SRR1528097_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1528097_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1831661
Sequences flagged as poor quality	0
Sequence length	52
%GC	38

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCCGCGTATTGGGGGGACTGGAGAGATGGCTCAGCGGTTAAGATCACTGACT	3193	0.17432265031575167	No Hit
GGTTCGTATTGGGGAGGATAACTGATGCATCACCATCATCACCATGCTCCTG	2935	0.160237074436809	No Hit
CCGCCGTATTGGGGCCGGGCGCGGTGGCGCACGCCTGTAGTCCCAGCTACTC	2693	0.14702502264338216	No Hit
TTCTCGTATTGGGGAAAAACATGGCCGATCTCCAGCTCAGATCTTGCTTAGA	2286	0.12480475371807337	No Hit
CCAGCGTATTGGGAACCAGTGGTATCAACGCAGAATAAGTCGTATTGGGATC	2058	0.11235703549947289	No Hit
TATGCGTATTGGGTTCCATTATTACAGGTTTCCATTATTATAAGAAATTACT	1889	0.103130437346212	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACGAG	160	0.0	46.000004	26
TCTGCAC	40	5.6152203E-9	46.000004	46
CTTGTAC	80	0.0	46.000004	34
CTATGTG	140	0.0	46.000004	31
CTATGGA	145	0.0	46.000004	42
CTATGCG	20	6.312439E-4	46.000004	37
GATACTA	40	5.6152203E-9	46.000004	13
ACTATGA	20	6.312439E-4	46.000004	34
CCTTAGC	35	1.0200165E-7	46.000004	19
GATACGC	20	6.312439E-4	46.000004	20
TCTGACA	145	0.0	46.000004	15
ACAGTCT	40	5.6152203E-9	46.000004	41
TGCCCCT	35	1.0200165E-7	46.000004	43
ACCGGCA	70	0.0	46.000004	32
ATTAGTG	160	0.0	46.000004	15
CTCAATA	20	6.312439E-4	46.000004	31
ATTAGAG	35	1.0200165E-7	46.000004	35
CAAGTAT	35	1.0200165E-7	46.000004	30
AGATAGT	70	0.0	46.000004	33
CCTAGTC	70	0.0	46.000004	19