##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528095_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8763479 Sequences flagged as poor quality 0 Sequence length 52 %GC 56 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.29454135737645 31.0 31.0 34.0 30.0 34.0 2 31.82702714298739 31.0 31.0 34.0 30.0 34.0 3 31.98174765980497 31.0 31.0 34.0 30.0 34.0 4 35.53142695954426 37.0 35.0 37.0 33.0 37.0 5 35.46336198215344 37.0 35.0 37.0 33.0 37.0 6 35.45724340755538 37.0 35.0 37.0 32.0 37.0 7 35.835686603459656 37.0 35.0 37.0 35.0 37.0 8 35.656648347077684 37.0 35.0 37.0 33.0 37.0 9 37.32681472734744 39.0 37.0 39.0 34.0 39.0 10 37.23239640330056 39.0 37.0 39.0 33.0 39.0 11 37.41019770801071 39.0 37.0 39.0 35.0 39.0 12 37.370216554407214 39.0 37.0 39.0 35.0 39.0 13 37.26593605119611 39.0 37.0 39.0 35.0 39.0 14 37.68581370480833 40.0 38.0 40.0 33.0 40.0 15 35.90121400416433 38.0 35.0 40.0 31.0 40.0 16 35.80119276830583 38.0 35.0 40.0 29.0 40.0 17 35.73407273526872 38.0 34.0 40.0 27.0 40.0 18 36.163016651263725 38.0 35.0 40.0 30.0 40.0 19 36.354194721069106 38.0 35.0 40.0 31.0 40.0 20 36.455852749804045 38.0 35.0 40.0 31.0 40.0 21 36.37695794101863 38.0 35.0 40.0 31.0 40.0 22 36.507388104655696 38.0 35.0 40.0 31.0 40.0 23 36.47157709854728 38.0 35.0 40.0 31.0 40.0 24 36.42032040015158 38.0 35.0 40.0 31.0 40.0 25 36.4956554354726 39.0 35.0 40.0 31.0 40.0 26 36.31309768643252 38.0 35.0 40.0 31.0 40.0 27 36.091766637427895 38.0 35.0 40.0 30.0 40.0 28 35.98193194734648 38.0 35.0 40.0 30.0 40.0 29 36.010241138251146 38.0 35.0 40.0 30.0 40.0 30 35.950444908922584 38.0 35.0 40.0 30.0 40.0 31 35.932197019014936 38.0 35.0 40.0 30.0 40.0 32 35.89706508111676 38.0 35.0 40.0 30.0 40.0 33 35.778588161162936 38.0 35.0 40.0 30.0 40.0 34 35.635162930155936 38.0 35.0 40.0 30.0 40.0 35 35.56236569974094 38.0 34.0 40.0 30.0 40.0 36 35.42491229795838 37.0 34.0 40.0 29.0 40.0 37 35.256195285000395 37.0 34.0 40.0 28.0 40.0 38 34.98640539904301 37.0 34.0 40.0 27.0 40.0 39 34.71400365083319 36.0 34.0 40.0 26.0 40.0 40 34.479024369203145 36.0 33.0 40.0 26.0 40.0 41 34.275970422248975 35.0 33.0 40.0 25.0 40.0 42 34.080745900115694 35.0 33.0 40.0 24.0 40.0 43 33.847581879297024 35.0 33.0 39.0 23.0 40.0 44 33.60628170615802 35.0 33.0 39.0 23.0 40.0 45 33.45644806132359 35.0 33.0 39.0 23.0 40.0 46 33.31451607289753 35.0 33.0 39.0 23.0 40.0 47 32.998285840589105 35.0 33.0 38.0 22.0 40.0 48 32.81078553391866 35.0 33.0 38.0 22.0 40.0 49 32.71316893667458 35.0 32.0 38.0 22.0 40.0 50 32.55668028644788 35.0 32.0 37.0 20.0 40.0 51 32.37179469477818 35.0 32.0 37.0 20.0 40.0 52 31.56385814355235 35.0 31.0 36.0 18.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 6.0 13 13.0 14 43.0 15 143.0 16 505.0 17 1347.0 18 3007.0 19 6172.0 20 11795.0 21 19676.0 22 30383.0 23 44786.0 24 63666.0 25 87235.0 26 115474.0 27 149748.0 28 190451.0 29 237222.0 30 280542.0 31 319302.0 32 373924.0 33 484556.0 34 791711.0 35 1076998.0 36 863290.0 37 1398484.0 38 1825128.0 39 387871.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.97368248386286 21.343658152201883 34.627081322383496 17.055578041551765 2 25.703707397484493 21.228019146277408 34.315150410014105 18.753123046223994 3 27.574859253956106 20.688039533158005 34.23804632840451 17.49905488448138 4 27.713023560620158 20.441345269384453 38.242814297837654 13.602816872157735 5 100.0 0.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 0.0 0.0 0.0 100.0 8 0.0 0.0 100.0 0.0 9 0.0 100.0 0.0 0.0 10 100.0 0.0 0.0 0.0 11 98.85874091784781 0.9700485389421256 0.12869318223961054 0.04251736097045477 12 98.92840503183724 0.6577068308145657 0.27064593867344233 0.14324219867475008 13 95.37734956630808 2.4551664926680377 1.2115051567990291 0.9559787842248495 14 56.72187951839675 26.577059179351032 7.443881590861347 9.257179711390876 15 33.149894008988895 33.029142878073884 15.50793925563124 18.313023857305986 16 30.76261151535823 22.104680116195862 25.346600362709832 21.786108005736075 17 21.56199609766852 22.39077653977376 28.85001493128471 27.197212431273016 18 20.002934907472252 24.847654681434165 29.958353297817 25.19105711327659 19 26.06867660663077 23.342099638739363 26.19982315242611 24.389400602203757 20 26.447510172615235 23.16566286060593 25.73886466778776 24.647962298991075 21 29.154825383845846 23.556147050731795 22.394496523583843 24.894531041838523 22 30.371237267756335 24.070098188173898 20.875020069084435 24.683644474985332 23 26.50230576235762 23.745889047032577 22.04538859510019 27.706416595509616 24 26.709517989373854 26.30891224820645 20.48841561667461 26.493154145745084 25 27.898223981594523 22.932559089831788 24.09990370262769 25.069313225946 26 28.706898253536068 25.04932116571512 20.11156756352129 26.132213017227517 27 30.209611958903537 26.435528629668653 20.02759406395565 23.327265347472164 28 28.816067226269386 26.645114343287634 19.466002029559267 25.072816400883713 29 29.242187948416376 25.486613250285643 18.70129431473505 26.56990448656293 30 29.37201081899095 24.761547326124706 20.533774314972398 25.332667539911945 31 27.25182544512288 25.73464260027325 20.582841586086985 26.430690368516885 32 27.534361638796646 28.24608811181039 19.255971287202264 24.9635789621907 33 27.975989900814508 27.31431204433764 19.913484131131025 24.796213923716827 34 26.239225312230452 28.742740183436283 20.244984896979844 24.773049607353425 35 29.280357720946213 28.157732790824287 17.931212022074796 24.630697466154707 36 28.469424072334743 27.83429959722617 20.48051920932315 23.21575712111594 37 29.16447908416281 28.25889124627331 19.70300836003601 22.873621309527874 38 27.629426623832842 28.725612282519304 21.568751405691735 22.07620968795612 39 28.835614257762245 28.578695744007604 21.71804143080619 20.867648567423966 40 29.443397992966037 27.669034181516267 20.562176277252448 22.32539154826525 41 28.951424428585952 28.89497424481761 18.45203257747294 23.701568749123496 42 29.672199819272688 26.50389189042388 19.71214856565526 24.11175972464817 43 28.804176971269058 26.74354557134216 18.678951589887987 25.773325867500795 44 28.41825717845618 27.254415740598 21.285975581159036 23.041351499786785 45 26.765682898310132 28.790803287142015 20.02309813260236 24.420415681945492 46 28.220949693609125 26.893953873798292 19.93537041624679 24.949726016345792 47 28.863160395546107 25.387485951640894 21.943454192107954 23.805899460705046 48 27.586954906835516 24.87158353434749 22.655089377175436 24.886372181641562 49 28.380635133603903 26.2280653608002 21.423021610481406 23.968277895114486 50 28.330095844355878 27.099602794734828 20.88397769881117 23.686323662098125 51 26.45369493097433 28.202509528464663 21.522103265153028 23.821692275407973 52 28.50836979240779 26.65970900369591 20.640375814217162 24.191545389679145 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 2.0 8 4.0 9 56.0 10 108.0 11 1386.5 12 2665.0 13 5102.0 14 13218.0 15 18897.0 16 21082.0 17 23267.0 18 24711.0 19 26155.0 20 24649.0 21 23143.0 22 25564.0 23 27985.0 24 33038.0 25 38091.0 26 45801.5 27 53512.0 28 63852.5 29 74193.0 30 85087.0 31 95981.0 32 112499.0 33 129017.0 34 148372.0 35 167727.0 36 172818.0 37 177909.0 38 171042.5 39 158680.5 40 153185.0 41 173625.5 42 194066.0 43 205478.0 44 216890.0 45 210306.5 46 203723.0 47 217147.5 48 230572.0 49 279313.0 50 328054.0 51 346926.5 52 365799.0 53 406160.0 54 446521.0 55 490517.5 56 534514.0 57 577955.0 58 621396.0 59 651840.5 60 682285.0 61 700793.0 62 719301.0 63 734463.0 64 703801.5 65 657978.0 66 583522.0 67 509066.0 68 437405.5 69 365745.0 70 317203.0 71 268661.0 72 250390.5 73 232120.0 74 187061.5 75 142003.0 76 104960.5 77 67918.0 78 44790.0 79 21662.0 80 15817.0 81 9972.0 82 10370.5 83 10769.0 84 5968.0 85 1167.0 86 620.5 87 74.0 88 50.0 89 21.0 90 16.0 91 9.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 8763479.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 11.735003727260457 #Duplication Level Percentage of deduplicated Percentage of total 1 82.65881501009872 9.70001502234441 2 6.931809080138093 1.6268961078415682 3 2.556186319524549 0.899905679615783 4 1.4805938381137873 0.6949909683529665 5 0.9705412659254367 0.5694652686547541 6 0.7276458638624967 0.5123356154731233 7 0.5194765528825831 0.42672414990110685 8 0.384625525448271 0.36108655797879774 9 0.30437112551111983 0.32146166631091067 >10 2.2497508454740287 5.345185051242894 >50 0.26200478205706323 2.1372830483797616 >100 0.4155981581274814 13.304987535636123 >500 0.329155616175866 28.26372069254007 >1k 0.20932523416940366 35.7649698343242 >5k 1.007824911744842E-4 0.07097280140360572 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.14012699750863783 0.0 0.0 0.0 0.0 10 0.14012699750863783 0.0 0.0 0.0 0.0 11 0.14380133734559072 0.0 0.0 0.0 0.0 12 0.15913771231722013 0.0 0.0 0.0 0.0 13 0.19815189834995897 0.0 0.0 0.0 0.0 14 0.37883356598446805 0.0 0.0 0.0 0.0 15 0.5066937457144588 0.0 0.0 0.0 0.0 16 0.5957907812639249 0.0 0.0 0.0 0.0 17 0.6747320327919997 0.0 0.0 0.0 0.0 18 0.7811509561442437 0.0 0.0 0.0 0.0 19 0.8365056845574685 0.0 0.0 0.0 0.0 20 0.8844889113102228 0.0 0.0 0.0 0.0 21 0.9335675934180935 0.0 0.0 0.0 0.0 22 0.9880208533620038 0.0 0.0 0.0 0.0 23 1.0389252943950684 0.0 0.0 0.0 1.1410993282462364E-5 24 1.0976690878131847 0.0 0.0 0.0 2.282198656492473E-5 25 1.1607490586786366 0.0 0.0 0.0 2.282198656492473E-5 26 1.2451561759890108 0.0 0.0 0.0 2.282198656492473E-5 27 1.309548411081946 0.0 0.0 0.0 2.282198656492473E-5 28 1.375127389476257 0.0 0.0 0.0 3.423297984738709E-5 29 1.4377166876305632 0.0 0.0 0.0 3.423297984738709E-5 30 1.5136112039522203 0.0 0.0 0.0 3.423297984738709E-5 31 1.587714194328531 0.0 0.0 0.0 3.423297984738709E-5 32 1.6749512379729556 0.0 0.0 2.282198656492473E-5 3.423297984738709E-5 33 1.7268484354215945 0.0 0.0 2.282198656492473E-5 3.423297984738709E-5 34 1.786459464329178 0.0 0.0 2.282198656492473E-5 3.423297984738709E-5 35 1.832240369378417 0.0 0.0 2.282198656492473E-5 3.423297984738709E-5 36 1.8836012501427801 0.0 0.0 2.282198656492473E-5 3.423297984738709E-5 37 1.933524345753553 0.0 0.0 2.282198656492473E-5 3.423297984738709E-5 38 1.981576038466002 0.0 0.0 2.282198656492473E-5 3.423297984738709E-5 39 2.0337356887601374 0.0 0.0 2.282198656492473E-5 3.423297984738709E-5 40 2.0910759300045108 0.0 0.0 2.282198656492473E-5 3.423297984738709E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACTT 75 0.0 46.0 45 CGTTAAC 90 0.0 46.0 25 TACGATA 55 1.8189894E-12 46.0 46 TACTAAC 55 1.8189894E-12 46.0 33 CGGTAAT 45 3.110472E-10 46.0 35 CGATAAC 65 0.0 46.0 21 TTATACG 95 0.0 45.999996 36 ACTACGT 70 0.0 45.999996 30 CGTACCA 95 0.0 45.999996 33 TATACGA 95 0.0 45.999996 37 GCGTATT 355 0.0 45.35211 26 CAATTGA 340 0.0 45.32353 15 CGCACTA 215 0.0 44.930233 35 ATATGCG 210 0.0 44.904762 16 CCGATAG 205 0.0 44.878048 25 TAACGCC 1670 0.0 44.76048 1 TACTCGA 160 0.0 44.5625 16 TAAACTA 155 0.0 44.516132 21 CGCGATT 145 0.0 44.413795 17 GTACCGA 135 0.0 44.2963 14 >>END_MODULE