##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528081_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1368581 Sequences flagged as poor quality 0 Sequence length 59 %GC 37 >>END_MODULE >>Per base sequence quality warn #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.50998150639239 31.0 31.0 33.0 27.0 34.0 2 31.33760734658745 31.0 31.0 34.0 28.0 34.0 3 31.58896404377965 31.0 31.0 34.0 30.0 34.0 4 35.301782649328025 37.0 35.0 37.0 33.0 37.0 5 35.07248529681473 37.0 35.0 37.0 32.0 37.0 6 35.042159726022795 37.0 35.0 37.0 32.0 37.0 7 35.18690380766648 37.0 35.0 37.0 32.0 37.0 8 35.4174170180647 37.0 35.0 37.0 33.0 37.0 9 36.95348759043126 39.0 37.0 39.0 33.0 39.0 10 36.8341435399147 39.0 37.0 39.0 33.0 39.0 11 37.18192565876627 39.0 37.0 39.0 34.0 39.0 12 37.17659166684325 39.0 37.0 39.0 34.0 39.0 13 36.80934997636238 39.0 37.0 39.0 32.0 39.0 14 36.609608053889396 39.0 36.0 40.0 31.0 40.0 15 35.499654021208826 38.0 34.0 40.0 27.0 40.0 16 35.74207080180128 38.0 34.0 40.0 28.0 40.0 17 35.59552923794792 38.0 34.0 40.0 27.0 40.0 18 35.91532616629925 38.0 34.0 40.0 29.0 40.0 19 36.16342985910224 38.0 35.0 40.0 30.0 40.0 20 36.12538315233077 38.0 35.0 40.0 30.0 40.0 21 36.19462421296218 38.0 35.0 40.0 30.0 40.0 22 36.241200922707534 38.0 35.0 40.0 30.0 40.0 23 36.27602166039131 38.0 35.0 40.0 30.0 40.0 24 36.322975402990394 38.0 35.0 40.0 30.0 40.0 25 36.388565967231756 39.0 35.0 40.0 30.0 40.0 26 35.972191634985435 38.0 35.0 40.0 29.0 40.0 27 35.6034936916412 38.0 34.0 40.0 27.0 40.0 28 35.197248098578015 37.0 34.0 40.0 27.0 40.0 29 34.972270548838544 37.0 34.0 40.0 27.0 40.0 30 34.68528936175498 37.0 33.0 40.0 26.0 40.0 31 34.58376668973192 37.0 33.0 40.0 25.0 40.0 32 34.55840246211222 37.0 33.0 40.0 25.0 40.0 33 34.25166139234726 37.0 33.0 40.0 24.0 40.0 34 34.08343313256577 36.0 33.0 40.0 23.0 40.0 35 34.00849200741498 36.0 33.0 40.0 23.0 40.0 36 33.5876919232402 36.0 33.0 40.0 21.0 40.0 37 33.52383600239956 36.0 33.0 40.0 21.0 40.0 38 33.284477864298864 35.0 32.0 40.0 21.0 40.0 39 32.63741203480101 35.0 31.0 39.0 18.0 40.0 40 32.14363051949428 35.0 31.0 39.0 15.0 40.0 41 31.464611886326058 35.0 30.0 38.0 12.0 40.0 42 30.93537393840774 35.0 29.0 38.0 10.0 40.0 43 30.428181452175647 35.0 28.0 37.0 10.0 40.0 44 29.948816328737575 34.0 26.0 37.0 9.0 40.0 45 29.608661818335925 34.0 25.0 36.0 9.0 40.0 46 29.207968691659463 34.0 23.0 36.0 8.0 40.0 47 28.58426063199767 33.0 23.0 35.0 8.0 39.0 48 28.171256944236404 33.0 22.0 35.0 8.0 39.0 49 27.814757036667906 33.0 20.0 35.0 8.0 39.0 50 27.226585054154633 33.0 20.0 35.0 8.0 38.0 51 26.84953831742513 33.0 18.0 35.0 8.0 38.0 52 26.16031349258831 32.0 15.0 35.0 8.0 38.0 53 25.82245625213268 32.0 13.0 35.0 8.0 38.0 54 25.407214479815224 31.0 12.0 35.0 8.0 37.0 55 24.92214344638717 31.0 10.0 35.0 8.0 37.0 56 24.2165147696775 30.0 10.0 35.0 8.0 36.0 57 23.413958691520634 27.0 9.0 35.0 8.0 36.0 58 22.697938229450795 26.0 9.0 34.0 8.0 35.0 59 21.73314769092951 24.0 8.0 34.0 8.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 3.0 14 24.0 15 90.0 16 349.0 17 967.0 18 2431.0 19 4880.0 20 8427.0 21 13158.0 22 18860.0 23 26256.0 24 34116.0 25 44241.0 26 54841.0 27 63409.0 28 63645.0 29 60387.0 30 64261.0 31 75181.0 32 88754.0 33 104617.0 34 125593.0 35 133277.0 36 144175.0 37 142047.0 38 89557.0 39 5033.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.30918593784365 22.482556750385985 36.94373953752098 6.264517774249387 2 26.99401789152414 21.07365219888337 32.638185098287934 19.294144811304555 3 26.699333104872856 22.835477037895455 32.56935468196621 17.895835175265475 4 20.69464649881885 24.654295215263108 32.624009832081555 22.027048453836493 5 0.0 100.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 0.0 100.0 0.0 0.0 8 0.0 0.0 0.0 100.0 9 0.0 100.0 0.0 0.0 10 100.0 0.0 0.0 0.0 11 98.55412284694877 1.199928977532203 0.18778574304334197 0.05816243247568102 12 98.11454345778584 1.2255759797922081 0.4138593185204237 0.24602124390153013 13 91.39042555756656 5.546474779351752 1.8795380032310838 1.1835616598506045 14 37.87499607257444 41.89602223032469 10.043249175605974 10.185732521494892 15 23.512017191529036 50.030067639401686 14.861086044596556 11.59682912447272 16 39.68943014699167 33.32524709900254 16.539685995933016 10.445636758072778 17 21.05056259001111 33.79120417425055 23.662172717581203 21.49606051815713 18 18.42894209403755 42.29424491498859 26.62378039736048 12.653032593613384 19 29.292822273581177 35.67943731499999 25.849036337637305 9.17870407378153 20 18.271845071647203 42.810765310931544 28.231430949282505 10.68595866813875 21 26.119827763208754 35.60300778689752 21.920587820523593 16.356576629370128 22 20.81915502261101 48.188305989926796 19.544477089774006 11.44806189768819 23 17.67896821598429 38.87362165629948 29.295891145646475 14.15151898206975 24 14.745345726705253 53.89867315124205 16.759841032427016 14.596140089625678 25 19.677242340789476 38.88648169162074 21.860525610102727 19.575750357487063 26 20.04821051877821 46.75543500896184 12.34687607090848 20.849478401351472 27 25.848524858959752 47.342247188876655 11.061384017460421 15.747843934703171 28 27.25202235015684 45.5152453526682 13.103791445299912 14.128940851875043 29 30.34113435741107 40.30276614975657 12.253860019976896 17.10223947285546 30 33.0043307630312 42.93476235604615 10.280136871694111 13.780770009228538 31 20.84187928957073 51.89060786318092 11.179608660356969 16.087904186891386 32 19.688421803313066 58.63138535461182 10.360000613774414 11.3201922283007 33 20.514606004321266 59.61254759491765 9.9912975556434 9.88154884511768 34 16.83502839802686 62.30241396015289 11.000591123214482 9.861966518605767 35 18.218359015651977 59.3631652054208 12.327220676014061 10.091255102913163 36 14.842599743822252 59.42030468054138 14.27580830071439 11.46128727492198 37 15.291897227858636 62.16731052089719 12.680506305436069 9.860285945808103 38 15.97552501459541 60.22281472561727 13.707555489956386 10.094104769830942 39 15.986850613884016 60.38765699655336 12.915348086814008 10.710144302748613 40 15.841590669459826 61.656927869084846 11.8341552308559 10.66732623059943 41 16.98467244540148 60.60744669113484 11.735001435793716 10.672879427669974 42 16.898524822425564 56.554708855376475 14.746295615677846 11.80047070652011 43 16.045816798567277 59.79368411515284 11.129191476427044 13.031307609852833 44 17.15031846854516 54.92214198501952 13.16129626233303 14.766243284102293 45 18.402929749865006 57.16366075519096 12.34183435251549 12.091575142428544 46 23.094431385500748 54.40525624716403 10.994745652613911 11.505566714721306 47 22.74911020977202 52.75157261426251 12.551248336780944 11.948068839184527 48 21.160968915979396 53.68246380740344 11.546265803777782 13.610301472839387 49 20.51109872196092 55.160271843610275 12.1330779836926 12.1955514507362 50 17.46465865009086 57.38198908212229 12.191532689698308 12.961819578088546 51 17.79237034563537 57.357072763687356 13.570698409520517 11.27985848115676 52 19.33513617389106 55.186722598077864 12.599035058940611 12.879106169090468 53 16.97086252110763 55.3140077204053 13.71508153335462 14.000048225132456 54 17.97357993425307 53.782713628203226 14.166498000483713 14.07720843705999 55 18.095165722744948 51.79167327326625 14.492529123230558 15.620631880758246 56 19.236201583976396 50.395336483554864 15.133119632670628 15.235342299798113 57 20.131800748366373 47.509573784818 15.80118385393338 16.557441612882247 58 20.642475673708756 46.24169121155416 16.007236692603506 17.10859642213358 59 22.671438519166934 42.68092279521636 17.814217792005003 16.833420893611702 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 5.0 4 101.0 5 192.0 6 502.0 7 812.0 8 3149.5 9 8727.5 10 11968.0 11 12023.0 12 12078.0 13 10836.5 14 7513.5 15 5432.0 16 5304.5 17 5177.0 18 5889.0 19 9297.0 20 11993.0 21 17459.5 22 22926.0 23 35192.0 24 47458.0 25 59513.5 26 77581.0 27 83593.0 28 87695.0 29 91797.0 30 90779.0 31 85172.5 32 80584.0 33 76356.5 34 72129.0 35 68410.5 36 61353.5 37 58015.0 38 54874.5 39 51734.0 40 51875.0 41 52016.0 42 50887.0 43 53899.0 44 58040.0 45 55889.0 46 53738.0 47 53448.0 48 51809.0 49 50460.0 50 49316.5 51 48173.0 52 42169.0 53 37443.5 54 38722.0 55 32669.0 56 26616.0 57 21987.0 58 18972.5 59 20587.0 60 20922.5 61 21258.0 62 17799.5 63 14341.0 64 10277.0 65 6690.0 66 7167.0 67 5427.5 68 3688.0 69 2646.0 70 1022.5 71 441.0 72 1141.5 73 1842.0 74 1535.0 75 1337.0 76 1446.0 77 1169.0 78 892.0 79 473.0 80 54.0 81 31.5 82 5.5 83 2.0 84 2.0 85 2.0 86 1.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 1368581.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.868039874271034 #Duplication Level Percentage of deduplicated Percentage of total 1 90.8899219455177 49.869518614760466 2 4.294129486557314 4.712209357874193 3 1.3185492869430153 2.17038644556543 4 0.7060765981625231 1.5496415576908384 5 0.419347169623873 1.150437861204268 6 0.29315924003982113 0.9651043723209539 7 0.23368797609633787 0.8975400833414094 8 0.17049267893040768 0.7483679284659918 9 0.15608827672454348 0.7707832012105652 >10 1.3406328954526425 14.712202285180703 >50 0.08261510123069667 3.0182988331232945 >100 0.0718516004950262 9.009335657131217 >500 0.019334104888258305 7.440065862986778 >1k 0.004113639337927299 2.98610793914395 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AGACATACAGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAA 2739 0.20013429968704813 No Hit GGCTATACAGGGGGCCGGGCGCGTGGCTCGCCGTGATCGTATAGTGGTTAGTACTCTGC 2536 0.18530141803809932 No Hit GCCGATACAGGGAACGGATGCCTGTAAAAAACACGGCGGCTTCTACCTTGGCAGTATCG 1878 0.1372224223484032 No Hit GCGTATACAGGGCTGGTAGGAATGCAAAACAGGGCTGGGCATGGTCGTTCATGCCTGTA 1646 0.12027055760674742 No Hit GGGGATACAGGGGCTGTCTTCTTTATCATGCAACTCGTAGGACAGGTTCCGGCAGCGCT 1508 0.11018712082076253 No Hit ACATATACAGGGGTAGCCCATTTCTCTCAGATCTGTAGATGTCTTCAAGTTTTTGGCCT 1494 0.1091641634656626 No Hit ACGAATACAGGGGGAGGCCAAGATGGGAAGAATACTTTGAGGCCAGGAATTCAAGACCA 1427 0.10426858183768443 No Hit GGTGATACAGGGGAAGTATTATTATTCATACTTGTAAATACTTTACAAATATAGTAAAT 1388 0.10141891491990608 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.26165787775805743 0.0 0.0 0.0 0.0 10 0.26165787775805743 0.0 0.0 0.0 0.0 11 0.332388072024966 0.0 0.0 0.0 0.0 12 0.4321264141472079 0.0 0.0 0.0 0.0 13 0.49123873559548176 0.0 0.0 0.0 0.0 14 0.8570190584262093 0.0 0.0 0.0 0.0 15 1.1360672112209653 0.0 0.0 0.0 0.0 16 1.2950640115564953 0.0 0.0 0.0 0.0 17 1.4127041073929858 0.0 0.0 0.0 0.0 18 1.5922331232130214 0.0 0.0 0.0 0.0 19 1.7149149374425043 0.0 0.0 0.0 0.0 20 1.8542563428836145 0.0 0.0 0.0 0.0 21 1.9905288762594249 0.0 0.0 0.0 0.0 22 2.153763642780369 0.0 0.0 0.0 0.0 23 2.2927397063089434 0.0 0.0 0.0 0.0 24 2.470149739036272 0.0 0.0 0.0 0.0 25 2.6330922320271872 0.0 0.0 0.0 0.0 26 2.829938454501414 0.0 0.0 0.0 0.0 27 3.013413162976835 0.0 0.0 0.0 0.0 28 3.208213470740862 0.0 0.0 0.0 0.0 29 3.423180652076859 0.0 0.0 0.0 0.0 30 3.6692018959783894 0.0 0.0 0.0 0.0 31 3.9196803112128547 0.0 0.0 0.0 0.0 32 4.137643296231644 0.0 0.0 0.0 0.0 33 4.3274749539851864 0.0 0.0 0.0 0.0 34 4.509488294810464 0.0 0.0 0.0 0.0 35 4.681052856937222 0.0 0.0 0.0 0.0 36 4.858974368342101 0.0 0.0 0.0 0.0 37 5.0510711459533635 0.0 0.0 0.0 0.0 38 5.244921564744797 0.0 0.0 0.0 0.0 39 5.463103754911109 0.0 0.0 0.0 0.0 40 5.701598955414403 0.0 0.0 0.0 0.0 41 5.933225727962028 0.0 0.0 0.0 0.0 42 6.176689578475808 0.0 0.0 0.0 0.0 43 6.422126275317281 0.0 0.0 0.0 0.0 44 6.663617279503369 0.0 0.0 0.0 0.0 45 6.92593277270399 0.0 0.0 0.0 0.0 46 7.15412533127378 0.0 0.0 0.0 0.0 47 7.369165580992283 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTGAGC 65 0.0 53.000004 50 AACGTAT 50 3.6379788E-12 53.000004 33 CTATGAA 50 3.6379788E-12 53.000004 33 TAATAAG 25 1.4788815E-5 53.000004 32 GTCGCGG 35 3.342757E-8 53.000004 43 CATATTC 70 0.0 53.000004 38 GCGACGA 70 0.0 53.000004 44 CATATGT 65 0.0 53.000004 41 TACTTTG 175 0.0 53.000004 33 CAAGTTA 35 3.342757E-8 53.000004 41 CATATAA 70 0.0 53.000004 44 TTCAGGC 200 0.0 53.000004 20 CATGCTT 25 1.4788815E-5 53.000004 42 TTTACCG 70 0.0 53.000004 18 CACGGCG 175 0.0 53.000004 32 CGAAACT 70 0.0 53.000004 48 CGACGGT 50 3.6379788E-12 53.000004 34 CGACGAA 70 0.0 53.000004 45 CCGATAA 50 3.6379788E-12 53.000004 30 CCTAGAC 70 0.0 53.000004 29 >>END_MODULE