315411459 21.45733936427288 16.563199403761384 17 23.66484604712869 25.241617701537045 25.153816643442013 25.939719607892254 18 22.442969960876237 31.63865865646803 27.228039738108517 18.690331644547218 19 27.253483588277195 29.84568019233617 26.06236863348947 16.838467585897163 20 23.460240578414737 32.61413807968803 25.844535878245683 18.081085463651547 21 26.235290136794752 30.78358709069568 20.35424518994779 22.62687758256178 22 26.74363980648612 32.114137859965666 22.22966348640512 18.912558847143103 23 22.1341721454439 35.325204484621416 21.331921836843836 21.20870153309085 24 22.52532190425466 37.06597691421028 21.789999028827133 18.618702152707925 25 23.447584570040682 34.181505616762884 22.131799143873767 20.23911066932267 26 21.943541019309638 33.19235946227784 19.23849500724864 25.625604511163875 27 24.265435166740712 36.76921988452271 17.582008077873123 21.383336870863452 28 25.12876829353502 33.90803915804146 17.38997072858619 23.573221819837325 29 25.56030302351161 32.827796109947315 15.056343406724999 26.555557459816075 30 27.403290298510413 34.610623400695815 17.7223227818258 20.263763518967973 31 22.29202069433147 38.309869181696776 15.211203731413136 24.18690639255862 32 21.749833780028908 42.34247773882833 16.777516601123484 19.130171880019283 33 25.726896522629865 39.43708887198491 17.234275458901152 17.601739146484068 34 20.867209029358865 42.98551721986168 16.659833301034148 19.487440449745318 35 25.14937825161639 40.667314408206366 17.574185961586377 16.609121378590867 36 23.504712385618028 39.40149384843287 20.389708380079266 16.70408538586983 37 22.76380856205333 40.98494506281643 18.318781120926843 17.932465254203397 38 20.6111885266253 42.0729662827238 21.634611370456746 15.681233820194155 39 20.87766781405687 43.53930547517379 19.351432304197708 16.23159440657163 40 21.656319940376136 43.95225169285098 18.20689849134228 16.184529875430602 41 23.605433118928246 42.38277482104712 16.642079733731645 17.369712326292987 42 21.66524066850091 42.64042126930096 15.819395244944298 19.874942817253828 43 24.647048974797407 39.427860532545495 18.319220565662054 17.605869926995048 44 21.34435812285029 41.96815871337613 16.172401200738797 20.51508196303479 45 21.08521756249673 37.424080428933216 17.946219874415483 23.544482134154567 46 21.644806488313627 37.13250884712113 16.019210766044456 25.203473898520784 47 23.611277733906544 38.06487874181699 17.57031884791653 20.753524676359937 48 25.93180960265846 36.167136652810974 17.772595259533862 20.1284584849967 49 23.50888711060253 39.089883586695194 19.03824004141327 18.362989261289005 50 22.25264644605662 40.67988252763338 16.053970844599597 21.0135001817104 51 20.12735987315867 41.00502768721554 19.938618359385814 18.92899408023997 52 22.4863431562415 38.190647825034205 20.177192906131527 19.145816112592772 53 20.178071795601948 39.09379464483857 18.97684961190438 21.7512839476551 54 21.415284503113245 38.11005366059661 20.717402319125647 19.757259517164492 55 20.6425209362458 37.69807422133689 20.71252448256481 20.946880359852504 56 20.476938160018527 37.86167949625571 21.461074644522167 20.20030769920359 57 20.99113244468819 35.99918087501357 22.46577714263365 20.54390953766459 58 21.60991457633792 34.87064285051979 21.91348299942125 21.60595957372103 59 21.625602753384936 34.60811856570511 21.344489956270856 22.421788724639093 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 5.5 5 11.0 6 561.5 7 1112.0 8 1589.0 9 3356.5 10 4647.0 11 5494.5 12 6342.0 13 8134.5 14 10246.0 15 10565.0 16 10211.0 17 9857.0 18 9020.0 19 8366.0 20 8549.0 21 10142.5 22 11736.0 23 14829.0 24 17922.0 25 23929.0 26 37826.5 27 45717.0 28 54011.5 29 62306.0 30 68010.5 31 78038.5 32 82362.0 33 83282.0 34 84202.0 35 80965.0 36 74866.5 37 72005.0 38 70979.0 39 69953.0 40 70005.5 41 70058.0 42 77250.5 43 88781.5 44 93120.0 45 86941.0 46 80762.0 47 84424.0 48 94220.5 49 100355.0 50 96829.5 51 93304.0 52 99516.5 53 124629.0 54 143529.0 55 148513.0 56 153497.0 57 144176.5 58 127769.5 59 120683.0 60 108902.0 61 97121.0 62 81369.5 63 65618.0 64 59052.0 65 44742.5 66 36999.0 67 29710.0 68 22421.0 69 19076.5 70 13612.0 71 11492.0 72 10458.5 73 9425.0 74 6458.5 75 2951.5 76 2411.0 77 1532.0 78 653.0 79 474.5 80 296.0 81 233.5 82 91.0 83 11.0 84 8.5 85 6.0 86 3.5 87 1.0 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 2275599.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.06600788538997 #Duplication Level Percentage of deduplicated Percentage of total 1 89.84590270425097 30.606912299929938 2 4.3906561678100955 2.991442552693097 3 1.4467978787190763 1.4785988383502862 4 0.8339359701832801 1.1363547734469581 5 0.5035488073184297 0.857694882039417 6 0.35947851612627874 0.7347598778991659 7 0.26531902523101275 0.6326852003964563 8 0.23305466266565622 0.6351393580876117 9 0.17730962860487182 0.5436208085588219 >10 1.531395521349746 10.774179408396659 >50 0.1257370089098984 2.8612307841531495 >100 0.18511320416835383 16.708196916046447 >500 0.07736882710605406 18.541916374258882 >1k 0.02438207755630929 11.497267925743124 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACGTTCTACCGGGACATGATCTCACAAAATATCATTTCAAAACCAATTATTACACAGTT 3170 0.1393039810616897 No Hit AGACTCTACCGGGATACTACCTTCTGAAGAACCCTGCTTTCTTCTGAAAAATCTGAGGA 3161 0.13890848080000034 No Hit TAACTCTACCGGGGGAGAGATAGCTCAGAAGTTAAGAGCACTGACTGTTCTTCATAAGG 2866 0.12594486111129422 No Hit TCTTTCTACCGGGGAGCATCCACAGCGCTCACTACCCTGGCCTGGCCCCTGTGAAAGAG 2765 0.1215064692856694 No Hit TTCTTCTACCGGGCAGGAGGCTGAGAATCACTTAAACCCGGGAGACAGAGGTCGCAGTT 2604 0.11443140904878232 No Hit AAAATCTACCGGGTGGCTCAGGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGTA 2565 0.11271757458146184 No Hit TACTTCTACCGGGGGACCATCTTCGACAGTGACCTTATAGACAGCACCATGCTGGGGGG 2411 0.10595012565922203 No Hit GTTATCTACCGGGGCAGAGTTCTATCTACGGGGGAGAGATGGCTCAGTGGCTAAAAGCA 2383 0.10471968040063298 No Hit TATGTCTACCGGGGGAGAGATGGCTCAGTGGCTAAAAGCACTGACTGCTCTTCCAGAGG 2329 0.10234667883049695 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.015380565732363216 0.0 0.0 0.0 0.0 12 0.03919847038076568 0.0 0.0 0.0 0.0 13 0.05018458876102512 0.0 0.0 0.0 0.0 14 0.09245917228826345 0.0 0.0 0.0 0.0 15 0.1608367730869982 0.0 0.0 0.0 0.0 16 0.23932160279557163 0.0 0.0 0.0 0.0 17 0.3031729228216395 0.0 0.0 0.0 0.0 18 0.39110581433723607 0.0 0.0 0.0 0.0 19 0.4791265947998747 0.0 0.0 0.0 0.0 20 0.5682020426270182 0.0 0.0 0.0 0.0 21 0.6571896015071197 0.0 0.0 0.0 0.0 22 0.7468363274900367 0.0 0.0 0.0 0.0 23 0.8289246040273353 0.0 0.0 0.0 0.0 24 0.918351607642647 0.0 0.0 0.0 0.0 25 1.012568558871752 0.0 0.0 0.0 0.0 26 1.1179913508487216 0.0 0.0 0.0 0.0 27 1.2164709160093672 0.0 0.0 0.0 0.0 28 1.3168400935314175 0.0 0.0 0.0 0.0 29 1.4360175057204718 0.0 0.0 0.0 0.0 30 1.5715862065328734 0.0 0.0 0.0 0.0 31 1.6984099571145883 0.0 0.0 0.0 0.0 32 1.7967576888546708 0.0 0.0 0.0 0.0 33 1.878538354077322 0.0 0.0 0.0 0.0 34 1.9584733514120898 0.0 0.0 0.0 0.0 35 2.0292678982544814 0.0 0.0 0.0 0.0 36 2.0979531103678637 0.0 0.0 0.0 0.0 37 2.1711646032539127 0.0 0.0 0.0 0.0 38 2.249649432962486 0.0 0.0 0.0 0.0 39 2.3356048231696356 0.0 0.0 0.0 0.0 40 2.422043602585517 0.0 0.0 0.0 0.0 41 2.503296934125916 0.0 0.0 0.0 0.0 42 2.5870990451305347 0.0 0.0 0.0 0.0 43 2.673362046652332 0.0 0.0 0.0 0.0 44 2.762173827638349 0.0 0.0 0.0 0.0 45 2.845580438381279 0.0 0.0 0.0 0.0 46 2.928108159653788 0.0 0.0 0.0 0.0 47 3.006461155941798 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACGTA 215 0.0 53.000004 18 AACGTTA 50 3.6379788E-12 53.0 29 CTTAACA 15 0.006697106 53.0 52 TTAGGTG 20 3.1388993E-4 53.0 36 TACTTTA 35 3.34403E-8 53.0 48 ATTAGGC 15 0.006697106 53.0 41 ATAGGTA 35 3.34403E-8 53.0 52 GATAACG 50 3.6379788E-12 53.0 18 CAACGTC 80 0.0 53.0 23 CGACGAA 15 0.006697106 53.0 32 TCCGATA 70 0.0 53.0 25 ACGTTCC 55 0.0 53.0 43 ACGTTAT 50 3.6379788E-12 53.0 30 ACGTTAG 45 7.6397555E-11 53.0 36 CGTGCGA 55 0.0 53.0 49 TTAGCCA 190 0.0 53.0 31 CGTGCAC 25 1.4791944E-5 53.0 47 TCCGAAC 105 0.0 53.0 30 CGCATTA 15 0.006697106 53.0 21 AACTTAT 210 0.0 53.0 38 >>END_MODULE