##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528107_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5359683 Sequences flagged as poor quality 0 Sequence length 52 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.80647624122546 31.0 31.0 33.0 30.0 33.0 2 31.620842501319576 31.0 31.0 34.0 30.0 34.0 3 31.965781931506022 31.0 31.0 34.0 30.0 34.0 4 35.71893095169994 37.0 35.0 37.0 35.0 37.0 5 35.48482139708636 37.0 35.0 37.0 33.0 37.0 6 35.82753494936174 37.0 35.0 37.0 35.0 37.0 7 35.633991973032735 37.0 35.0 37.0 33.0 37.0 8 35.70415563756289 37.0 35.0 37.0 33.0 37.0 9 35.96138540283073 37.0 35.0 39.0 32.0 39.0 10 37.15845470711607 39.0 37.0 39.0 34.0 39.0 11 37.13034464911451 39.0 37.0 39.0 34.0 39.0 12 37.39755634801536 39.0 37.0 39.0 35.0 39.0 13 37.31969316095747 39.0 37.0 39.0 35.0 39.0 14 37.90844906312556 40.0 38.0 40.0 33.0 40.0 15 37.19024744560453 39.0 37.0 40.0 32.0 40.0 16 37.06345655144157 39.0 36.0 40.0 32.0 40.0 17 36.96349168411639 39.0 36.0 40.0 32.0 40.0 18 37.06827530658063 39.0 36.0 40.0 32.0 40.0 19 37.20502238658518 39.0 36.0 40.0 32.0 40.0 20 37.25067228789464 39.0 36.0 40.0 32.0 40.0 21 37.18992242638231 39.0 36.0 40.0 32.0 40.0 22 37.27320496380103 39.0 36.0 40.0 32.0 40.0 23 37.20135985654375 39.0 36.0 40.0 32.0 40.0 24 37.17924810105374 39.0 36.0 40.0 32.0 40.0 25 37.293131142270916 40.0 36.0 40.0 32.0 40.0 26 37.12971364164634 40.0 36.0 40.0 32.0 40.0 27 36.93461721523456 39.0 36.0 40.0 31.0 40.0 28 36.80826459326046 39.0 36.0 40.0 31.0 40.0 29 36.83256640364738 39.0 35.0 40.0 31.0 40.0 30 36.74690163578704 39.0 35.0 40.0 31.0 40.0 31 36.736816524410116 39.0 35.0 40.0 31.0 40.0 32 36.69628483624871 39.0 35.0 40.0 31.0 40.0 33 36.5836285466883 39.0 35.0 40.0 31.0 40.0 34 36.4490657376565 39.0 35.0 40.0 31.0 40.0 35 36.37088182267496 39.0 35.0 40.0 30.0 40.0 36 36.23152283446614 38.0 35.0 40.0 30.0 40.0 37 36.097862317603486 38.0 35.0 40.0 30.0 40.0 38 35.86023930892928 38.0 35.0 40.0 30.0 40.0 39 35.63579655737102 38.0 35.0 40.0 29.0 40.0 40 35.44727122854094 38.0 35.0 40.0 28.0 40.0 41 35.16442950077458 38.0 34.0 40.0 27.0 40.0 42 34.87245663596149 37.0 34.0 40.0 26.0 40.0 43 34.54682748961086 37.0 33.0 40.0 25.0 40.0 44 34.238199908464736 36.0 33.0 40.0 24.0 40.0 45 34.022606374294895 36.0 33.0 40.0 23.0 40.0 46 33.80227095520388 36.0 33.0 40.0 23.0 40.0 47 33.420541476053714 35.0 33.0 39.0 21.0 40.0 48 33.17680280718095 35.0 33.0 39.0 20.0 40.0 49 33.00098065501262 35.0 33.0 39.0 20.0 40.0 50 32.7705573258717 35.0 32.0 39.0 19.0 40.0 51 32.48399261672752 35.0 32.0 39.0 18.0 40.0 52 31.601490050810842 35.0 31.0 38.0 13.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 4.0 13 2.0 14 7.0 15 40.0 16 159.0 17 541.0 18 1246.0 19 2661.0 20 5107.0 21 8605.0 22 13635.0 23 20247.0 24 29337.0 25 41282.0 26 56601.0 27 74870.0 28 98681.0 29 127154.0 30 157896.0 31 184942.0 32 211354.0 33 255955.0 34 339975.0 35 460296.0 36 618540.0 37 986735.0 38 1375102.0 39 288707.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.89307427323594 16.613482551113563 33.50711226764717 13.986330908003328 2 32.822724776819825 18.015766977263397 30.709185599222938 18.452322646693844 3 19.28817431926478 23.948020806454412 36.03196308438391 20.7318417898969 4 17.70905107634164 26.042659612518126 38.66473073127646 17.583558579863773 5 0.0 100.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 0.0 100.0 0.0 0.0 8 100.0 0.0 0.0 0.0 9 0.0 0.0 100.0 0.0 10 0.0 0.0 100.0 0.0 11 99.43412698101734 0.28484893602849276 0.2583361739864093 0.02268790896775052 12 99.35994348919517 0.46508347601901084 0.07935170792750243 0.09562132685832352 13 98.03736526955046 1.1655540075784332 0.28016582323991923 0.5169148996311909 14 52.65578206770811 32.963330107396274 5.697314561327601 8.683573263568013 15 28.93038636799975 31.218581397444588 19.680007194455342 20.171025040100318 16 30.599888090396394 19.990361370252682 25.972170369031154 23.437580170319773 17 21.837000434540624 20.504477596902653 27.603964637460837 30.05455733109589 18 21.538008871047037 26.665494955578527 29.133364790417644 22.66313138295679 19 24.295989147119336 24.510554075679476 26.498395520779866 24.695061256421322 20 24.320934652291935 23.831614668255565 27.316615553569118 24.530835125883378 21 29.97944094827996 25.39806925148372 18.615951726995796 26.006538073240527 22 29.019813298659642 27.655180353017144 19.635415004954584 23.68959134336863 23 24.111892438414735 27.673744883792565 22.888032743727567 25.32632993406513 24 24.139599300928804 31.220894967109064 19.805163850175468 24.834341881786663 25 27.573682995804045 24.70828965071255 24.126874667774196 23.59115268570921 26 25.741074612061944 26.635940968896854 18.779188993080375 28.843795425960828 27 26.930715865098737 31.45941653638844 17.93753473852838 23.672332859984444 28 25.72079356185804 31.600637575020762 17.685840748417398 24.992728114703798 29 26.481846034550927 29.43295340414722 17.67113838635606 26.414062174945798 30 28.760227050741623 29.267775724795662 18.1902362509126 23.781760973550114 31 26.09103933945347 29.212529920146395 18.32580397012286 26.370626770277273 32 25.700139355256646 33.366973382567586 17.784204774797317 23.14868248737845 33 26.755798803772535 33.181290759173635 18.25410196834402 21.80880846870981 34 25.393236876136143 34.93068526627414 16.594209023182902 23.08186883440681 35 25.604014267261704 34.53165047261191 17.96080103991225 21.903534220214144 36 26.922599713453206 32.60677916958895 18.46428230923359 22.006338807724262 37 25.75523589734691 33.38173171808855 18.866544905734166 21.99648747883037 38 24.73890713312709 34.905590498542544 19.386389083085696 20.969113285244667 39 26.630623490232537 33.56306706945168 19.79572299331882 20.01058644699696 40 26.222035892794405 34.54303174273553 18.141688603598386 21.093243760871676 41 26.43684337301292 35.605128139108224 16.80418412805384 21.153844359825012 42 26.74156288720807 35.75032329337388 16.773305436161056 20.734808383256993 43 27.313294461631404 33.59961773858641 17.38007639630926 21.70701140347293 44 26.596069207824417 32.822538198621075 18.532047511018842 22.049345082535666 45 25.573490073946537 31.91295082190495 20.80802166844569 21.70553743570282 46 25.827329713343122 30.726910528103996 20.68038352268222 22.765376235870665 47 27.411322647253577 29.927180394810666 20.01659426499664 22.644902692939116 48 27.029919493373022 30.73133243141432 19.632821567991986 22.60592650722067 49 26.893903986485768 30.1786878067229 20.187779762347883 22.73962844444345 50 25.870615855452645 32.15451361582392 19.726521139403207 22.248349389320225 51 24.793201388962743 32.02762178285544 20.537837778838785 22.641339049343028 52 26.27480020740033 31.521677681310628 19.769937886251853 22.43358422503719 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 3.5 2 7.0 3 10.5 4 14.0 5 163.5 6 313.0 7 1798.5 8 3284.0 9 5753.5 10 8223.0 11 10917.0 12 13611.0 13 15784.5 14 15912.0 15 13866.0 16 16803.0 17 19740.0 18 25407.0 19 31074.0 20 45664.5 21 60255.0 22 82369.0 23 104483.0 24 128786.0 25 153089.0 26 157789.0 27 162489.0 28 148018.0 29 133547.0 30 120519.0 31 107491.0 32 102449.0 33 97407.0 34 98899.5 35 100392.0 36 99695.5 37 98999.0 38 109136.5 39 140352.5 40 161431.0 41 181728.0 42 202025.0 43 208477.5 44 214930.0 45 228728.5 46 242527.0 47 251279.0 48 260031.0 49 285080.5 50 310130.0 51 318265.5 52 326401.0 53 339838.0 54 353275.0 55 387507.5 56 421740.0 57 403502.5 58 385265.0 59 373035.5 60 360806.0 61 311580.0 62 262354.0 63 234672.5 64 185163.0 65 163335.0 66 136070.5 67 108806.0 68 89264.5 69 69723.0 70 51116.0 71 32509.0 72 25215.0 73 17921.0 74 13582.5 75 9244.0 76 6711.5 77 4179.0 78 2250.5 79 322.0 80 208.5 81 95.0 82 92.5 83 90.0 84 60.5 85 31.0 86 18.5 87 6.0 88 3.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 5359683.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.596309525941454 #Duplication Level Percentage of deduplicated Percentage of total 1 81.6816956572621 12.739330080744073 2 7.377569118006119 2.3012570302690065 3 2.655624704377346 1.2425383462261759 4 1.4297704760424574 0.891965715816433 5 0.912757428252752 0.7117823686566109 6 0.6970836615210612 0.6523159530335444 7 0.5177227941748451 0.5652195462610314 8 0.4319467035123333 0.5389419589350729 9 0.3436591069012709 0.48238324223767415 >10 2.9173451096021257 9.466837006054478 >50 0.29482423855928874 3.141892043675015 >100 0.37645220577349175 15.295718850809598 >500 0.2562070785416586 28.415845234223973 >1k 0.10721776629827513 23.42682731592071 >5k 1.2395117491130071E-4 0.12714530713666505 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAACAAAGTTGGGACCTGCTGGGATTTATTCAAGCCAAACTTTAGTGATGAG 6577 0.12271248131652562 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.009272936477773032 0.0 0.0 0.0 0.0 12 0.020896758259770214 0.0 0.0 0.0 0.0 13 0.04849167385459177 0.0 0.0 0.0 0.0 14 0.20794140250458842 0.0 0.0 0.0 0.0 15 0.39603088466239517 0.0 0.0 0.0 0.0 16 0.4852898949434136 0.0 0.0 0.0 0.0 17 0.5474204351264804 0.0 0.0 0.0 0.0 18 0.6470905088976344 0.0 0.0 0.0 0.0 19 0.7238674376824151 0.0 0.0 0.0 0.0 20 0.799543555094583 0.0 0.0 0.0 0.0 21 0.8786153957239635 0.0 0.0 0.0 0.0 22 0.9428542695528821 0.0 0.0 0.0 0.0 23 1.0052087035744466 0.0 0.0 0.0 0.0 24 1.0878628456197876 0.0 0.0 0.0 0.0 25 1.1687258369571485 0.0 0.0 0.0 0.0 26 1.2678921495916828 0.0 0.0 0.0 0.0 27 1.3941309588645447 0.0 0.0 0.0 0.0 28 1.505965931194065 0.0 0.0 0.0 0.0 29 1.621289915840172 0.0 0.0 0.0 0.0 30 1.753238017994721 0.0 0.0 0.0 0.0 31 1.8816224765531842 0.0 0.0 0.0 0.0 32 2.04114683648268 0.0 0.0 0.0 0.0 33 2.154735643880431 0.0 0.0 0.0 0.0 34 2.2541071925335885 0.0 0.0 0.0 0.0 35 2.347806763944808 0.0 0.0 0.0 0.0 36 2.4445102443558695 0.0 0.0 0.0 0.0 37 2.5383777361459625 0.0 0.0 0.0 0.0 38 2.63452148196078 0.0 0.0 0.0 0.0 39 2.7327922192413245 0.0 0.0 0.0 0.0 40 2.8393843441860276 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACCCTA 40 5.6188583E-9 46.000004 28 CATATTA 20 6.3135335E-4 46.000004 36 CGACCTA 80 0.0 46.000004 45 CCTAATT 20 6.3135335E-4 46.000004 27 CGCGACA 40 5.6188583E-9 46.000004 27 TAGTTAG 20 6.3135335E-4 46.000004 39 TAGTTAC 40 5.6188583E-9 46.000004 18 TAGCACA 160 0.0 46.000004 19 CCCAATA 40 5.6188583E-9 46.000004 46 CTAGTTT 20 6.3135335E-4 46.000004 32 TTAAGTG 20 6.3135335E-4 46.000004 39 TATTCTA 20 6.3135335E-4 46.000004 28 TTGACCG 40 5.6188583E-9 46.000004 36 TCTAAAC 40 5.6188583E-9 46.000004 20 ACTAATA 40 5.6188583E-9 46.000004 31 TTAACTA 40 5.6188583E-9 46.000004 28 TATAGGC 40 5.6188583E-9 46.000004 16 CTCTATA 40 5.6188583E-9 46.000004 17 ATATTCG 40 5.6188583E-9 46.000004 15 GATAGGT 20 6.3135335E-4 46.000004 13 >>END_MODULE