SRR1528096_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1528096_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1666892
Sequences flagged as poor quality	0
Sequence length	59
%GC	38

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCCGCGTATTGGGGGGACTGGAGAGATGGCTCAGCGGTTAAGATCACTGACTGCTCTTC	2479	0.14871989307045685	No Hit
CCGCCGTATTGGGGCCGGGCGCGGTGGCGCACGCCTGTAGTCCCAGCTACTCGGGAGGC	2231	0.1338419045745015	No Hit
TATGCGTATTGGGTTCCATTATTACAGGTTTCCATTATTATAAGAAATTACTAAATAGA	1830	0.10978515704676728	No Hit
TTCTCGTATTGGGGAAAAACATGGCCGATCTCCAGCTCAGATCTTGCTTAGATGGCAGG	1812	0.10870530304302858	No Hit
CCAGCGTATTGGGAACCAGTGGTATCAACGCAGAATAAGTCGTATTGGGATCCCTGCTT	1776	0.10654559503555121	No Hit
GTCACGTATTGGGGACAAAATGAATACTTTCCATCCCATTTTTCAAAATTAGTGAATGT	1752	0.10510578969723293	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GAAATAT	25	1.4790219E-5	53.000004	16
GATACTA	50	3.6379788E-12	53.000004	13
ATCTCCG	75	0.0	53.000004	35
TCCGAGC	100	0.0	53.000004	18
TTAGAAT	25	1.4790219E-5	53.000004	9
TTCACAG	135	0.0	53.000004	16
ATTGTCC	25	1.4790219E-5	53.000004	30
ATTAAGG	50	3.6379788E-12	53.000004	26
TTCAATT	50	3.6379788E-12	53.000004	51
CTAAGTG	50	3.6379788E-12	53.000004	22
CAATTAG	25	1.4790219E-5	53.000004	39
CTAAGCA	50	3.6379788E-12	53.000004	43
TCGATCA	100	0.0	53.000004	27
CATTAAG	50	3.6379788E-12	53.000004	25
GACCAAG	100	0.0	53.000004	52
GTTACAT	135	0.0	53.000004	24
ATATCCG	25	1.4790219E-5	53.000004	29
CTTATGT	100	0.0	53.000004	39
CTCATTT	100	0.0	53.000004	32
ACTCATT	50	3.6379788E-12	53.000004	16