##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528110_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 660191 Sequences flagged as poor quality 0 Sequence length 52 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.61510229615369 31.0 31.0 33.0 27.0 34.0 2 31.46767374896053 31.0 31.0 34.0 28.0 34.0 3 31.748004744081637 31.0 31.0 34.0 30.0 34.0 4 35.48567611494249 37.0 35.0 37.0 33.0 37.0 5 35.27740759871007 37.0 35.0 37.0 33.0 37.0 6 35.31799888214168 37.0 35.0 37.0 32.0 37.0 7 35.07953607365141 37.0 35.0 37.0 32.0 37.0 8 34.69335995189271 35.0 35.0 37.0 30.0 37.0 9 37.01359455066791 39.0 37.0 39.0 33.0 39.0 10 37.4272763488142 39.0 37.0 39.0 35.0 39.0 11 37.702358862813945 39.0 37.0 39.0 35.0 39.0 12 37.64866531049348 39.0 37.0 39.0 35.0 39.0 13 37.54721739617777 39.0 37.0 39.0 35.0 39.0 14 37.73803187259445 40.0 38.0 40.0 33.0 40.0 15 36.87423488051185 39.0 36.0 40.0 31.0 40.0 16 36.30615382518089 38.0 35.0 40.0 31.0 40.0 17 35.964994978725855 38.0 35.0 40.0 30.0 40.0 18 36.0353624935814 38.0 35.0 40.0 30.0 40.0 19 36.259826322988346 39.0 35.0 40.0 30.0 40.0 20 36.34257964740507 39.0 35.0 40.0 30.0 40.0 21 36.446714662877866 39.0 35.0 40.0 31.0 40.0 22 36.51822275674767 39.0 35.0 40.0 31.0 40.0 23 36.417903303740886 39.0 35.0 40.0 31.0 40.0 24 36.43004221505595 39.0 35.0 40.0 30.0 40.0 25 36.57982614122277 39.0 35.0 40.0 31.0 40.0 26 36.38630487237784 39.0 35.0 40.0 30.0 40.0 27 36.118633849901016 39.0 35.0 40.0 30.0 40.0 28 35.87453782314512 38.0 35.0 40.0 30.0 40.0 29 35.73234715408117 38.0 35.0 40.0 30.0 40.0 30 35.53555107537061 38.0 35.0 40.0 29.0 40.0 31 35.464176276259444 38.0 34.0 40.0 29.0 40.0 32 35.40504338895865 37.0 34.0 40.0 29.0 40.0 33 35.170971733937606 37.0 34.0 40.0 27.0 40.0 34 34.92330249882231 37.0 34.0 40.0 25.0 40.0 35 34.74991176795806 37.0 33.0 40.0 25.0 40.0 36 34.43013158313276 36.0 33.0 40.0 24.0 40.0 37 34.15295422082397 35.0 33.0 40.0 23.0 40.0 38 33.76318519943471 35.0 33.0 40.0 21.0 40.0 39 33.253029805010975 35.0 33.0 40.0 19.0 40.0 40 32.756541667487134 35.0 33.0 39.0 17.0 40.0 41 32.17230922566348 35.0 31.0 39.0 15.0 40.0 42 31.53556470778911 35.0 30.0 39.0 10.0 40.0 43 30.83775755804002 35.0 28.0 39.0 9.0 40.0 44 30.18638091097879 35.0 25.0 38.0 9.0 40.0 45 29.748966586942263 35.0 23.0 38.0 8.0 40.0 46 29.22130262302879 35.0 22.0 38.0 8.0 40.0 47 28.6040403458999 35.0 20.0 38.0 8.0 40.0 48 28.077536652271842 34.0 18.0 37.0 8.0 40.0 49 27.681654248543225 34.0 15.0 37.0 8.0 40.0 50 27.22660260439782 33.0 14.0 37.0 8.0 40.0 51 26.782214540943453 33.0 12.0 36.0 8.0 40.0 52 25.806618084766377 33.0 10.0 35.0 8.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 3.0 14 7.0 15 29.0 16 77.0 17 236.0 18 577.0 19 1139.0 20 2015.0 21 3187.0 22 4522.0 23 6509.0 24 8585.0 25 11553.0 26 15228.0 27 19276.0 28 24355.0 29 30679.0 30 36389.0 31 38089.0 32 35821.0 33 36404.0 34 44200.0 35 56347.0 36 65122.0 37 93669.0 38 102543.0 39 23627.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.792520649327244 24.497910453187032 35.77616174713075 3.933407150354973 2 25.629855602393853 21.673727754543762 34.34672693205451 18.349689711007873 3 18.592346760255744 23.967912316284227 35.4403498381529 21.99939108530713 4 19.52253211570591 25.454603289048173 33.16176682202575 21.861097773220173 5 0.0 100.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 100.0 0.0 0.0 0.0 8 0.0 100.0 0.0 0.0 9 0.0 0.0 0.0 100.0 10 0.0 0.0 100.0 0.0 11 99.3258011696615 0.49000970931139626 0.11481525800866718 0.06937386301842952 12 98.47983386625991 1.2082866927904197 0.17267730096290315 0.1392021399867614 13 95.64338199096927 2.8855285818800924 0.9067073013718757 0.5643821257787519 14 49.72364058280104 28.926174394985694 11.367164956807954 9.983020065405315 15 34.30552673393003 35.647714070625014 21.200682832695385 8.846076362749567 16 39.31135080605461 27.62957992459758 19.740953754292317 13.318115515055492 17 23.155723116492048 32.05738945244634 19.48754224156343 25.29934518949819 18 20.336084557347796 42.83124126199842 21.32428342706883 15.508390753584948 19 24.715726206506904 42.85623402924305 21.754916380259655 10.67312338399039 20 19.46709361381782 40.52690812204347 26.671523846886735 13.334474417251977 21 24.705880570925686 41.41665063595232 15.371612154664332 18.505856638457658 22 24.366130407715342 46.26055187059502 15.19242158708616 14.180896134603472 23 18.575079030159454 45.59635014715438 21.222646173607334 14.605924649078828 24 19.000107544634808 48.18529789106486 15.675009201882487 17.139585362417844 25 23.56636185588716 43.79005469629244 18.072497201567426 14.571086246252978 26 18.47465354723103 45.66648136675598 15.601545613314935 20.25731947269805 27 16.453268826748623 52.77154641611291 15.012473662924819 15.762711094213644 28 16.79347340390887 52.147484591580316 12.342488764615087 18.716553239895728 29 18.990716323003497 50.83498563294562 13.312056662390127 16.862241381660763 30 23.465179016375565 52.700809311244775 12.507441028429653 11.326570643950008 31 17.049611400337174 55.9433557864315 12.046362340595373 14.960670472635949 32 17.36361143971972 58.957634987450604 13.392336460206215 10.286417112623468 33 18.699285509799438 57.46700576045417 12.968519716263929 10.865189013482462 34 17.7230528740925 58.13135895521144 12.200257198295644 11.945330972400411 35 20.138111546506995 56.64936359326316 12.755399573759716 10.457125286470127 36 17.62914065777934 55.48424622571346 16.05035512450185 10.836257992005343 37 16.997353796098402 56.30885607346965 14.484141710504991 12.20964841992696 38 16.772721833529992 55.568615749078674 15.235136498376987 12.423525919014345 39 15.815574583718956 55.64738083372842 15.537170303745432 12.999874278807194 40 18.16444029076434 55.09254140089762 12.948374031151591 13.794644277186451 41 20.081915688035735 54.818529789106485 14.265114186652045 10.834440336205734 42 22.78991988682063 50.66821571333144 14.128790001681333 12.413074398166591 43 23.400652235489428 49.245900050137 14.138332694629282 13.215115019744287 44 19.307291374768816 50.6214110764915 14.86448618657328 15.206811362166404 45 19.608719294870728 47.559115468099385 16.04717422685253 16.784991010177357 46 22.187366989250084 47.821009374559786 16.979177238102306 13.012446398087826 47 24.159523531826395 48.2778468655283 14.073805913743145 13.488823688902151 48 24.211932607381804 47.19285782447807 13.884466767950487 14.71074280018964 49 23.161933440474044 49.29346204356012 12.966550589147685 14.57805392681815 50 21.06087480744209 51.21563305164718 13.264949082916914 14.458543057993822 51 21.668123315828296 50.232129792741794 15.420537389937156 12.67920950149275 52 23.90353700671472 46.46382637751802 14.478688743106161 15.153947872661094 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 1.0 6 2.0 7 7.0 8 12.0 9 101.0 10 190.0 11 388.0 12 586.0 13 968.5 14 2477.0 15 3603.0 16 5090.0 17 6577.0 18 6657.5 19 6738.0 20 7209.5 21 7681.0 22 9811.5 23 11942.0 24 15799.5 25 19657.0 26 26439.5 27 33222.0 28 36826.5 29 40431.0 30 41965.5 31 43500.0 32 40047.0 33 36594.0 34 34907.0 35 33220.0 36 29958.5 37 26697.0 38 25779.5 39 23737.0 40 22612.0 41 22115.0 42 21618.0 43 23700.5 44 25783.0 45 26215.5 46 26648.0 47 33897.5 48 41147.0 49 41378.5 50 41610.0 51 41770.0 52 41930.0 53 43617.0 54 45304.0 55 39675.5 56 34047.0 57 30592.5 58 27138.0 59 21133.5 60 15129.0 61 11852.0 62 8575.0 63 7680.0 64 4661.0 65 2537.0 66 1762.5 67 988.0 68 982.5 69 977.0 70 636.0 71 295.0 72 194.5 73 94.0 74 75.5 75 57.0 76 43.5 77 30.0 78 20.5 79 11.0 80 9.0 81 7.0 82 4.5 83 2.0 84 2.0 85 2.0 86 1.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 660191.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.44626221043379 #Duplication Level Percentage of deduplicated Percentage of total 1 88.08974786075544 40.91439527191646 2 5.476778877549718 5.087518156304789 3 1.6908277457739687 2.3559788649868327 4 0.8338197026137764 1.5491123417530153 5 0.5393685141031158 1.2525825717042685 6 0.3812595431911636 1.0624848427972198 7 0.2818606520366813 0.9163961625909678 8 0.21867114520903128 0.8125165878587606 9 0.19539519874470562 0.8167838972000777 >10 1.9489529681892004 19.9036705826213 >50 0.23073844003598304 7.172573772651354 >100 0.0932143904094509 8.25585340757223 >500 0.00951837085166928 2.985498063629045 >1k 0.0098465905362096 6.914635476413716 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TGATAGGACTGGGCATTACTTAATATAAATCTAGCTTACAGGGTAAGCCAGA 3155 0.4778920039806662 No Hit TTAGAGGACTGGGATGATAGACCTGCCTTAACAGAGGGACGCTCAGTGGCGC 2462 0.37292238155321716 No Hit AGTAAGGACTGGGGCGAAACTACGTCTCAAAAAAAAATTATAGGCAAATATT 2050 0.3105161990999574 No Hit GAGGAGGACTGGGTGTTGTTGTTGTTGGAGACAGAGCCTCACTCTGCCACCC 2031 0.30763824408390905 No Hit AATTAGGACTGGGATCGTCCTCAGATCAGGCGAGATCACCCGCTGAATTTAA 1758 0.26628657464279276 No Hit TCCTAGGACTGGGTACCTATATTTGTATGCATCCTTTTTTTTCATTTCTGTC 1715 0.25977330802752535 No Hit GAGGAGGACTGGGGCCGGGAAAAAAACTTTACCTGATGCGTAAGCAACAAAA 1715 0.25977330802752535 No Hit GTCAAGGACTGGGCCCAGTATATTTTTTGAATGCTCAATATAATTAATCATC 1677 0.2540173979954286 No Hit TGTAAGGACTGGGTGGCTCACTGCAACCTCTACCTCCCGGGTTCAAGTGATT 1665 0.2521997421958191 No Hit GTGTAGGACTGAGCGCTCGGCATCACCCAATTTCCCAAACATCTCACGAGAT 1632 0.24720118874689295 No Hit ATCAAGGACTGGGGTTCGCCGTTGTTGGCGGTGCAGTTTGTGCGGGCATATC 1597 0.24189969266469855 No Hit GTTAAGGACTGGGTTAAGAGGTAGAGGGTTGGGCGCAGTGGCTCATGTCTGT 1580 0.23932468028191844 No Hit TGATAGGACTGGGGCTCTGGCATGCTAACTAGTTACGCGACCCCCGAGCGGT 1536 0.23265994235001689 No Hit GGCTAGGACTGGGGGCACAATCCTGAAGTCAGGAGTTCGAGACCAGCCTGAC 1419 0.2149377983038242 No Hit GCGCAGGACTGGGAAGCTCCAATACTTGGCCACCAGATGAGAAGAGCTGATT 1416 0.2144833843539218 No Hit CTAGAGGACTGGGAGCCCTCTGTATTCATGGTTTCTGCATCTGTGGATTCAA 1414 0.21418044172065356 No Hit ATACAGGACTGGGCCCCCATTAATAAACCCTGTGTGCCAAACTTCACCCTGA 1407 0.2131201425042147 No Hit ATTAAGGACTGGGGGGGCCGAGGTGGGTGGATTACCTGAGGTCAGGAGTTCA 1391 0.21069660143806868 No Hit TGGAAGGACTGGGGCTTTCAACAATTACAATTCTTGTCCCTTTAGCCCAGAA 1366 0.20690981852221554 No Hit TCATAGGACTGGGGGGAATGAGCCACCTCCTGTTGAAGGCCAGCCCCTCTGT 1311 0.19857889610733864 No Hit GCATAGGACTGGGGTGTTATAAACTTGGATTCCTTCGCAAACAATGACAAAG 1271 0.1925200434419736 No Hit ATCTAGGACTGGGCGCTCAGTATGATCCATGAGCGCCGTGAATGACGCATGA 1202 0.18206852259421896 No Hit TAGTAGGACTGGGGAAGATAATGGTGACTTCCTTCAAAAGGTCCCCCTACAG 1180 0.17873615362826817 No Hit CTTTAGGACTGGGGTCCAGGACTGGGTACTGAAAAAAGCTGACCATTCCAGG 1168 0.17691849782865868 No Hit GTCGAGGACTGGGGGGAATTCACACCGGCGCACGCCACAGGCGTCATACTTC 1065 0.16131695221534376 No Hit ATATAGGACTGGGGCAATGGTTTCTGTTATCAGCAAGTAAATCCTGATTGAT 1057 0.16010518168227073 No Hit ACCGAGGACTGGGCTGGTATAATGGTTAGGAGTGAGACTCTGGAGTCAGATA 1044 0.1581360545660271 No Hit TCACAGGACTGGGGACATCTGTGATTGCCAGATCAAGGAAATATTTTAAGTT 1036 0.1569242840329541 No Hit GGCTAGGACTGGGGATGCTATTTTTTTACTCACAACACAACATAACAAACTG 1024 0.1551066282333446 No Hit AGAAAGGACTGGGGGTCTTGTTCCGGGCAAAAGGCCAGCCAAGTCAGGCCCG 1014 0.15359191506700332 No Hit TCATAGGACTGGGCAGAGTGGTCAGCACTGGGTAAGTAGAAAGACTAAACAA 893 0.13526388575427414 No Hit TTTCAGGACTGGGAACAATTTCATTTACAATCACATCAAAAAAGAATAAAAT 878 0.13299181600476226 No Hit TTACAGGACTGGGTGCGGGTAACATTTGGGTTACTTGAATACACGTTAGTGA 843 0.12769031992256788 No Hit ACACAGGACTGGGGAATGGGGAAACCCGGCTGATGAAGAATCAGTCATCCAC 824 0.12481236490651947 No Hit GCTCAGGACTGGGGTTCCCGGGCTGGTCTCAAACTTTCATGCTCAAGTAATC 798 0.1208741106740322 No Hit GTCCAGGACTGGGTCAACGCAGAGTTTACAGGACTGGGTCGCATTGGCTCCT 791 0.11981381145759332 No Hit TGAAAGGACTGGAGGGAGTTGGAGGAGATTGGATTGGGCTTCCCAGGTGGTG 753 0.11405790142549656 No Hit TGCAAGGACTGGGGTGAAGTTACCCTGGGCCGCAGCAACTCCCTGATGAATG 731 0.1107255324595458 No Hit ACCTAGGACTGGGGGGAATTCCTGGAGATTGTCTCGTACGGTTAAGAGCCTC 727 0.11011964719300929 No Hit GTGAAGGACTGGGTCAACGCAGAGTGTGTAGGACTGGGCCAAATCAGTAAAT 717 0.10860493402666804 No Hit ACTTAGGACTGGGACCTTCTCCTGAATGACTACTGGGTAAATAAAGAAATGA 711 0.1076961061268633 No Hit AACAAGGACTGGGGACGGGCCGGGCATGGTGGCTCATGCCTGTAATCCCAGC 705 0.10678727822705854 No Hit GCTGAGGACTGGGGGGAATTCGAGCTCTTGATGATGATACTTAACCAAACCT 683 0.10345490926110777 No Hit TTTTAGGACTGGGAAGCAGTGGTATCAATGCAAAGTCGTCAGGACTGGGGGC 682 0.10330343794447364 No Hit CATCAGGACTGGGGCTACTCCTCAGTTAGCCACATAGCACTTGTTATTGCAT 674 0.10209166741140063 No Hit GGCAAGGACTGGGGGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAA 670 0.10148578214486415 No Hit ACTAAGGACTGGGGGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAA 665 0.10072842556169352 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.03983695627477503 0.0 0.0 0.0 0.0 12 0.08679306443135396 0.0 0.0 0.0 0.0 13 0.11935939750769095 0.0 0.0 0.0 0.0 14 0.5625644699791424 0.0 0.0 0.0 0.0 15 0.9610855040435268 0.0 0.0 0.0 0.0 16 1.1884439503113493 0.0 0.0 0.0 0.0 17 1.36066683732435 0.0 0.0 0.0 0.0 18 1.6080194973878772 0.0 0.0 0.0 0.0 19 1.810536647727703 0.0 0.0 0.0 0.0 20 2.038652450578696 0.0 0.0 0.0 0.0 21 2.278583016127151 0.0 0.0 0.0 0.0 22 2.523512135124532 0.0 0.0 0.0 0.0 23 2.731785195496455 0.0 0.0 0.0 0.0 24 2.9570230433313998 0.0 0.0 0.0 0.0 25 3.2078595436775115 0.0 0.0 0.0 0.0 26 3.5065609800800073 0.0 0.0 0.0 0.0 27 3.817531593129867 0.0 0.0 0.0 0.0 28 4.125169837213776 0.0 0.0 0.0 0.0 29 4.4893068824022135 0.0 0.0 0.0 0.0 30 4.957959136068198 0.0 0.0 0.0 0.0 31 5.352390444583461 0.0 0.0 0.0 0.0 32 5.693200907010244 0.0 0.0 0.0 0.0 33 5.937978554690991 0.0 0.0 0.0 0.0 34 6.1851797434378835 0.0 0.0 0.0 0.0 35 6.400420484374976 0.0 0.0 0.0 0.0 36 6.612025913712849 0.0 0.0 0.0 0.0 37 6.81984456013487 0.0 0.0 0.0 0.0 38 7.030238218939671 0.0 0.0 0.0 0.0 39 7.24350983276052 0.0 0.0 0.0 0.0 40 7.458144688431076 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCTTCGA 55 1.8189894E-12 46.000004 20 TCTGCAT 140 0.0 46.000004 34 TATTTGA 35 1.01868864E-7 46.000004 37 TTTAGCG 75 0.0 46.000004 45 ATCTCTG 35 1.01868864E-7 46.000004 14 GGTACTT 35 1.01868864E-7 46.000004 13 GGTACCT 150 0.0 46.000004 12 GTCGCAT 70 0.0 46.000004 38 ACACGTT 70 0.0 46.000004 41 TACCCGT 55 1.8189894E-12 46.000004 38 ACCGGCG 140 0.0 46.000004 24 TCACCGG 35 1.01868864E-7 46.000004 18 CTACTCC 75 0.0 46.000004 15 TACTTGA 70 0.0 46.000004 32 CTCAAGT 110 0.0 46.000004 42 TTTACAT 70 0.0 46.000004 30 TCATTTA 70 0.0 46.000004 21 ACTGACC 35 1.01868864E-7 46.000004 44 ACGTTAG 70 0.0 46.000004 43 CCGATAT 75 0.0 46.000004 28 >>END_MODULE