##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528108_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 619866 Sequences flagged as poor quality 0 Sequence length 59 %GC 40 >>END_MODULE >>Per base sequence quality warn #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.193574095046348 31.0 30.0 31.0 27.0 34.0 2 31.114021417532175 31.0 31.0 34.0 28.0 34.0 3 31.428389361571696 31.0 31.0 34.0 30.0 34.0 4 35.231554884442765 35.0 35.0 37.0 33.0 37.0 5 34.88528649740428 35.0 35.0 37.0 32.0 37.0 6 34.97645781507616 35.0 35.0 37.0 32.0 37.0 7 34.50769682479762 36.0 35.0 37.0 30.0 37.0 8 34.08400847925197 35.0 35.0 37.0 30.0 37.0 9 36.58930155872398 38.0 35.0 39.0 32.0 39.0 10 36.99311464090626 39.0 37.0 39.0 33.0 39.0 11 37.14828688781124 39.0 37.0 39.0 34.0 39.0 12 37.25970129027887 39.0 37.0 39.0 35.0 39.0 13 37.17035133399799 39.0 37.0 39.0 34.0 39.0 14 36.89730845053608 40.0 36.0 40.0 31.0 40.0 15 35.94789035049511 38.0 34.0 40.0 29.0 40.0 16 35.23096766075248 37.0 33.0 40.0 27.0 40.0 17 35.077410278995785 38.0 33.0 40.0 26.0 40.0 18 35.23517502169824 38.0 33.0 40.0 26.0 40.0 19 35.63926719645859 38.0 34.0 40.0 27.0 40.0 20 35.63919137361946 38.0 34.0 40.0 27.0 40.0 21 35.71827620808368 38.0 34.0 40.0 29.0 40.0 22 35.68030832470244 38.0 34.0 40.0 28.0 40.0 23 35.55981615381389 38.0 34.0 40.0 27.0 40.0 24 35.64155478764765 38.0 34.0 40.0 27.0 40.0 25 35.70438288275208 38.0 34.0 40.0 27.0 40.0 26 35.32892592915243 38.0 34.0 40.0 26.0 40.0 27 35.04175579883394 38.0 33.0 40.0 25.0 40.0 28 34.81545204931388 37.0 33.0 40.0 25.0 40.0 29 34.58998880403184 37.0 33.0 40.0 25.0 40.0 30 34.33035043057693 36.0 33.0 40.0 25.0 40.0 31 34.26618333639851 36.0 33.0 40.0 24.0 40.0 32 34.22317242758919 36.0 33.0 40.0 24.0 40.0 33 33.87295479990837 35.0 33.0 40.0 23.0 40.0 34 33.61103528827198 35.0 33.0 40.0 22.0 40.0 35 33.42795378355967 35.0 32.0 39.0 21.0 40.0 36 32.95687616355793 35.0 31.0 39.0 20.0 40.0 37 32.82363123642852 35.0 31.0 39.0 20.0 40.0 38 32.608712205541195 35.0 31.0 39.0 18.0 40.0 39 32.02137397437511 35.0 31.0 38.0 15.0 40.0 40 31.52788344577699 35.0 30.0 38.0 15.0 40.0 41 30.957310128318056 35.0 28.0 38.0 12.0 40.0 42 30.4006866000071 35.0 26.0 38.0 10.0 40.0 43 29.75887046555223 34.0 24.0 38.0 9.0 40.0 44 29.101815553684183 34.0 22.0 37.0 8.0 40.0 45 28.73010618423982 34.0 22.0 37.0 8.0 40.0 46 28.176607524852145 33.0 20.0 37.0 8.0 40.0 47 27.525426463138807 33.0 18.0 36.0 8.0 40.0 48 27.000261346807214 33.0 15.0 36.0 8.0 40.0 49 26.533073277127638 33.0 13.0 35.0 8.0 40.0 50 25.868687748642447 32.0 10.0 35.0 8.0 39.0 51 25.455309695966548 31.0 10.0 35.0 8.0 39.0 52 24.70354076526217 30.0 10.0 35.0 8.0 39.0 53 24.408944836464656 29.0 10.0 35.0 8.0 39.0 54 24.017539274617416 28.0 9.0 35.0 8.0 38.0 55 23.599705420203723 27.0 9.0 35.0 8.0 38.0 56 22.961144828075746 26.0 9.0 35.0 8.0 38.0 57 22.401014090142063 24.0 9.0 35.0 8.0 37.0 58 21.93646530056496 23.0 8.0 34.0 8.0 37.0 59 21.163309489470304 22.0 8.0 33.0 8.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 2.0 13 5.0 14 18.0 15 86.0 16 343.0 17 864.0 18 1855.0 19 3357.0 20 5425.0 21 7801.0 22 10861.0 23 14296.0 24 19146.0 25 23583.0 26 28858.0 27 34282.0 28 35911.0 29 32755.0 30 31146.0 31 33444.0 32 37637.0 33 41645.0 34 47057.0 35 49595.0 36 52733.0 37 56434.0 38 46692.0 39 4034.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.0469843482301 25.00717897093888 34.95658739146848 3.9892492893625398 2 25.12720491202937 22.042183310586484 34.274665814869664 18.55594596251448 3 18.503192625502933 24.19829447009515 35.39990901259304 21.898603891808875 4 19.58729789986868 25.578754117825465 33.19830414960653 21.635643832699326 5 0.0 100.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 100.0 0.0 0.0 0.0 8 0.0 100.0 0.0 0.0 9 0.0 0.0 0.0 100.0 10 0.0 0.0 100.0 0.0 11 99.28420013357726 0.5243068663227214 0.11470220983244765 0.07679079026757396 12 98.49031887536984 1.202033987990953 0.15826001103464296 0.14938712560456616 13 95.71439633727289 2.848357548244298 0.8798675842843453 0.5573785301984623 14 48.82700454614384 29.501698754246885 11.530879254548564 10.140417445060706 15 33.951692785214874 36.01988171637095 21.178448245265912 8.84997725314826 16 39.069573101283176 27.48803773718836 19.983835215998297 13.458553945530163 17 22.742173308424725 31.844947133735356 19.475499543449715 25.937380014390204 18 20.159518347513817 42.892657445318825 21.24265567074174 15.705168536425615 19 24.77809720165326 42.469985448467895 22.045409814379237 10.706507535499608 20 19.305462793571515 39.99735426688994 27.059074057941558 13.638108881596992 21 24.789067314548628 40.95385131625222 15.706781788321992 18.55029958087716 22 24.501101851045227 45.683260575672804 15.506415902791893 14.309221670490075 23 18.4218847299255 44.96858998557753 21.91489773596229 14.694627548534683 24 18.754375945768924 48.30608550880351 15.931346452297754 17.008192093129807 25 23.498143147067267 43.369857356267325 18.434629419906884 14.697370076758526 26 18.380585481378233 45.433367856923915 15.706781788321992 20.479264873375858 27 16.302233063274965 52.899658958549104 15.06712741140827 15.730980566767656 28 16.473237764290992 52.41519941406692 12.290559572552777 18.82100324908932 29 18.869562131170284 50.65949737523916 13.220921941193742 17.25001855239681 30 23.723998412560135 52.73026750942946 12.306530766326915 11.239203311683493 31 16.91284890605389 56.14842562747433 11.76947921002281 15.169246256448973 32 17.215656287003966 59.42881203356855 13.175589562905532 10.179942116521957 33 18.67984370815628 57.93574740347107 12.829385705942897 10.555023182429752 34 17.555084486001814 58.75463406607234 12.011305669289813 11.678975778636028 35 20.194848564044488 57.051040063497595 12.585139368831328 10.16897200362659 36 17.457805396650244 55.834970784008156 16.265450920037555 10.441772899304043 37 16.843963050078564 56.92891689494181 14.242594367169678 11.984525687809947 38 16.644081140117382 56.26554771515134 14.939196536025529 12.151174608705753 39 15.451081362746141 56.5157630842795 15.264266793145614 12.768888759828737 40 17.55814966460493 56.23586388025799 12.60223983893293 13.603746616204148 41 19.719423230182006 56.167945975420494 13.709414615416883 10.40321617898062 42 22.352411650259896 52.097227465290885 13.571965553845509 11.97839533060371 43 22.953186656470915 50.81001377717119 13.462425750081469 12.774373816276421 44 18.39381414692853 52.46053179235513 14.302446012525289 14.843208048191062 45 18.50916165751953 48.920411830944104 15.588530424317515 16.98189608721885 46 21.293795755856912 49.02091742408843 16.734584571504165 12.950702248550494 47 23.569126230507884 49.5116686509665 13.533570158711722 13.385634959813894 48 23.537506493338885 48.396750265379936 13.36079088060968 14.7049523606715 49 22.430170391665296 50.383953951337865 12.70016422904305 14.485711427953785 50 19.903172621179415 52.690581512778564 12.84148509516573 14.564760770876287 51 20.619456463171073 51.6495500640461 15.232647055976614 12.498346416806214 52 21.273468781962553 48.96558288404268 14.649133845056836 15.111814488937933 53 19.168981683137968 48.85862428331285 14.738346674926516 17.23404735862267 54 19.663443389377704 50.01952034794617 14.43037688790803 15.886659374768094 55 21.198291243591356 47.35233098766508 14.697208751568889 16.75216901717468 56 19.84945133303004 44.54882184214007 18.775670870801108 16.826055954028774 57 21.63612780826824 45.34157382402003 15.726624786647436 17.295673581064293 58 22.93769943826569 41.88937609096159 17.01174124730184 18.16118322347088 59 22.15898274788422 41.332642861521684 18.541104045067804 17.96727034552629 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 2.0 5 4.0 6 4.0 7 4.0 8 78.0 9 316.0 10 480.0 11 695.0 12 910.0 13 1633.0 14 3350.0 15 4344.0 16 4099.0 17 3854.0 18 3646.0 19 3959.0 20 4480.0 21 5199.5 22 5919.0 23 8125.5 24 10332.0 25 13309.5 26 19746.0 27 23205.0 28 25816.5 29 28428.0 30 30586.0 31 33209.0 32 33674.0 33 34019.0 34 34364.0 35 36829.5 36 34242.5 37 29190.0 38 26774.5 39 24359.0 40 24500.0 41 24641.0 42 24806.0 43 25689.5 44 26408.0 45 28548.0 46 30688.0 47 29701.5 48 28494.5 49 28274.0 50 32205.5 51 36137.0 52 33870.0 53 28107.0 54 24611.0 55 23387.5 56 22164.0 57 19072.0 58 13004.0 59 10028.0 60 9273.5 61 8519.0 62 6828.5 63 5138.0 64 3633.5 65 1419.0 66 709.0 67 516.5 68 324.0 69 533.5 70 440.5 71 138.0 72 99.5 73 61.0 74 47.0 75 24.5 76 16.0 77 11.0 78 6.0 79 5.5 80 5.0 81 4.0 82 3.0 83 3.0 84 1.5 85 0.0 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 619866.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.83473739693959 #Duplication Level Percentage of deduplicated Percentage of total 1 93.17908271820056 57.617041107676435 2 3.370124490900374 4.167815257796387 3 0.9981416490614742 1.8515948026399345 4 0.4581948803580934 1.1332944041425943 5 0.27538269932581244 0.8514108448235993 6 0.198566616430416 0.7366988749664163 7 0.15463848379110848 0.6693421025678865 8 0.11283741476044058 0.5581817528209119 9 0.09740782388530435 0.5420868489319621 >10 0.9967794604802725 13.587373822327297 >50 0.09746632955988066 3.9881158190373176 >100 0.04794288777181032 5.821566603710855 >500 0.007639251348255008 3.253170906807759 >1k 0.005795294126262419 5.222306851750629 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TGATAGGACTGGGCATTACTTAATATAAATCTAGCTTACAGGGTAAGCCAGATTTTATC 2869 0.4628419690707346 No Hit TTAGAGGACTGGGATGATAGACCTGCCTTAACAGAGGGACGCTCAGTGGCGCGGATAAA 2193 0.3537861408756086 No Hit AGTAAGGACTGGGGCGAAACTACGTCTCAAAAAAAAATTATAGGCAAATATTCATAACC 1795 0.28957871539978 No Hit GAGGAGGACTGGGTGTTGTTGTTGTTGGAGACAGAGCCTCACTCTGCCACCCAGGCTGG 1704 0.27489812314274376 No Hit GAGGAGGACTGGGGCCGGGAAAAAAACTTTACCTGATGCGTAAGCAACAAAACCATAAA 1580 0.25489379962766145 No Hit GTCAAGGACTGGGCCCAGTATATTTTTTGAATGCTCAATATAATTAATCATCACAGAAA 1572 0.25360319811055937 No Hit AATTAGGACTGGGATCGTCCTCAGATCAGGCGAGATCACCCGCTGAATTTAAGCATATT 1506 0.2429557355944672 No Hit CTAGAGGACTGGGAGCCCTCTGTATTCATGGTTTCTGCATCTGTGGATTCAATCAACCT 1499 0.24182645926700289 No Hit GTGTAGGACTGAGCGCTCGGCATCACCCAATTTCCCAAACATCTCACGAGATCCAGTTT 1477 0.23827730509497214 No Hit TCCTAGGACTGGGTACCTATATTTGTATGCATCCTTTTTTTTCATTTCTGTCTGCTAAA 1471 0.23730935395714559 No Hit GCGCAGGACTGGGAAGCTCCAATACTTGGCCACCAGATGAGAAGAGCTGATTCATTAGA 1425 0.22988839523380858 No Hit ATCAAGGACTGGGGTTCGCCGTTGTTGGCGGTGCAGTTTGTGCGGGCATATCACCCACT 1338 0.21585310373532343 No Hit ATACAGGACTGGGCCCCCATTAATAAACCCTGTGTGCCAAACTTCACCCTGATCCTCTC 1320 0.21294925032184375 No Hit TGTAAGGACTGGGTGGCTCACTGCAACCTCTACCTCCCGGGTTCAAGTGATTCTCCTGC 1230 0.19842998325444533 No Hit TGATAGGACTGGGGCTCTGGCATGCTAACTAGTTACGCGACCCCCGAGCGGTCGGCGTC 1229 0.19826865806480756 No Hit GTTAAGGACTGGGTTAAGAGGTAGAGGGTTGGGCGCAGTGGCTCATGTCTGTAATCCCA 1217 0.1963327557891544 No Hit GGCTAGGACTGGGGGCACAATCCTGAAGTCAGGAGTTCGAGACCAGCCTGACTAACATG 1179 0.19020239858291954 No Hit ATTAAGGACTGGGGGGGCCGAGGTGGGTGGATTACCTGAGGTCAGGAGTTCAAGACCAG 1163 0.18762119554871537 No Hit TCATAGGACTGGGGGGAATGAGCCACCTCCTGTTGAAGGCCAGCCCCTCTGTCTCCACC 1118 0.18036156201501613 No Hit CTTTAGGACTGGGGTCCAGGACTGGGTACTGAAAAAAGCTGACCATTCCAGGAAAGGTG 1100 0.17745770860153645 No Hit TAGTAGGACTGGGGAAGATAATGGTGACTTCCTTCAAAAGGTCCCCCTACAGGCCACCA 1042 0.16810084760254634 No Hit GCATAGGACTGGGGTGTTATAAACTTGGATTCCTTCGCAAACAATGACAAAGCAGTTAG 1034 0.16681024608544429 No Hit TGGAAGGACTGGGGCTTTCAACAATTACAATTCTTGTCCCTTTAGCCCAGAAAAGCCGA 991 0.15987326293102058 No Hit TCACAGGACTGGGGACATCTGTGATTGCCAGATCAAGGAAATATTTTAAGTTTCTTAAA 948 0.15293627977659688 No Hit ATATAGGACTGGGGCAATGGTTTCTGTTATCAGCAAGTAAATCCTGATTGATAAAGATA 947 0.1527749545869591 No Hit ATCTAGGACTGGGCGCTCAGTATGATCCATGAGCGCCGTGAATGACGCATGAGCCTCGT 926 0.14938712560456616 No Hit ACCGAGGACTGGGCTGGTATAATGGTTAGGAGTGAGACTCTGGAGTCAGATATACCCAA 912 0.14712857294963752 No Hit ACACAGGACTGGGGAATGGGGAAACCCGGCTGATGAAGAATCAGTCATCCACAGGTAAA 823 0.13277063107187684 No Hit GGCTAGGACTGGGGATGCTATTTTTTTACTCACAACACAACATAACAAACTGATTAATA 816 0.1316413547444125 No Hit GTCGAGGACTGGGGGGAATTCACACCGGCGCACGCCACAGGCGTCATACTTCCCAAGAA 783 0.1263176234863664 No Hit TCATAGGACTGGGCAGAGTGGTCAGCACTGGGTAAGTAGAAAGACTAAACAATAAACCA 781 0.1259949731070909 No Hit AGAAAGGACTGGGGGTCTTGTTCCGGGCAAAAGGCCAGCCAAGTCAGGCCCGAGGCGGT 767 0.12373642045216224 No Hit TTTCAGGACTGGGAACAATTTCATTTACAATCACATCAAAAAAGAATAAAATGCCTAGG 759 0.12244581893506015 No Hit TTTTAGGACTGGGAAGCAGTGGTATCAATGCAAAGTCGTCAGGACTGGGGGCAGGCGCC 661 0.10663595035055964 No Hit GTCCAGGACTGGGTCAACGCAGAGTTTACAGGACTGGGTCGCATTGGCTCCTGAGGCTT 656 0.10582932440237085 No Hit GCTCAGGACTGGGGTTCCCGGGCTGGTCTCAAACTTTCATGCTCAAGTAATCCTCTTGT 634 0.1022801702303401 No Hit TTACAGGACTGGGTGCGGGTAACATTTGGGTTACTTGAATACACGTTAGTGAGTGTGGG 627 0.1011508939028758 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.03452359058248073 0.0 0.0 0.0 0.0 12 0.0750162131815586 0.0 0.0 0.0 0.0 13 0.10534534883345756 0.0 0.0 0.0 0.0 14 0.503011941290537 0.0 0.0 0.0 0.0 15 0.8351805067546857 0.0 0.0 0.0 0.0 16 1.025544230527243 0.0 0.0 0.0 0.0 17 1.1715435271494161 0.0 0.0 0.0 0.0 18 1.382395550005969 0.0 0.0 0.0 0.0 19 1.567596867710118 0.0 0.0 0.0 0.0 20 1.7616710708443437 0.0 0.0 0.0 0.0 21 1.9697805654770548 0.0 0.0 0.0 0.0 22 2.1633707930423673 0.0 0.0 0.0 0.0 23 2.3369566970925972 0.0 0.0 0.0 0.0 24 2.532482826933563 0.0 0.0 0.0 0.0 25 2.7362365414460545 0.0 0.0 0.0 0.0 26 2.9916143166426292 0.0 0.0 0.0 0.0 27 3.2431202872878977 0.0 0.0 0.0 0.0 28 3.492851680847151 0.0 0.0 0.0 0.0 29 3.8142114586055698 0.0 0.0 0.0 0.0 30 4.189776500082276 0.0 0.0 0.0 0.0 31 4.515653383150552 0.0 0.0 0.0 0.0 32 4.816363536635337 0.0 0.0 0.0 0.0 33 5.02866748619863 0.0 0.0 0.0 0.0 34 5.234034452607499 0.0 0.0 0.0 0.0 35 5.410362884881571 0.0 0.0 0.0 0.0 36 5.590240471327674 0.0 0.0 0.0 0.0 37 5.763987700567542 0.0 0.0 0.0 0.0 38 5.931120597032262 0.0 0.0 0.0 0.0 39 6.1042225255135785 0.0 0.0 0.0 0.0 40 6.284261437149319 0.0 0.0 0.0 0.0 41 6.470430705991295 0.0 0.0 0.0 0.0 42 6.642564683334785 0.0 0.0 0.0 0.0 43 6.798727466904137 0.0 0.0 0.0 0.0 44 6.952954348197836 0.0 0.0 0.0 0.0 45 7.101050872285301 0.0 0.0 0.0 0.0 46 7.245275591821458 0.0 0.0 0.0 0.0 47 7.370786589359636 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTGCATT 15 0.0066948165 53.000004 40 TTGATGC 25 1.477934E-5 53.000004 41 TTTAGCG 30 7.005183E-7 53.000004 45 GTCATAG 15 0.0066948165 53.000004 26 TGTTTAC 15 0.0066948165 53.000004 18 ATGGGCC 15 0.0066948165 53.000004 22 CTATGAG 15 0.0066948165 53.000004 17 CGTGGAG 60 0.0 53.000004 22 CTATGAA 15 0.0066948165 53.000004 23 AGACTAA 60 0.0 53.000004 42 GATACTA 15 0.0066948165 53.000004 13 CCTTAGT 15 0.0066948165 53.000004 37 CCTTACC 15 0.0066948165 53.000004 50 TCGTTCC 15 0.0066948165 53.000004 21 GGAGCTA 15 0.0066948165 53.000004 47 ACTGCAC 50 3.6379788E-12 53.000004 49 TCACCTC 15 0.0066948165 53.000004 33 CAAGTTC 15 0.0066948165 53.000004 49 CCCTCAA 15 0.0066948165 53.000004 52 CTCCGTA 15 0.0066948165 53.000004 17 >>END_MODULE