##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1528070_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5764015 Sequences flagged as poor quality 0 Sequence length 52 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.054798434771595 31.0 31.0 33.0 30.0 33.0 2 31.70000043372545 31.0 31.0 34.0 30.0 34.0 3 31.950400371962946 31.0 31.0 34.0 30.0 34.0 4 35.72936069736113 37.0 35.0 37.0 35.0 37.0 5 35.366404841069986 37.0 35.0 37.0 33.0 37.0 6 35.566550919801564 37.0 35.0 37.0 33.0 37.0 7 35.84212515061116 37.0 35.0 37.0 35.0 37.0 8 35.92177553320038 37.0 35.0 37.0 35.0 37.0 9 37.120767208274096 39.0 37.0 39.0 33.0 39.0 10 36.13539347139103 37.0 35.0 39.0 32.0 39.0 11 37.19093513809385 39.0 37.0 39.0 34.0 39.0 12 37.44171987755063 39.0 37.0 39.0 35.0 39.0 13 37.38583053652706 39.0 37.0 39.0 35.0 39.0 14 37.99528557784808 40.0 38.0 40.0 33.0 40.0 15 37.324204916191235 39.0 37.0 40.0 32.0 40.0 16 37.031016574384346 39.0 36.0 40.0 32.0 40.0 17 36.98331909268106 39.0 36.0 40.0 32.0 40.0 18 37.129173154476526 39.0 36.0 40.0 32.0 40.0 19 37.27489414930391 39.0 36.0 40.0 32.0 40.0 20 37.401457144022004 39.0 37.0 40.0 32.0 40.0 21 37.35033687455706 39.0 36.0 40.0 32.0 40.0 22 37.38239178766884 39.0 37.0 40.0 32.0 40.0 23 37.45572556629364 40.0 37.0 40.0 33.0 40.0 24 37.42393609315729 40.0 37.0 40.0 32.0 40.0 25 37.42708893019883 40.0 37.0 40.0 32.0 40.0 26 37.157753753243185 40.0 36.0 40.0 32.0 40.0 27 36.973572934837954 40.0 36.0 40.0 31.0 40.0 28 36.94539778262201 40.0 36.0 40.0 31.0 40.0 29 37.01765262581725 40.0 36.0 40.0 31.0 40.0 30 36.885271290931755 39.0 35.0 40.0 31.0 40.0 31 36.888975479765406 39.0 35.0 40.0 31.0 40.0 32 36.943879049586094 39.0 35.0 40.0 31.0 40.0 33 36.95604574242086 39.0 35.0 40.0 31.0 40.0 34 36.88384173184837 39.0 35.0 40.0 31.0 40.0 35 36.65903333006594 39.0 35.0 40.0 31.0 40.0 36 36.664225023703096 39.0 35.0 40.0 31.0 40.0 37 36.54019845541693 39.0 35.0 40.0 31.0 40.0 38 36.36856305890946 38.0 35.0 40.0 31.0 40.0 39 36.22972147019048 38.0 35.0 40.0 31.0 40.0 40 36.0483851967769 38.0 35.0 40.0 30.0 40.0 41 35.88271317822733 38.0 35.0 40.0 30.0 40.0 42 35.68869321124251 38.0 35.0 40.0 30.0 40.0 43 35.51837425822105 37.0 34.0 40.0 29.0 40.0 44 35.2201288511567 37.0 34.0 40.0 28.0 40.0 45 35.08716528322706 37.0 34.0 40.0 28.0 40.0 46 34.9553845713448 37.0 34.0 40.0 28.0 40.0 47 34.80918248824821 36.0 34.0 39.0 28.0 40.0 48 34.66723889511044 36.0 34.0 39.0 28.0 40.0 49 34.351036907433446 35.0 33.0 39.0 27.0 40.0 50 34.23017098324692 35.0 33.0 39.0 27.0 40.0 51 34.06896980663652 35.0 33.0 39.0 26.0 40.0 52 32.87077375752839 35.0 32.0 38.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 2.0 13 4.0 14 21.0 15 29.0 16 80.0 17 234.0 18 746.0 19 1632.0 20 3088.0 21 5514.0 22 9285.0 23 14548.0 24 21208.0 25 30664.0 26 43286.0 27 58471.0 28 78978.0 29 104113.0 30 132972.0 31 166114.0 32 203784.0 33 260415.0 34 364644.0 35 519582.0 36 665572.0 37 1110620.0 38 1662239.0 39 306169.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.33910737567477 19.649515138319384 31.41971351566573 16.591663970340118 2 30.42214498053874 19.951578890755837 33.52336869352352 16.1029074351819 3 22.31987598921932 21.298227017105265 37.22259570802643 19.15930128564898 4 20.880705549864114 22.059710115258202 38.623112535272725 18.436471799604963 5 0.0 0.0 100.0 0.0 6 0.0 100.0 0.0 0.0 7 0.0 0.0 100.0 0.0 8 0.0 0.0 100.0 0.0 9 100.0 0.0 0.0 0.0 10 0.0 0.0 100.0 0.0 11 99.29347859087805 0.6612751701721803 0.03591246726457166 0.00933377168518819 12 99.43431791901999 0.4433715040644412 0.08957297994540264 0.032737596970167496 13 97.62438161593958 1.5728272740442208 0.3225008956430544 0.4802902143731409 14 63.28685820560842 24.082345379045684 5.2025020753762785 7.428294339969622 15 31.95185994484747 27.918872522018074 17.599988896628478 22.52927863650598 16 27.62881429003915 17.94957160937298 29.80826732754859 24.61334677303928 17 22.052180641445243 17.713572917488936 30.517720720712905 29.716525720352916 18 22.387658602553948 18.62993069934759 31.624067598713744 27.35834309938472 19 23.867217555818296 18.28569148414777 30.28326609143106 27.563824868602875 20 27.495816718034217 18.467301004594887 25.873787628935734 28.163094648435163 21 29.19910860745505 18.77479499966603 21.55530476586199 30.47079162701693 22 29.138560534627338 20.708950271642248 23.224228250620442 26.928260943109965 23 30.142444112307132 19.51814837400666 20.586743788834696 29.752663724851512 24 28.280703641472133 21.015698258939295 21.87777096346904 28.825827136119525 25 31.115463786961 18.78515236341335 22.665381682733305 27.434002166892345 26 30.38186056073761 20.192157723392462 20.98396690501326 28.44201481085667 27 30.18992837457918 21.399285046968128 20.60525519104305 27.805531387409644 28 29.852212390148186 21.08146838618567 20.085530658750887 28.980788564915255 29 28.872860323923515 21.3684211439422 20.615733997916383 29.142984534217902 30 29.693052498995925 20.21476349384934 21.21217588781431 28.880008119340424 31 30.105698892178456 20.801854263044074 20.998626825225124 28.093820019552346 32 30.708802804989233 22.164289995775512 19.39608068334312 27.730826515892133 33 30.73067991669002 22.731325300159696 19.63488991614352 26.903104867006768 34 29.224611663918292 21.98169158130227 20.42883302697859 28.36486372780085 35 29.74503015693054 23.874799076685264 19.99574949058946 26.38442127579474 36 32.21265038345667 22.43660018233818 19.262632036870134 26.08811739733502 37 31.54155566909524 22.70315049492411 20.31696655890035 25.438327277080298 38 30.17965775592187 24.001984727659455 22.015817099712613 23.802540416706066 39 31.425022315174406 22.527682526849773 22.45915390574105 23.58814125223477 40 30.611266625780814 24.375509085247003 20.366480656278654 24.64674363269353 41 32.28221994564552 23.235695951519904 19.558935915329855 24.92314818750472 42 31.52639262736131 24.347074044741383 19.613880255342846 24.51265307255446 43 31.688172220231902 23.001640349652106 19.792332254513564 25.51785517560242 44 30.893986223144804 23.59551458488571 21.346474636169408 24.164024555800083 45 28.842829173761693 23.857276568503032 20.881555651746222 26.418338605989057 46 28.804661334156833 22.819493009646923 21.056815431604534 27.31903022459171 47 29.122512692975295 21.326419171358854 23.577887982595467 25.973180153070384 48 28.85459180796719 21.28939636694214 22.02246177360746 27.833550051483215 49 30.12080988685838 20.560199791291314 22.25948405755363 27.059506264296672 50 27.847325171776966 21.877701567397033 22.33529926622328 27.93967399460272 51 28.68210787098923 22.658181840262387 21.576782850148724 27.082927438599658 52 29.587466375434484 22.07587940003626 22.07133395731968 26.265320267209574 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 1.5 2 3.0 3 6.5 4 10.0 5 116.0 6 222.0 7 855.5 8 1489.0 9 2162.5 10 2836.0 11 3896.0 12 4956.0 13 5812.0 14 6521.0 15 6374.0 16 7233.5 17 8093.0 18 9405.0 19 10717.0 20 13949.0 21 17181.0 22 22378.0 23 27575.0 24 33191.0 25 38807.0 26 42245.0 27 45683.0 28 46203.0 29 46723.0 30 46183.0 31 45643.0 32 52056.5 33 58470.0 34 60644.0 35 62818.0 36 67068.0 37 71318.0 38 81680.5 39 99001.0 40 105959.0 41 121426.0 42 136893.0 43 166687.0 44 196481.0 45 211049.5 46 225618.0 47 249443.5 48 273269.0 49 292959.5 50 312650.0 51 375480.5 52 438311.0 53 484412.5 54 530514.0 55 539346.5 56 548179.0 57 560549.5 58 572920.0 59 562603.0 60 552286.0 61 482874.0 62 413462.0 63 361841.5 64 259868.0 65 209515.0 66 186290.0 67 163065.0 68 132685.5 69 102306.0 70 89604.5 71 76903.0 72 54539.0 73 32175.0 74 20481.5 75 8788.0 76 6213.0 77 3638.0 78 3369.5 79 3101.0 80 1603.0 81 105.0 82 57.5 83 10.0 84 7.5 85 5.0 86 8.5 87 12.0 88 6.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 5764015.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.69012192310263 #Duplication Level Percentage of deduplicated Percentage of total 1 79.06860993246192 6.080472506708758 2 7.9988529086405675 1.2302430822482013 3 2.951959951286907 0.6810279581253725 4 1.7610111846392142 0.5416956287129182 5 1.2011679178199444 0.4618563869077347 6 0.8638854949321984 0.39860308701770797 7 0.6716249869267396 0.3615414625248186 8 0.4762573790599839 0.2929981849398866 9 0.38932802781136133 0.26945820017554145 >10 2.319433922523748 3.475687530314602 >50 0.29615329668528817 1.6205426449988907 >100 1.068319376894016 24.57408325660861 >500 0.7350461680143026 39.162867796842264 >1k 0.19811881340580043 20.750130456470085 >5k 2.3063889802770712E-4 0.09879181740460083 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0022206743042826917 0.0 0.0 0.0 0.0 12 0.008587763911093222 0.0 0.0 0.0 0.0 13 0.01795623363228583 0.0 0.0 0.0 0.0 14 0.06561398608435266 0.0 0.0 0.0 0.0 15 0.10556877454343891 0.0 0.0 0.0 0.0 16 0.12290044352764523 0.0 0.0 0.0 0.0 17 0.13802878722557108 0.0 0.0 0.0 0.0 18 0.15445830727366255 0.0 0.0 0.0 0.0 19 0.17359427413009856 0.0 0.0 0.0 0.0 20 0.19399671930069579 0.0 0.0 0.0 0.0 21 0.21566564278545425 0.0 0.0 0.0 0.0 22 0.24208819720281782 0.0 0.0 0.0 0.0 23 0.2627855756794526 0.0 0.0 0.0 0.0 24 0.28468003639823974 0.0 0.0 0.0 0.0 25 0.3104433281315194 0.0 0.0 0.0 0.0 26 0.34017954498730485 0.0 0.0 0.0 0.0 27 0.36708787190873027 0.0 0.0 0.0 0.0 28 0.3960260339364141 0.0 0.0 0.0 0.0 29 0.433708101037211 0.0 0.0 0.0 0.0 30 0.48067189276918953 0.0 0.0 0.0 0.0 31 0.5186315441580218 0.0 0.0 0.0 0.0 32 0.5435967810631999 0.0 0.0 0.0 0.0 33 0.5666709750061372 0.0 0.0 0.0 0.0 34 0.5887389259049465 0.0 0.0 0.0 0.0 35 0.6098006337596277 0.0 0.0 0.0 0.0 36 0.6334126472606334 0.0 0.0 0.0 0.0 37 0.6540059316292549 0.0 0.0 0.0 0.0 38 0.6758830433300399 0.0 0.0 0.0 0.0 39 0.7004145547851628 0.0 0.0 0.0 0.0 40 0.72647277982448 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCTTAAT 75 0.0 46.000004 25 CGTATCT 75 0.0 46.000004 34 CGATTCA 75 0.0 46.000004 17 CGTACTA 75 0.0 46.000004 21 ACACGCG 50 1.6370905E-11 46.0 41 CGACGTA 30 1.8627143E-6 46.0 32 CGAAAAT 30 1.8627143E-6 46.0 27 ACGTTAG 85 0.0 46.0 41 ATAGCTA 80 0.0 46.0 14 CCAATTA 20 6.313575E-4 46.0 33 CGTCTAC 110 0.0 46.0 20 CAATTCG 55 1.8189894E-12 46.0 17 TCGATCA 25 3.4188753E-5 46.0 36 ATACTCG 25 3.4188753E-5 46.0 25 GTAATAC 85 0.0 46.0 39 CGTTAAT 260 0.0 46.0 18 CGTTAAC 60 0.0 46.0 34 ACGATTT 55 1.8189894E-12 46.0 34 ACGATTC 100 0.0 46.0 43 ACGATAC 55 1.8189894E-12 46.0 21 >>END_MODULE