##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528106_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5320759 Sequences flagged as poor quality 0 Sequence length 52 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.831561061119288 31.0 31.0 33.0 30.0 33.0 2 31.640791097661065 31.0 31.0 34.0 30.0 34.0 3 31.978989087835025 31.0 31.0 34.0 30.0 34.0 4 35.745133917924115 37.0 35.0 37.0 35.0 37.0 5 35.608664478131786 37.0 35.0 37.0 33.0 37.0 6 35.86972027862942 37.0 35.0 37.0 35.0 37.0 7 35.62013389443123 37.0 35.0 37.0 33.0 37.0 8 35.6889287787701 37.0 35.0 37.0 33.0 37.0 9 35.98137126676852 37.0 35.0 39.0 32.0 39.0 10 37.14070267042728 39.0 37.0 39.0 34.0 39.0 11 37.109651461379855 39.0 37.0 39.0 34.0 39.0 12 37.411273466811785 39.0 37.0 39.0 35.0 39.0 13 37.31307882954293 39.0 37.0 39.0 35.0 39.0 14 37.85438430870483 40.0 38.0 40.0 33.0 40.0 15 37.18946469855147 39.0 37.0 40.0 32.0 40.0 16 37.038695795092394 39.0 36.0 40.0 32.0 40.0 17 36.956352467758826 39.0 36.0 40.0 32.0 40.0 18 36.98150545814986 39.0 36.0 40.0 32.0 40.0 19 37.18910290806255 39.0 36.0 40.0 32.0 40.0 20 37.24347391039512 39.0 36.0 40.0 32.0 40.0 21 37.2251943754641 39.0 36.0 40.0 32.0 40.0 22 37.24053335247847 39.0 36.0 40.0 32.0 40.0 23 37.26070660219717 39.0 36.0 40.0 32.0 40.0 24 37.29585064837554 39.0 36.0 40.0 32.0 40.0 25 37.322276201571995 40.0 37.0 40.0 32.0 40.0 26 37.0387786780044 40.0 36.0 40.0 31.0 40.0 27 36.813224203539384 39.0 36.0 40.0 31.0 40.0 28 36.72611050415927 39.0 36.0 40.0 31.0 40.0 29 36.75013264085067 39.0 35.0 40.0 31.0 40.0 30 36.552444679415096 39.0 35.0 40.0 30.0 40.0 31 36.588810731702 39.0 35.0 40.0 30.0 40.0 32 36.633536305628574 39.0 35.0 40.0 31.0 40.0 33 36.62748209418994 39.0 35.0 40.0 31.0 40.0 34 36.53817716607725 39.0 35.0 40.0 31.0 40.0 35 36.28541134826817 39.0 35.0 40.0 30.0 40.0 36 36.19808997175027 38.0 35.0 40.0 30.0 40.0 37 36.07237708003689 38.0 35.0 40.0 30.0 40.0 38 35.88889010007783 38.0 35.0 40.0 30.0 40.0 39 35.67301018520102 38.0 35.0 40.0 29.0 40.0 40 35.419908325109255 38.0 35.0 40.0 28.0 40.0 41 35.10887206129802 38.0 34.0 40.0 27.0 40.0 42 34.81530398200708 37.0 34.0 40.0 26.0 40.0 43 34.52505610571725 37.0 33.0 40.0 25.0 40.0 44 34.12736791874994 36.0 33.0 40.0 23.0 40.0 45 33.911364713192235 36.0 33.0 40.0 23.0 40.0 46 33.68873143850342 36.0 33.0 39.0 23.0 40.0 47 33.44448226277492 35.0 33.0 39.0 22.0 40.0 48 33.1915873280485 35.0 33.0 39.0 20.0 40.0 49 32.82868571946221 35.0 32.0 39.0 20.0 40.0 50 32.60264766737227 35.0 32.0 39.0 18.0 40.0 51 32.31632686238937 35.0 32.0 38.0 17.0 40.0 52 31.123893602397704 35.0 30.0 37.0 12.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 3.0 13 3.0 14 11.0 15 60.0 16 189.0 17 509.0 18 1253.0 19 2641.0 20 5015.0 21 8402.0 22 13473.0 23 20596.0 24 29731.0 25 41674.0 26 56433.0 27 75588.0 28 99504.0 29 128360.0 30 158703.0 31 185979.0 32 211632.0 33 257578.0 34 341014.0 35 459143.0 36 619518.0 37 988576.0 38 1362310.0 39 252860.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.917225343226406 16.624545483078638 33.50256984012995 13.955659333565004 2 32.87589233039873 17.980912121748045 30.74888375887726 18.39431178897597 3 19.280557529480287 23.95744667255179 36.04401176599053 20.717984031977394 4 17.69407334555089 26.011796437312796 38.69447949061403 17.599650726522288 5 0.0 100.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 0.0 100.0 0.0 0.0 8 100.0 0.0 0.0 0.0 9 0.0 0.0 100.0 0.0 10 0.0 0.0 100.0 0.0 11 99.44118874769559 0.27597566437419924 0.26033879752869843 0.022496790401519785 12 99.39608240102586 0.44091453869645286 0.07562830791622023 0.08737475236145821 13 98.06281397071358 1.154797651989124 0.27398346739628693 0.5084049099010123 14 52.65228137564585 32.986910326139565 5.702156402874102 8.658651895340496 15 28.91610012782011 31.360732557140814 19.50832578585123 20.214841529187847 16 30.699999755673957 20.01231403264083 25.90587169988342 23.381814511801792 17 21.817751941029464 20.492377121384376 27.623145494843875 30.066725442742285 18 21.49729014225226 26.765391929985928 29.097953882143507 22.639364045618304 19 24.34985309426719 24.48272887383172 26.458687566942984 24.7087304649581 20 24.285576550262846 23.82652550134295 27.34940635349205 24.538491594902155 21 29.992487913848382 25.457289082253116 18.5807701495219 25.969452854376602 22 29.005993317870626 27.679753959914365 19.605943437768936 23.708309284446074 23 24.051512199669258 27.697740115648916 22.98779177933073 25.2629559053511 24 24.180084081989055 31.31323933295983 19.721058593332266 24.78561799171885 25 27.53092181021542 24.750660573049824 24.14770148394242 23.57071613279233 26 25.653445307333033 26.660576056912184 18.795156856380828 28.890821779373958 27 26.918114502085132 31.480114021326656 17.945898320145677 23.65587315644253 28 25.647825808310433 31.65926139484987 17.65274465541476 25.040168141424935 29 26.469531884454835 29.45621104056771 17.685221225016956 26.3890358499605 30 28.742158778475023 29.27313565602201 18.25615480798886 23.728550757514107 31 26.049516619715344 29.238478946330776 18.31077107608144 26.40123335787244 32 25.65049460048839 33.48896275888459 17.743953447243147 23.116589193383877 33 26.833220598790508 33.28378526447073 18.145211989492477 21.737782147246286 34 25.44405788723 35.0095916766762 16.459850934800844 23.086499501292952 35 25.374969999580888 34.63385580891749 18.114802794112645 21.876371397388983 36 26.917475495507315 32.63603933198252 18.47971313867063 21.966772033839533 37 25.732588151427265 33.441789037992514 18.863248645540985 21.962374165039236 38 24.702227633313218 35.02626223063289 19.332260679350448 20.93924945670345 39 26.6241714762875 33.67513920476383 19.699031660708556 20.001657658240113 40 26.17459276016824 34.58743386046991 18.137844619536423 21.10012875982543 41 26.41910674774031 35.69611027298925 16.75666949019867 21.128113489071765 42 26.744661804828972 35.824343857709025 16.756443958465326 20.67455037899668 43 27.322135808067983 33.635971860405625 17.37340480935145 21.668487522174935 44 26.57229917761733 32.857605465686376 18.582781140810926 21.987314215885366 45 25.5110032234123 31.92694876802351 20.881870424877352 21.680177583686838 46 25.783539528852934 30.77557168065684 20.70802304708783 22.732865743402396 47 27.472828594567055 29.98183153944766 19.952021882592312 22.59331798339297 48 27.040390290182287 30.739016745543257 19.618949101058703 22.601643863215756 49 26.815591534967098 30.167575716171317 20.306952447949627 22.709880300911955 50 25.85255223925759 32.20038720039754 19.74626176453397 22.200798795810897 51 24.736997108871122 32.04005293229782 20.571745497211957 22.651204461619106 52 26.262832050840867 31.53965439893068 19.789281942670208 22.408231607558246 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 5.5 2 11.0 3 15.0 4 19.0 5 183.5 6 348.0 7 1796.0 8 3244.0 9 5768.5 10 8293.0 11 10964.0 12 13635.0 13 15701.5 14 15662.0 15 13556.0 16 16434.5 17 19313.0 18 25185.5 19 31058.0 20 45078.5 21 59099.0 22 81831.5 23 104564.0 24 128585.5 25 152607.0 26 157433.5 27 162260.0 28 148149.0 29 134038.0 30 120418.5 31 106799.0 32 102304.0 33 97809.0 34 98769.0 35 99729.0 36 99399.5 37 99070.0 38 108442.5 39 139282.5 40 160750.0 41 180574.0 42 200398.0 43 207316.5 44 214235.0 45 227701.0 46 241167.0 47 249626.0 48 258085.0 49 282953.5 50 307822.0 51 315352.0 52 322882.0 53 336452.5 54 350023.0 55 384109.5 56 418196.0 57 400646.0 58 383096.0 59 369671.0 60 356246.0 61 307526.0 62 258806.0 63 231516.5 64 183198.5 65 162170.0 66 135277.0 67 108384.0 68 88780.5 69 69177.0 70 50929.5 71 32682.0 72 25171.5 73 17661.0 74 13352.5 75 9044.0 76 6656.5 77 4269.0 78 2253.0 79 237.0 80 158.0 81 79.0 82 70.0 83 61.0 84 41.5 85 22.0 86 13.5 87 5.0 88 2.5 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 5320759.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.773178620683426 #Duplication Level Percentage of deduplicated Percentage of total 1 81.47641005738376 12.851419692071614 2 7.500693261106757 2.3661954917278667 3 2.6614790941056907 1.2593995543963132 4 1.474638011303648 0.9303891501256729 5 0.9566081089789836 0.7544375286459851 6 0.7157362866317243 0.6773661776608114 7 0.5311884912512826 0.5864971667630472 8 0.42981274941052444 0.5423610615919396 9 0.3319728363374183 0.4712640160288504 >10 2.8916646991051937 9.489021327576017 >50 0.29344737845776037 3.1515729585236136 >100 0.37864321702724757 15.65385766142892 >500 0.25555721341975607 28.61562119639533 >1k 0.10202477900091039 22.522364386686437 >5k 1.2381647937003687E-4 0.12823263037759405 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAACAAAGTTGGGACCTGCTGGGATTTATTCAAGCCAAACTTTAGTGATGAG 6566 0.12340344676389214 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.00875814897836944 0.0 0.0 0.0 0.0 12 0.020617359290281707 0.0 0.0 0.0 0.0 13 0.048808825958852865 0.0 0.0 0.0 0.0 14 0.21158635450318272 0.0 0.0 0.0 0.0 15 0.4006383299826209 0.0 0.0 0.0 0.0 16 0.4897045703441934 0.0 0.0 0.0 0.0 17 0.5502598407482843 0.0 0.0 0.0 0.0 18 0.6490803285771823 0.0 0.0 0.0 0.0 19 0.7297831004937454 0.0 0.0 0.0 0.0 20 0.803851480587638 0.0 0.0 0.0 0.0 21 0.8840843947263914 0.0 0.0 0.0 0.0 22 0.949507391708589 0.0 0.0 0.0 0.0 23 1.0114910297572208 0.0 0.0 0.0 0.0 24 1.0965916704740808 0.0 0.0 0.0 0.0 25 1.1803015321686248 0.0 0.0 0.0 0.0 26 1.2781635101307915 0.0 0.0 0.0 0.0 27 1.4064346834727903 0.0 0.0 0.0 0.0 28 1.5194636705026483 0.0 0.0 0.0 0.0 29 1.634560031754868 0.0 0.0 0.0 0.0 30 1.7654436143414878 0.0 0.0 0.0 0.0 31 1.892756277816755 0.0 0.0 0.0 0.0 32 2.057018556938963 0.0 0.0 0.0 0.0 33 2.1734869029023867 0.0 0.0 0.0 0.0 34 2.2722885964201724 0.0 0.0 0.0 0.0 35 2.3631215020263086 0.0 0.0 0.0 0.0 36 2.4585778081660905 0.0 0.0 0.0 0.0 37 2.552962838572467 0.0 0.0 0.0 0.0 38 2.647460634845517 0.0 0.0 0.0 0.0 39 2.7444392801854023 0.0 0.0 0.0 0.0 40 2.84846579219243 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTTACG 35 1.0205076E-7 46.000004 46 CCAATAC 70 0.0 46.000004 26 CTGTTAG 35 1.0205076E-7 46.000004 36 TAAGACG 35 1.0205076E-7 46.000004 17 TACACTA 35 1.0205076E-7 46.000004 34 ACGACTA 105 0.0 46.000004 26 AACGTTC 40 5.6188583E-9 46.0 29 TGATAGC 80 0.0 46.0 23 CTACTTA 20 6.3135306E-4 46.0 32 ATAGGGT 75 0.0 46.0 19 TTTACGT 25 3.41884E-5 46.0 21 TAGACCC 80 0.0 46.0 33 GTTTACG 60 0.0 46.0 18 ATTACCC 55 1.8189894E-12 46.0 33 TTCACGG 80 0.0 46.0 21 CGCGCAT 20 6.3135306E-4 46.0 45 CGATTTA 100 0.0 46.0 34 TACGGTC 160 0.0 46.0 27 TAACGTA 50 1.6370905E-11 46.0 27 CGATTAG 55 1.8189894E-12 46.0 41 >>END_MODULE