##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528086_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 10829815 Sequences flagged as poor quality 0 Sequence length 52 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.93852027943229 31.0 31.0 33.0 30.0 34.0 2 31.64897027326875 31.0 31.0 34.0 30.0 34.0 3 31.98246396637431 33.0 31.0 34.0 30.0 34.0 4 35.63526357560124 37.0 35.0 37.0 33.0 37.0 5 35.55822200102218 37.0 35.0 37.0 33.0 37.0 6 35.22163425691021 37.0 35.0 37.0 32.0 37.0 7 35.500558412124306 37.0 35.0 37.0 33.0 37.0 8 34.9302301101173 37.0 35.0 37.0 32.0 37.0 9 36.995593091848754 39.0 37.0 39.0 33.0 39.0 10 37.21956386143253 39.0 37.0 39.0 33.0 39.0 11 37.46719791612322 39.0 37.0 39.0 35.0 39.0 12 37.36217987103196 39.0 37.0 39.0 35.0 39.0 13 37.29397750561759 39.0 37.0 39.0 35.0 39.0 14 37.81416109139445 40.0 38.0 40.0 33.0 40.0 15 37.17597392014545 39.0 37.0 40.0 31.0 40.0 16 36.87247880042272 39.0 36.0 40.0 31.0 40.0 17 36.77389715336781 39.0 36.0 40.0 31.0 40.0 18 36.9095208920928 39.0 36.0 40.0 31.0 40.0 19 36.95765310857111 39.0 36.0 40.0 31.0 40.0 20 36.94576749464326 39.0 36.0 40.0 31.0 40.0 21 36.899194584579696 39.0 36.0 40.0 31.0 40.0 22 36.9097956890307 39.0 36.0 40.0 31.0 40.0 23 36.80396082481557 39.0 35.0 40.0 31.0 40.0 24 36.849117274856496 39.0 35.0 40.0 31.0 40.0 25 36.97329492701399 39.0 36.0 40.0 31.0 40.0 26 36.85228214886404 39.0 35.0 40.0 31.0 40.0 27 36.662199769802164 39.0 35.0 40.0 31.0 40.0 28 36.56902791044907 39.0 35.0 40.0 30.0 40.0 29 36.591738732379085 39.0 35.0 40.0 31.0 40.0 30 36.52009143277147 39.0 35.0 40.0 30.0 40.0 31 36.52017721447689 39.0 35.0 40.0 31.0 40.0 32 36.452050104272324 39.0 35.0 40.0 31.0 40.0 33 36.30993761204601 39.0 35.0 40.0 30.0 40.0 34 36.11125720984153 38.0 35.0 40.0 30.0 40.0 35 36.04034944271901 38.0 35.0 40.0 30.0 40.0 36 35.83296953826081 38.0 35.0 40.0 30.0 40.0 37 35.65871393001635 38.0 35.0 40.0 29.0 40.0 38 35.39664380231795 38.0 34.0 40.0 28.0 40.0 39 35.17680856044171 37.0 34.0 40.0 28.0 40.0 40 34.85847172827975 37.0 34.0 40.0 26.0 40.0 41 34.764351099257006 37.0 33.0 40.0 27.0 40.0 42 34.53927772542744 36.0 33.0 40.0 26.0 40.0 43 34.30180090795641 36.0 33.0 39.0 26.0 40.0 44 34.024815105336515 35.0 33.0 39.0 24.0 40.0 45 33.86988438860682 35.0 33.0 39.0 24.0 40.0 46 33.624945116791004 35.0 33.0 39.0 23.0 40.0 47 33.270761596573905 35.0 33.0 39.0 23.0 40.0 48 33.01526978992716 35.0 33.0 38.0 22.0 40.0 49 32.87899091535728 35.0 32.0 38.0 22.0 40.0 50 32.67188100627758 35.0 32.0 37.0 21.0 40.0 51 32.42178753746024 35.0 32.0 37.0 20.0 40.0 52 31.565608923144115 34.0 31.0 36.0 18.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 4.0 13 15.0 14 35.0 15 97.0 16 301.0 17 807.0 18 2072.0 19 4430.0 20 9064.0 21 16569.0 22 27092.0 23 41820.0 24 61717.0 25 87947.0 26 119610.0 27 156715.0 28 203818.0 29 257588.0 30 318615.0 31 385115.0 32 460312.0 33 570162.0 34 775878.0 35 1124845.0 36 1359717.0 37 2018058.0 38 2388319.0 39 439090.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.294129216427056 20.231241253890303 35.37627374059483 15.098355789087812 2 19.295112612726996 23.57863915496248 35.85427821250871 21.271970019801817 3 21.640305028294573 23.652841715209355 36.77904931894035 17.92780393755572 4 24.397646681868526 22.147811389206556 35.52396786094684 17.93057406797808 5 100.0 0.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 100.0 0.0 0.0 0.0 8 0.0 100.0 0.0 0.0 9 0.0 0.0 100.0 0.0 10 0.0 0.0 0.0 100.0 11 99.53769293381282 0.324585415355664 0.09385201870946087 0.043869632122063025 12 99.16644928837658 0.6147104082572048 0.144914756161578 0.0739255472046383 13 94.09270610809142 4.242584014593047 0.6222266954698672 1.0424831818456732 14 50.52791760524072 32.18128841536074 6.785776118982642 10.505017860415897 15 33.25860137038352 28.129704893389224 18.86335085133033 19.748342884896925 16 31.206377948284437 18.725213680935454 26.5237771836361 23.54463118714401 17 24.602562462978362 17.902060192163948 28.007043518287244 29.488333826570447 18 23.4376764515368 22.749612989695578 28.249014410680147 25.563696148087477 19 27.718155850307692 19.372473121655357 29.597633939268587 23.311737088768368 20 27.72549669592694 20.333366728794537 26.368243594188822 25.572892981089705 21 34.68789633063907 20.6419684916132 19.47918777929263 25.190947398455098 22 32.78938744567659 21.709502886245055 21.302616896041158 24.198492772037195 23 28.547856080644035 24.461461253031562 22.133619087676013 24.85706357864839 24 28.199124361773492 25.790283582868224 21.472019605136374 24.53857245022191 25 30.781606149320183 21.641967106547987 23.360399046521106 24.216027697610716 26 29.27615106998596 21.75625345400637 19.612569559129124 29.355025916878542 27 29.02015408388786 25.78035728218811 18.752093179800394 26.44739545412364 28 31.619367459185593 24.982116499681666 18.59265370645759 24.805862334675155 29 29.512563233997994 22.102085769701514 19.938022948683795 28.447328047616693 30 30.97366852527028 22.01790150616608 18.981496913843866 28.02693305471977 31 27.49072814263217 22.16506930173784 20.770530244514795 29.573672311115196 32 28.5277172324735 26.272895705051287 19.278316388599436 25.92107067387578 33 30.665546918391495 24.55614431086773 18.406223929032954 26.37208484170782 34 28.58833691988275 26.149033940099624 19.97568748865978 25.286941651357846 35 33.842369421822994 24.120652107168958 18.624297829648985 23.412680641359064 36 30.203313722348906 23.580799856691918 21.18602210656415 25.029864314395027 37 30.33530120320615 24.617668907548282 23.094845110465876 21.952184778779692 38 28.170056459874893 26.43793084184725 24.308753196615086 21.08325950166277 39 30.831071444895414 26.760383256777704 21.33057674577082 21.07796855255607 40 30.25272361531568 28.562907122605512 18.554453607933283 22.629915654145524 41 31.667909377953364 29.70053505069108 16.706259525208882 21.92529604614668 42 30.576228679806626 30.183996679537 17.46506288426903 21.774711756387344 43 31.292639809636636 28.393208932931913 17.546883303177385 22.767267954254066 44 28.272689792023225 28.874546795120693 19.238066393562587 23.614697019293494 45 26.74138016208033 26.931466511662478 21.486276543043438 24.840876783213748 46 26.602984446179367 26.59037111898957 18.851171511240036 27.955472923591028 47 29.323040144268393 24.893435391093938 21.212938540501383 24.570585924136285 48 29.840916026728063 24.62386476592629 20.614294888693852 24.920924318651796 49 29.0610227413857 25.395078309278595 20.461605299813524 25.082293649522175 50 27.583379771491938 26.983378755777455 20.466831612543704 24.9664098601869 51 26.671397433843513 26.459334716243998 21.839348132909013 25.029919717003473 52 29.266603353796906 25.481838794106825 21.137138538377616 24.114419313718656 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 3.0 6 6.0 7 245.0 8 484.0 9 828.0 10 1172.0 11 2600.5 12 4029.0 13 10112.0 14 20892.5 15 25590.0 16 24994.0 17 24398.0 18 24279.0 19 24160.0 20 26111.5 21 28063.0 22 32700.5 23 37338.0 24 47367.0 25 57396.0 26 70173.0 27 82950.0 28 94328.0 29 105706.0 30 107201.0 31 108696.0 32 105765.5 33 102835.0 34 103441.0 35 104047.0 36 109347.5 37 114648.0 38 125014.5 39 156433.0 40 177485.0 41 182497.5 42 187510.0 43 216212.0 44 244914.0 45 290070.5 46 335227.0 47 367681.0 48 400135.0 49 453312.5 50 506490.0 51 548709.5 52 590929.0 53 694587.0 54 798245.0 55 859228.5 56 920212.0 57 946549.0 58 972886.0 59 976994.0 60 981102.0 61 965230.5 62 949359.0 63 917893.5 64 772266.0 65 658104.0 66 548550.5 67 438997.0 68 369522.0 69 300047.0 70 254312.5 71 208578.0 72 180961.5 73 153345.0 74 119183.5 75 85022.0 76 62424.0 77 39826.0 78 27300.0 79 14774.0 80 9733.5 81 4693.0 82 2575.5 83 458.0 84 861.5 85 1265.0 86 793.5 87 322.0 88 344.0 89 183.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1.0829815E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.519163590189702 #Duplication Level Percentage of deduplicated Percentage of total 1 80.2656585162754 10.048589096395549 2 8.100095030900976 2.0281282957586404 3 2.9847112706388006 1.1209826599983035 4 1.6693303322790374 0.83594478063468 5 1.0808402176081155 0.6765607749546116 6 0.7831061847694323 0.5882300661370707 7 0.5979213915347992 0.5239833000288614 8 0.4565250182217407 0.4572249108905846 9 0.35235296046368353 0.397004791817925 >10 2.423279657655631 6.123723302222276 >50 0.2743875786060104 2.3947835344765616 >100 0.4975784246723053 17.18986008033348 >500 0.37467850337054365 33.398932587464536 >1k 0.13945811888538834 24.135563567432914 >5k 7.679411832895832E-5 0.08048825145403275 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 1.3634581938841983 0.0 0.0 0.0 0.0 7 1.3634581938841983 0.0 0.0 0.0 0.0 8 1.3634581938841983 0.0 0.0 0.0 0.0 9 1.3634581938841983 0.0 0.0 0.0 0.0 10 1.3634581938841983 0.0 0.0 0.0 0.0 11 1.3761730925228177 0.0 0.0 0.0 0.0 12 1.4018245002338452 0.0 0.0 0.0 0.0 13 1.4336902338590272 0.0 0.0 0.0 0.0 14 1.538595072953693 0.0 0.0 0.0 0.0 15 1.642124080605255 0.0 0.0 0.0 0.0 16 1.681672309268441 0.0 0.0 9.233768074523895E-6 0.0 17 1.7339539041063952 0.0 0.0 9.233768074523895E-6 0.0 18 1.8358023659683937 0.0 0.0 9.233768074523895E-6 0.0 19 1.8964312871457176 0.0 0.0 9.233768074523895E-6 0.0 20 1.9661185348041494 0.0 0.0 9.233768074523895E-6 0.0 21 2.030302456690165 0.0 0.0 9.233768074523895E-6 0.0 22 2.089592481496683 0.0 0.0 9.233768074523895E-6 0.0 23 2.1674331463649192 0.0 0.0 9.233768074523895E-6 6.463637652166726E-5 24 2.2457447334049565 0.0 0.0 9.233768074523895E-6 6.463637652166726E-5 25 2.3268356846354252 0.0 0.0 9.233768074523895E-6 6.463637652166726E-5 26 2.3889604762408223 0.0 0.0 9.233768074523895E-6 6.463637652166726E-5 27 2.4476687736586453 0.0 0.0 9.233768074523895E-6 6.463637652166726E-5 28 2.5222129833242763 0.0 0.0 9.233768074523895E-6 6.463637652166726E-5 29 2.5937931534379857 0.0 0.0 9.233768074523895E-6 6.463637652166726E-5 30 2.681061495510311 0.0 0.0 9.233768074523895E-6 6.463637652166726E-5 31 2.7661691358531977 0.0 0.0 9.233768074523895E-6 6.463637652166726E-5 32 2.8898554592114456 0.0 0.0 9.233768074523895E-6 6.463637652166726E-5 33 2.956052342537707 0.0 0.0 9.233768074523895E-6 6.463637652166726E-5 34 3.0442809964897832 0.0 0.0 9.233768074523895E-6 6.463637652166726E-5 35 3.0984924488553127 0.0 0.0 9.233768074523895E-6 6.463637652166726E-5 36 3.168521345932502 0.0 0.0 9.233768074523895E-6 6.463637652166726E-5 37 3.2257430066903265 0.0 0.0 9.233768074523895E-6 6.463637652166726E-5 38 3.282059758176848 0.0 0.0 9.233768074523895E-6 6.463637652166726E-5 39 3.34146058820026 0.0 0.0 9.233768074523895E-6 6.463637652166726E-5 40 3.4088855626804335 0.0 0.0 9.233768074523895E-6 6.463637652166726E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTCTAT 75 0.0 46.000004 20 CACGATT 70 0.0 46.000004 18 CATACGT 70 0.0 46.000004 18 TTTACGC 40 5.6188583E-9 46.0 15 GCTATAC 50 1.6370905E-11 46.0 34 CGATTAT 20 6.3138205E-4 46.0 26 TACGCAC 30 1.8628671E-6 46.0 14 CGCTATA 25 3.4190765E-5 46.0 35 CGAATAT 20 6.3138205E-4 46.0 24 CATAACG 65 0.0 46.0 36 TATAGGT 45 3.110472E-10 46.0 17 TGTCGAT 25 3.4190765E-5 46.0 33 ACCTTAT 55 1.8189894E-12 46.0 44 ACCGAAT 105 0.0 43.809525 41 CGTAACA 105 0.0 43.809525 17 TATAGCG 100 0.0 43.699997 25 CGACTAA 95 0.0 43.578945 31 CTTACGT 190 0.0 43.578945 38 CCCACGA 180 0.0 43.444447 34 TACGGGT 80 0.0 43.125 20 >>END_MODULE