SRR1528078_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1528078_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2725611
Sequences flagged as poor quality	0
Sequence length	59
%GC	53

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCATCTCTGGGGGCCGCCCATCCCTCTTTGTGTGCTTGGGACGCCGCGGATCTGCGG	3528	0.12943886710172506	No Hit
AATTATCTCTGGGGCTCTTCGCCATCTTTACCCCGGCAGGCCGACATCTATCACCATGA	3220	0.11813864854522528	No Hit
TATAATCTCTGGGTCTGACCCTGATCTCAGCCTATTCCTAAGCTTGGCCCTCCCCAGCA	3002	0.1101404419045858	No Hit
GGGCATCTCTGGGATCTTTACCCCGGCAGGCCGACATCTATCACCATGAAGGTCGAGCT	2809	0.10305946079612975	No Hit
ACGGATCTCTGGGGCTCTCTTTCCCGCCTTGCAAGATGGCGGGTGAAAAAGCGCCTGAT	2782	0.10206885722137166	No Hit
AGAAATCTCTGGGGGCGGACACCAGGACTTCAAGATGGCGTCACTCGTGCCGCTGAAGG	2748	0.1008214304976022	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCGGTA	65	0.0	53.000004	31
ATAATCC	155	0.0	53.000004	37
ATTCCCG	65	0.0	53.000004	16
CTTATGA	155	0.0	53.000004	33
GTTCGAC	65	0.0	53.000004	15
TAACATA	65	0.0	53.000004	53
ACAACTA	25	1.4792724E-5	53.0	19
ACAACGG	15	0.006697247	53.0	36
CTTAACG	25	1.4792724E-5	53.0	25
CTAGACG	70	0.0	53.0	45
ACACGTG	30	7.0140595E-7	53.0	45
CATATAG	25	1.4792724E-5	53.0	48
CTCCGTA	45	7.6397555E-11	53.0	47
ACGTTCA	30	7.0140595E-7	53.0	39
ACGTTAA	85	0.0	53.0	52
TTAGCAC	25	1.4792724E-5	53.0	46
TAGACGG	15	0.006697247	53.0	52
TAGACGA	70	0.0	53.0	46
GACACGT	25	1.4792724E-5	53.0	44
TAGGTTA	50	3.6379788E-12	53.0	33