##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528083_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1434279 Sequences flagged as poor quality 0 Sequence length 52 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.937971621978708 31.0 31.0 34.0 28.0 34.0 2 31.689994066705292 31.0 31.0 34.0 30.0 34.0 3 31.92217832095429 31.0 31.0 34.0 30.0 34.0 4 35.55991616693823 37.0 35.0 37.0 33.0 37.0 5 35.47554764449595 37.0 35.0 37.0 33.0 37.0 6 35.42002357979166 37.0 35.0 37.0 33.0 37.0 7 35.634591317309955 37.0 35.0 37.0 33.0 37.0 8 35.730558001616146 37.0 35.0 37.0 33.0 37.0 9 37.388364467443225 39.0 37.0 39.0 34.0 39.0 10 37.22614568016404 39.0 37.0 39.0 33.0 39.0 11 37.61758486319607 39.0 37.0 39.0 35.0 39.0 12 37.570743906868884 39.0 37.0 39.0 35.0 39.0 13 37.321155089072626 39.0 37.0 39.0 35.0 39.0 14 37.43813163268792 40.0 37.0 40.0 32.0 40.0 15 36.336303466759254 38.0 35.0 40.0 31.0 40.0 16 36.70061961445437 39.0 36.0 40.0 31.0 40.0 17 36.41757356832248 39.0 35.0 40.0 30.0 40.0 18 36.65462159036004 39.0 35.0 40.0 31.0 40.0 19 36.79038666814476 39.0 36.0 40.0 31.0 40.0 20 36.823416504041404 39.0 35.0 40.0 31.0 40.0 21 36.910333345185975 39.0 36.0 40.0 31.0 40.0 22 37.040185347481206 39.0 36.0 40.0 31.0 40.0 23 37.09231397796384 39.0 36.0 40.0 32.0 40.0 24 37.106307071357804 39.0 36.0 40.0 32.0 40.0 25 37.23060436637502 40.0 36.0 40.0 32.0 40.0 26 36.99609211318021 39.0 36.0 40.0 31.0 40.0 27 36.673046178602625 39.0 35.0 40.0 31.0 40.0 28 36.27835727916256 38.0 35.0 40.0 30.0 40.0 29 36.13579296636149 38.0 35.0 40.0 30.0 40.0 30 35.96690392873353 38.0 35.0 40.0 30.0 40.0 31 35.83117162002651 38.0 35.0 40.0 30.0 40.0 32 35.78095754033908 38.0 35.0 40.0 30.0 40.0 33 35.61136431614769 38.0 35.0 40.0 29.0 40.0 34 35.45262672046373 38.0 35.0 40.0 28.0 40.0 35 35.341161656832455 38.0 35.0 40.0 27.0 40.0 36 35.07997188831462 38.0 34.0 40.0 26.0 40.0 37 34.867738424671906 37.0 34.0 40.0 25.0 40.0 38 34.46328991779145 37.0 33.0 40.0 23.0 40.0 39 33.900366665063075 36.0 33.0 40.0 21.0 40.0 40 33.37486430464366 35.0 33.0 40.0 19.0 40.0 41 32.73704139850057 35.0 33.0 39.0 15.0 40.0 42 32.11474406304492 35.0 32.0 39.0 12.0 40.0 43 31.533427596722813 35.0 31.0 38.0 10.0 40.0 44 31.0573988742776 35.0 30.0 38.0 10.0 40.0 45 30.684336868907653 35.0 29.0 38.0 9.0 40.0 46 30.311793591065616 35.0 27.0 37.0 9.0 40.0 47 29.735041090331798 35.0 25.0 37.0 8.0 40.0 48 29.339978483963023 35.0 23.0 36.0 8.0 40.0 49 29.076567390305513 35.0 23.0 36.0 8.0 40.0 50 28.68454115273249 34.0 23.0 35.0 8.0 39.0 51 28.306517072340878 34.0 20.0 35.0 8.0 39.0 52 27.474377021486056 33.0 18.0 35.0 8.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 7.0 14 8.0 15 27.0 16 53.0 17 192.0 18 570.0 19 1355.0 20 2565.0 21 4366.0 22 6887.0 23 10434.0 24 14930.0 25 20256.0 26 26903.0 27 35012.0 28 45389.0 29 57476.0 30 65544.0 31 65494.0 32 65426.0 33 75774.0 34 102268.0 35 136659.0 36 170129.0 37 255038.0 38 230707.0 39 40809.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.8379074085307 21.955142618695525 37.79759725966845 6.4093527131053305 2 27.350396959029588 20.381738838817274 33.08672859325139 19.181135608901755 3 26.78760547982645 22.514517747244433 32.781000070418656 17.91687670251046 4 20.672407530194615 24.419028654815417 32.87073156617367 22.037832248816304 5 0.0 100.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 0.0 100.0 0.0 0.0 8 0.0 0.0 0.0 100.0 9 0.0 100.0 0.0 0.0 10 100.0 0.0 0.0 0.0 11 98.53654693403445 1.2473165960039854 0.1717936328984807 0.04434283706308187 12 98.02569792906401 1.2949363408374521 0.44844831444928074 0.23091741564925652 13 91.35014875069635 5.459537509787148 1.9761148284259895 1.21419891109052 14 38.07613442015117 41.60027442359541 9.988363491343037 10.335227664910382 15 23.759603257106882 49.56113838381515 14.931265116480127 11.747993242597849 16 39.48722668323248 33.71373352046568 16.44707898532991 10.351960810971923 17 21.133057096980433 34.094412593365725 23.5195523325657 21.25297797708814 18 18.465166121793597 42.332279842345876 26.635682457876047 12.566871577984479 19 28.914667230015915 35.85111404405977 25.950529848097894 9.28368887782642 20 18.416709719657053 42.86153530798401 28.026137174148126 10.695617798210808 21 25.96963352318482 35.880397049667465 21.544622768652403 16.605346658495314 22 20.778732729127317 48.19180926444576 19.37447316735447 11.654984839072453 23 17.85064133268353 39.01179617075897 28.70724594029474 14.430316556262762 24 15.04484134537283 53.39498103228173 16.66495849133955 14.895219131005893 25 19.892852088052603 38.94681578688665 21.59586802846587 19.564464096594875 26 20.33174856495842 46.51026752814481 12.335256947915992 20.822726958980784 27 26.015789117737903 47.1554000302591 11.007272643606997 15.821538208395996 28 27.359321303595745 45.0943644855708 13.218557895639552 14.327756315193907 29 30.325968657422997 40.21490937258372 12.390336887035227 17.06878508295806 30 32.870940730499434 42.74084749201515 10.431791861973856 13.956419915511557 31 21.129292139116586 51.323068942653414 11.36829026988473 16.179348648345265 32 20.02295229868108 57.71248132336875 10.688715375460422 11.575851002489753 33 20.62708859294461 58.870833359478866 10.307896859676534 10.194181187899984 34 17.205927159220767 61.31540655618607 11.126217423527779 10.352448861065385 35 18.425912949990902 58.62973661330885 12.528106456275243 10.416243980425008 36 15.185330050847847 58.6906034321077 14.275534955193514 11.848531561850937 37 15.608818089088663 61.07166039522297 13.100449773021847 10.219071742666525 38 16.405315841617984 59.039001477397356 14.182387108784274 10.373295572200387 39 16.45356307942876 59.13786648204429 13.190948204638008 11.217622233888944 40 16.4902365578803 60.2369552925198 12.187098883829437 11.085709265770467 41 17.773459696474674 59.119669185702364 12.112008890878274 10.994862226944688 42 17.892753083605072 54.85201972559035 14.996803271887826 12.258423918916751 43 16.863315993610726 58.02309034713608 11.692355531943226 13.421238127309959 44 17.915621716555844 53.43848721204173 13.686737378153065 14.95915369324936 45 19.136165278861363 55.421434741776174 12.85056812516951 12.591831854192941 46 23.65564858719956 53.09022860963593 11.562115878430905 11.692006924733612 47 23.312619092937986 51.510619621426514 13.025220337186838 12.151540948448664 48 21.671027742858957 52.487138137001246 12.039986641371728 13.801847478768078 49 21.10293743406966 53.99737429049718 12.455386992349467 12.444301283083696 50 18.249936030577036 56.022363849711255 12.535496929119091 13.192203190592625 51 18.47304464473091 56.14779272373088 13.884676551772705 11.494486079765514 52 21.378127965340077 53.14356551270708 12.540168265727939 12.938138256224905 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 5.5 4 11.0 5 147.5 6 284.0 7 649.5 8 1015.0 9 4238.5 10 7462.0 11 11751.5 12 16041.0 13 16322.0 14 15390.0 15 14177.0 16 12227.0 17 10277.0 18 11445.5 19 12614.0 20 16040.0 21 19466.0 22 28010.5 23 36555.0 24 50247.0 25 63939.0 26 83722.0 27 103505.0 28 108967.5 29 114430.0 30 107336.0 31 100242.0 32 90571.5 33 80901.0 34 72435.0 35 63969.0 36 57738.5 37 51508.0 38 49368.0 39 50577.5 40 53927.0 41 59106.0 42 64285.0 43 65100.0 44 65915.0 45 68872.5 46 71830.0 47 75021.5 48 78213.0 49 73186.5 50 68160.0 51 66792.0 52 65424.0 53 58342.5 54 51261.0 55 44666.5 56 38072.0 57 31281.5 58 24491.0 59 25667.5 60 26844.0 61 25558.0 62 24272.0 63 19452.5 64 13624.0 65 12615.0 66 9211.0 67 5807.0 68 3836.5 69 1866.0 70 1705.0 71 1544.0 72 1167.0 73 790.0 74 508.5 75 227.0 76 2009.0 77 3791.0 78 1928.5 79 66.0 80 39.5 81 13.0 82 8.0 83 3.0 84 2.0 85 1.0 86 1.5 87 2.0 88 1.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1434279.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.63953096115672 #Duplication Level Percentage of deduplicated Percentage of total 1 85.17128091280152 31.206357840059685 2 6.212129086357524 4.552189919885975 3 1.9875504286341157 2.1846874640040004 4 1.0139081075962673 1.4859647000016503 5 0.6733369375094731 1.2335374784584394 6 0.4602665189616483 1.0118369623127486 7 0.377477529636773 0.9681419743987248 8 0.30585326518392114 0.8965056143421725 9 0.2629212437109385 0.866997994436349 >10 3.0972635364627874 23.98404806973878 >50 0.25121944482554465 6.233886555680878 >100 0.14431358647447284 11.603328809472572 >500 0.030259299944387343 7.831378063770431 >1k 0.012220101900617966 5.941138553437631 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGCTATACAGGGGGCCGGGCGCGTGGCTCGCCGTGATCGTATAGTGGTTAGT 3311 0.23084769420733345 No Hit AGACATACAGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAA 2970 0.20707268251156158 No Hit GCCGATACAGGGAACGGATGCCTGTAAAAAACACGGCGGCTTCTACCTTGGC 2344 0.16342705986771056 No Hit GCGTATACAGGGCTGGTAGGAATGCAAAACAGGGCTGGGCATGGTCGTTCAT 1968 0.13721179770463068 No Hit GGGGATACAGGGGCTGTCTTCTTTATCATGCAACTCGTAGGACAGGTTCCGG 1947 0.13574764742424592 No Hit TCTAATACAGGGGGCTTTTTCGCCGCCGGACGCCGCCGAGGTCGCACGCGTG 1681 0.11720174387270538 No Hit ATAAATACAGGGGGCTCTTTCCCGTCTTGCAAGATGGCGGGTGAAAAAGCGC 1678 0.11699257954693612 No Hit ACATATACAGGGGTAGCCCATTTCTCTCAGATCTGTAGATGTCTTCAAGTTT 1658 0.11559815070847443 No Hit ACGAATACAGGGGGAGGCCAAGATGGGAAGAATACTTTGAGGCCAGGAATTC 1641 0.114412886195782 No Hit TCAAATACAGGGGCGTCAGACGCTAAGCCAGCAAAATACGCCGACGCTGGAA 1603 0.11176347140270478 No Hit GAGTATACAGGGACTGCCGAGCGTGATCAGATCGGCATTTCTTTAATCTTTT 1569 0.1093929423773199 No Hit CAAAATACAGGGGGGGACAGTGGGTGTTGCTTGTAATCCCAGCACTTTGAGA 1520 0.10597659172308874 No Hit GGTGATACAGGGGAAGTATTATTATTCATACTTGTAAATACTTTACAAATAT 1503 0.1047913272103963 No Hit TTACATACAGGGGACTCTTCCAGCAAAGAAACAGACCAGATGCCGGGCGCGG 1448 0.10095664790462663 No Hit TTAGATACAGGGGACCTCCCACTGGGGTCTAACCTGGGAACCCTCCGAGAAC 1436 0.10011999060154962 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.2993838716177257 0.0 0.0 0.0 0.0 10 0.2993838716177257 0.0 0.0 0.0 0.0 11 0.3768443935942728 0.0 0.0 0.0 0.0 12 0.49606805928274766 0.0 0.0 0.0 0.0 13 0.5626520363192935 0.0 0.0 0.0 0.0 14 0.9762396298070319 0.0 0.0 0.0 0.0 15 1.300583777633222 0.0 0.0 0.0 0.0 16 1.4838814484490117 0.0 0.0 0.0 0.0 17 1.6228362822017195 0.0 0.0 0.0 0.0 18 1.8310942292259735 0.0 0.0 0.0 0.0 19 1.9729076420975278 0.0 0.0 0.0 0.0 20 2.129571722098699 0.0 0.0 0.0 0.0 21 2.2803792009783312 0.0 0.0 0.0 0.0 22 2.4672326653321983 0.0 0.0 0.0 0.0 23 2.6335880257606785 0.0 0.0 0.0 0.0 24 2.84428622325224 0.0 0.0 0.0 0.0 25 3.0520561201830327 0.0 0.0 0.0 0.0 26 3.2898062371407515 0.0 0.0 0.0 0.0 27 3.5002255488646212 0.0 0.0 0.0 0.0 28 3.7200572552481073 0.0 0.0 0.0 0.0 29 3.968474752820058 0.0 0.0 0.0 0.0 30 4.256215143636629 0.0 0.0 0.0 0.0 31 4.548905756829738 0.0 0.0 0.0 0.0 32 4.795719661237458 0.0 0.0 0.0 0.0 33 5.013599167247098 0.0 0.0 0.0 0.0 34 5.223809314645198 0.0 0.0 0.0 0.0 35 5.421051273845604 0.0 0.0 0.0 0.0 36 5.64018576580986 0.0 0.0 0.0 0.0 37 5.860993572380269 0.0 0.0 0.0 0.0 38 6.077130042341832 0.0 0.0 0.0 0.0 39 6.325965868565321 0.0 0.0 0.0 0.0 40 6.595857570249581 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTCGTG 140 0.0 46.000004 21 CTGCTCG 75 0.0 46.000004 40 ATTTAAG 35 1.0197982E-7 46.000004 19 CTGCTAT 110 0.0 46.000004 26 TGTTTAG 35 1.0197982E-7 46.000004 32 CGGCGTT 55 1.8189894E-12 46.000004 45 ACTATGT 105 0.0 46.000004 18 CGGCGAA 75 0.0 46.000004 26 TTGGCGG 105 0.0 46.000004 36 TCTGACA 55 1.8189894E-12 46.000004 46 TTGGCAC 75 0.0 46.000004 29 CCCCTAG 55 1.8189894E-12 46.000004 40 CTCACAC 75 0.0 46.000004 31 TACCCGG 55 1.8189894E-12 46.000004 25 GCCCAGC 75 0.0 46.000004 39 TCACCGG 110 0.0 46.000004 30 TTGGACT 75 0.0 46.000004 45 CTCAACT 155 0.0 46.000004 38 CTCAAAC 35 1.0197982E-7 46.000004 17 CAAGTAG 35 1.0197982E-7 46.000004 46 >>END_MODULE