##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528121_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 338879 Sequences flagged as poor quality 0 Sequence length 52 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.075457611713915 31.0 31.0 34.0 28.0 34.0 2 31.73998683896022 31.0 31.0 34.0 30.0 34.0 3 31.909737693985168 31.0 31.0 34.0 30.0 34.0 4 35.637903204388586 37.0 35.0 37.0 33.0 37.0 5 35.70674783624834 37.0 35.0 37.0 35.0 37.0 6 35.88802197834625 37.0 35.0 37.0 35.0 37.0 7 35.46201446534014 37.0 35.0 37.0 33.0 37.0 8 35.178314383600046 37.0 35.0 37.0 32.0 37.0 9 36.36957734176505 38.0 35.0 39.0 31.0 39.0 10 37.13864830809817 39.0 37.0 39.0 32.0 39.0 11 37.60690689006991 39.0 37.0 39.0 35.0 39.0 12 37.52663930193373 39.0 37.0 39.0 35.0 39.0 13 37.34710324334054 39.0 37.0 39.0 35.0 39.0 14 37.215770230672305 40.0 37.0 40.0 31.0 40.0 15 36.45861797278675 39.0 36.0 40.0 30.0 40.0 16 36.17039120157933 38.0 35.0 40.0 30.0 40.0 17 36.1681072005052 38.0 35.0 40.0 30.0 40.0 18 36.04100283582046 38.0 35.0 40.0 30.0 40.0 19 36.37358762272079 38.0 35.0 40.0 30.0 40.0 20 36.60347793755293 39.0 35.0 40.0 30.0 40.0 21 36.689535202830506 39.0 35.0 40.0 31.0 40.0 22 36.60776560365204 39.0 35.0 40.0 30.0 40.0 23 36.66495120677292 39.0 35.0 40.0 31.0 40.0 24 36.60446058917785 39.0 35.0 40.0 31.0 40.0 25 36.38982055541948 38.0 35.0 40.0 30.0 40.0 26 35.81887340319111 38.0 35.0 40.0 30.0 40.0 27 35.49391080592188 38.0 34.0 40.0 29.0 40.0 28 35.381437032097004 38.0 34.0 40.0 28.0 40.0 29 35.35507363985376 37.0 34.0 40.0 28.0 40.0 30 34.959215531207306 37.0 33.0 40.0 26.0 40.0 31 34.84953921606237 37.0 33.0 40.0 26.0 40.0 32 34.70792229674899 36.0 33.0 40.0 26.0 40.0 33 34.60041489735274 36.0 33.0 40.0 26.0 40.0 34 34.368252385069596 35.0 33.0 39.0 26.0 40.0 35 33.91931928505455 35.0 33.0 39.0 24.0 40.0 36 33.58339997462221 35.0 33.0 38.0 23.0 40.0 37 33.21819882612968 35.0 33.0 37.0 23.0 40.0 38 32.76696992141738 35.0 33.0 37.0 21.0 40.0 39 32.2210907137946 35.0 32.0 36.0 20.0 40.0 40 31.712366360854464 35.0 31.0 36.0 18.0 40.0 41 31.14472422310028 35.0 31.0 35.0 15.0 39.0 42 30.5836744088598 35.0 30.0 35.0 12.0 39.0 43 30.061358183894548 35.0 28.0 35.0 10.0 39.0 44 29.470153063482837 34.0 25.0 35.0 9.0 38.0 45 29.087458945523327 34.0 24.0 35.0 9.0 38.0 46 28.602920216360413 34.0 23.0 35.0 8.0 37.0 47 28.18584804605774 33.0 23.0 35.0 8.0 37.0 48 27.75943920986547 33.0 21.0 35.0 8.0 36.0 49 27.236355749397276 33.0 20.0 35.0 8.0 36.0 50 26.783114326942655 33.0 18.0 35.0 8.0 35.0 51 26.358889161027978 33.0 17.0 35.0 8.0 35.0 52 25.4775391806515 32.0 12.0 35.0 8.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 1.0 14 6.0 15 16.0 16 38.0 17 115.0 18 252.0 19 580.0 20 1036.0 21 1727.0 22 2515.0 23 3577.0 24 4763.0 25 6223.0 26 8134.0 27 10504.0 28 12984.0 29 15819.0 30 17384.0 31 17752.0 32 17980.0 33 20382.0 34 25563.0 35 36458.0 36 50490.0 37 58436.0 38 24200.0 39 1943.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.14031852076995 25.261228934221357 37.454371619368565 6.144080925640125 2 27.92412631057103 22.012576760436616 32.36789532547015 17.6954016035222 3 17.868619772839274 25.563401686147564 32.68629805918927 23.881680481823896 4 17.65202328854842 26.122008150401765 30.24501370695735 25.980954854092463 5 0.0 100.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 0.0 0.0 0.0 100.0 8 100.0 0.0 0.0 0.0 9 0.0 0.0 0.0 100.0 10 0.0 0.0 0.0 100.0 11 97.162409001443 1.6687372188893383 0.22279338642996466 0.9460603932377043 12 96.03781880848327 3.4124274446041216 0.2906642193821393 0.2590895275304755 13 89.92442730296064 7.011942315693802 2.0980940099563563 0.9655363713891979 14 39.546268727185804 37.88638422563806 14.414584556729688 8.152762490446444 15 35.409098822883685 35.8836044723928 20.355938255247448 8.351358449476066 16 32.79282575786638 36.92232330713912 18.08256044192765 12.202290493066847 17 27.408603070712555 30.86706464549294 19.9386801778806 21.78565210591391 18 16.219063441523378 38.72975309771334 28.012063302830803 17.039120157932476 19 19.89235095712629 42.75508367293341 25.824556847724413 11.528008522215895 20 21.00071116829311 39.99893767391901 23.067525576975854 15.932825580812029 21 21.601220494630827 40.47344332342813 15.216050566721457 22.709285615219592 22 21.87506455106395 43.42110310759888 17.05239923394486 17.651433107392315 23 17.605398977216055 47.12124386580461 17.617497690916224 17.65585946606311 24 16.76852209785794 45.863272731564955 14.492783559913716 22.875421610663395 25 25.014238120391052 37.152493958020415 13.891979142997943 23.94128877859059 26 24.78613310355614 37.60073654608282 12.77889748258228 24.834232867778766 27 18.527261943053418 45.59326485264652 11.981562740683254 23.897910463616807 28 17.333620554829306 46.40446885171403 11.572567199501888 24.689343393954776 29 26.178075360231823 47.27970750621903 11.387545407062698 15.154671726486447 30 26.334768457177933 51.570619601686744 11.049666695192089 11.044945245943243 31 20.48577810959074 54.86796172085021 10.51850365469681 14.127756514862236 32 17.564971568022806 57.977921322950074 12.117304406587602 12.339802702439513 33 13.985522856240722 61.246934746620475 13.23363206336185 11.533910333776953 34 14.521112255406798 62.936623396551575 11.570796656033568 10.971467692008062 35 16.543663077381602 61.35965934743669 12.240062087057622 9.85661548812408 36 15.10775232457603 59.50560524553011 13.079004600462113 12.307637829431744 37 13.056577716530088 60.59065330103075 12.139436199941573 14.213332782497586 38 13.852732096116904 58.01097146769201 13.575051862169094 14.561244574021995 39 14.358812437477683 58.63892421778865 13.181991212202584 13.82027213253108 40 14.919484535778258 57.99887275399184 13.23687805972043 13.844764650509475 41 16.209915633603735 59.264516243260864 11.81926292275414 12.706305200381257 42 15.017749698269883 56.866020024846634 14.019163182138758 14.09706709474473 43 17.19817397950301 54.80215652194441 14.519931893094585 13.479737605457995 44 19.584276393639026 55.45106070308281 12.433051325104241 12.531611578173921 45 17.94209732677445 53.16764981010921 12.272817141221498 16.617435721894836 46 18.06249428262005 55.983994287046414 11.771458249109564 14.182053181223978 47 17.74261609601067 54.88714260842366 12.823751250446325 14.54649004511935 48 18.933306578454257 54.63779106996892 13.240714237235117 13.188188114341697 49 18.56031208779535 57.52731801026325 12.8565063046102 11.0558635973312 50 17.40149138778148 57.16789768619478 12.430100419323711 13.00051050670003 51 17.323587475175508 54.79389398575892 14.347894086089724 13.53462445297584 52 19.42964893073929 52.65950383470206 14.299499231289046 13.611348003269605 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 1.5 8 3.0 9 24.0 10 45.0 11 352.0 12 659.0 13 666.5 14 1532.0 15 2390.0 16 2653.0 17 2916.0 18 2829.0 19 2742.0 20 3042.0 21 3342.0 22 3331.5 23 3321.0 24 4276.0 25 5231.0 26 7375.5 27 9520.0 28 13164.0 29 16808.0 30 19976.5 31 23145.0 32 23762.0 33 24379.0 34 23519.5 35 22660.0 36 20370.0 37 18080.0 38 17334.0 39 15067.0 40 13546.0 41 12439.5 42 11333.0 43 12040.0 44 12747.0 45 12331.5 46 11916.0 47 15236.5 48 18557.0 49 17372.5 50 16188.0 51 16222.0 52 16256.0 53 18421.0 54 20586.0 55 19297.5 56 18009.0 57 15809.5 58 13610.0 59 12464.5 60 11319.0 61 8863.0 62 6407.0 63 6708.0 64 5325.5 65 3642.0 66 3709.5 67 3777.0 68 2407.0 69 1037.0 70 613.0 71 189.0 72 134.5 73 80.0 74 83.5 75 87.0 76 63.0 77 39.0 78 32.0 79 25.0 80 18.5 81 12.0 82 8.0 83 4.0 84 2.5 85 1.0 86 0.5 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 338879.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.20457444991753 #Duplication Level Percentage of deduplicated Percentage of total 1 87.86516251928582 38.84042118137872 2 5.185261477936615 4.58424554087477 3 1.5696613400777029 2.0815863470586637 4 0.7763947896700267 1.3728080512998702 5 0.49682405488017145 1.0980947961230227 6 0.3703924916203453 0.9823825482913205 7 0.2805594720269647 0.8681408448191862 8 0.2280791742571986 0.8065714271142438 9 0.2380929735680686 0.9472318718482741 >10 2.650915878646218 25.09830513616935 >50 0.23605317122150737 6.910867294215457 >100 0.08114327760739316 7.508487011332017 >500 0.014753323201344211 4.625327602266709 >1k 0.0067060560006110045 4.275530347208405 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTAACGCCGGGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAAAGC 2025 0.5975584205571901 No Hit TTCAAACGCCGAGAGACCCAACCTTCGGGAGGCATCACGCTTTAGACTACCA 1950 0.57542662720322 No Hit ACCGAACGCCGGGTAACACCGGGGTCTTATTCTTAGTCATTCAGGAAGTTTT 1805 0.5326384933855447 No Hit CTGCAACGCCGGAGACAGAAAAAGGCCAGGCGCGGTGGCTCATGCCCATAAT 1531 0.451783674999041 No Hit GGACAACGCCGGGAGAGTGGGTAACGCCGGGAAAACCCCCAACACTCCGATG 1368 0.4036839107764128 No Hit GTTGAACGCCGGGGGGCCAACATAGTGAAACCCCATCTCTACTAAAAAATAC 1333 0.39335574054456013 No Hit AGTTAACGCCGGGAGAGTTTGAAACGCCGGGGCATTTTCGCTATTGTTCAAT 1175 0.3467314292121967 No Hit AGTTAACGCCCGGGCAGCACTTTGGGAGGCCGAGGCAGGAGGATCACCTGAG 1144 0.33758362129255576 No Hit ATAGAACGCCGGGGGTACACAATTGCCTATAATGAGCAAAATTGAATTAGGA 1080 0.31869782429716803 No Hit CTAGAACGCCGGGCAGGGATGCTGGGATGGTTTAACATATGCAAGTCAATAA 1012 0.29863166498956856 No Hit CGTAAACGCCGGGTGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCACCT 983 0.29007403822603345 No Hit CGCAAACGCCGGGAGAGTTAAAAACGCCGGGGGGAATTCTCTTGCTTCAACA 932 0.27502441874533384 No Hit AATAAACGCCGGGACGGGAGACATCTCATATGTACCCCGAATTGAGTAAATT 914 0.2697127883403811 No Hit CCACAACGCCGGTATCCACCAGGGACTAGGACTAGGAGGCTATAGTTCTGTC 906 0.2673520637159576 No Hit TCACAACGCCGGGAGAGTTGTCAACGCGGGGCGGGCGCCTGTAGTGCCAGCT 849 0.2505319007669404 No Hit AAACAACGCCGGTCTGTTTCTGATTCACATTGCTAAAGAACCACAGTGGATA 837 0.2469908138303052 No Hit GTTAAACGCCGGGTGCTCCCCAAGTTAAGAAAATGAGATGTTTTATATAAGC 798 0.2354822812862408 No Hit ACATAACGCCGGGGGGAATTCACACCGGCGCACGCCACAGGCGTCATACTTC 782 0.2307608320373939 No Hit CACAAACGCCGGGGAAACCTAGAAGAAAGAGATAAGTTCCTAGACACTTCTA 744 0.2195473900713824 No Hit GTACAACGCCGGGAGAATAGTCAAACTCATAGAAACGGAAAGTACAATGGTG 720 0.212465216198112 No Hit CTAGAACGCCGGGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATA 704 0.20774376694926508 No Hit GGCCAACGCCGGGGTATCAACGGGGCACAAGCCTTGTCCTGTCCTGGGTTCT 704 0.20774376694926508 No Hit TACCAACGCCGGGCGTTTTTGATGTAAATATTAAGAACTTGGTCTATTTCTG 659 0.1944646909368831 No Hit GCTTAACGCCGGGGGAAGAGCTAGCATCTCTGACGAAAAACAGCAGACGGAA 623 0.18384143012697748 No Hit ATTCAACGCCGGGATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGAT 606 0.17882489030007762 No Hit GAATAACGCCCGGCATATATATGTATCTTTTTGTTTTTTTGAGATGTAGTCC 594 0.1752838033634424 No Hit CACAAACGCCGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACT 578 0.17056235411459547 No Hit CTACAACGCCGGGAGTAATATAGATTGGCGCTAGTAGATCACAGAACAACCG 566 0.1670212671779603 No Hit TTCCAACGCCGGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAAC 552 0.1628899990852192 No Hit GTATAACGCCGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACT 529 0.15610291579000174 No Hit CTCTAACGCCGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACT 522 0.1540372817436312 No Hit GAATAACGCCGGGGGAATTCGAGCTCGCATTTTGAAAATTCTATGGAAGAGC 501 0.1478403796045196 No Hit AGCCAACGCCGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACT 498 0.1469551078703608 No Hit AACCAACGCCGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAA 488 0.14400420208983147 No Hit ACACAACGCCGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACT 454 0.13397112243603174 No Hit TCGAAACGCCGGGAAGCAAACACACCAAAAACAAACCAATACTAAACTCCCT 429 0.1265938579847084 No Hit TTTCAACGCCGGGGGGAATTCTCCAGATTACTTCCATTTCCGCCCAAGCTGC 422 0.12452822393833787 No Hit TGCTAACGCCGGGGGAATTCGAGCTCGCATTTTGAAAATTCTATGGAAGAGC 420 0.12393804278223201 No Hit TTTCAACGCCGGGCTGCTGGCCGTGGGCGGACTCGGCTTCGTGATGACACTG 420 0.12393804278223201 No Hit GAATAACGCCGGGACTCCAGCCTGGGTAACAGAGCAAGACTCTGTCTCAAAA 405 0.11951168411143802 No Hit AGGCAACGCCGGGGGGAATTCTCCAGATTACTTCCATTTCCGCCCAAGCTGC 404 0.11921659353338508 No Hit CCTGAACGCCAGGGTTAGAACTTATTTCCAAGTCAAAAATTAGTATCTCCAT 391 0.11538041601869695 No Hit AGGCAACGCCGGGATACTGTTGGTCTTTACAATTCACCTCATCTTATAGATT 373 0.11006878561374414 No Hit GCACAACGCCGGGTATGACCTAAAGTAGCACTGTTTCAGCCAACCCATGAGA 358 0.10564242694295013 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0734775539351804 0.0 0.0 0.0 0.0 12 0.1159705971748028 0.0 0.0 0.0 0.0 13 0.14518456440204322 0.0 0.0 0.0 0.0 14 0.2652864296695871 0.0 0.0 0.0 0.0 15 0.3992575521056188 0.0 0.0 0.0 0.0 16 0.5822137104984375 0.0 0.0 0.0 0.0 17 0.7312344524151688 0.0 0.0 0.0 0.0 18 0.8947146326564939 0.0 0.0 0.0 0.0 19 1.1057043959643413 0.0 0.0 0.0 0.0 20 1.3346946845334176 0.0 0.0 0.0 0.0 21 1.5666358788830232 0.0 0.0 0.0 0.0 22 1.7817569102836115 0.0 0.0 0.0 0.0 23 1.9871399526084532 0.0 0.0 0.0 0.0 24 2.1875064551063947 0.0 0.0 0.0 0.0 25 2.40026676188256 0.0 0.0 0.0 0.0 26 2.668209006754623 0.0 0.0 0.0 0.0 27 2.9119538242263463 0.0 0.0 0.0 0.0 28 3.1716335329129275 0.0 0.0 0.0 0.0 29 3.4823639116026666 0.0 0.0 0.0 0.0 30 3.8807361919741266 0.0 0.0 0.0 0.0 31 4.2537306826330346 0.0 0.0 0.0 0.0 32 4.523738561551468 0.0 0.0 0.0 0.0 33 4.759220842837709 0.0 0.0 0.0 0.0 34 4.957226620711228 0.0 0.0 0.0 0.0 35 5.161134210145804 0.0 0.0 0.0 0.0 36 5.367107433626752 0.0 0.0 0.0 0.0 37 5.597868265664146 0.0 0.0 0.0 0.0 38 5.813874568798893 0.0 0.0 0.0 0.0 39 6.050537212397345 0.0 0.0 0.0 0.0 40 6.306675834147292 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGGTCTA 70 0.0 46.000004 40 TTTTGAT 70 0.0 46.000004 17 CATGATT 35 1.0167241E-7 46.000004 41 CATGAGA 35 1.0167241E-7 46.000004 46 CAGTTAA 35 1.0167241E-7 46.000004 34 TAGTGCC 140 0.0 46.000004 42 TTACCTA 35 1.0167241E-7 46.000004 22 TGACCTA 35 1.0167241E-7 46.000004 16 ATGATTT 35 1.0167241E-7 46.000004 42 CGCCTGT 140 0.0 46.000004 36 TCCTAGT 35 1.0167241E-7 46.000004 34 TCCTACA 70 0.0 46.000004 35 CCTGTAG 140 0.0 46.000004 38 GTACTAC 35 1.0167241E-7 46.000004 34 CCTAAAG 35 1.0167241E-7 46.000004 19 TAAAACT 35 1.0167241E-7 46.000004 27 GATGTAA 70 0.0 46.000004 21 GTTTTTG 70 0.0 46.000004 15 TATGACC 35 1.0167241E-7 46.000004 14 AGAACAA 35 1.0167241E-7 46.000004 43 >>END_MODULE